Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g01090 ATGCCTTTCTCCATCCGAGAGTATGCTTTGAATATGAGAGGCACGGATTTAAAGAGAAGCTGGCCGTTTAGCGAGAACGTGAAGAAAGAAGTGGCACAAGCTTTGCTCCCACCAATGGATGTCAGGAAATTTCGTTGGTGGTCTCATCAACAAACTGATTGTGGAGGTGTAGTGGAGGAGAAGGAGGTTGTTGTTGTTGACAGAATTCAAATGCAGAAGATTTGTCCGGTTTGTGGGGTTTTTGTTGCTGCTACTGTCAACGCTATGAATGCTCATATTGATAGCTGTTTAGCTCAAACCACTAAGGAAAGGCCAAGGAATAAAGGAGGAGGAGGAGGAGGAGGAGGGGCAAAATCAAGAACGCCTAAAAAGAGATCAATTGCAGAAATCTTCGCAGTGGCTCCGCCTGTAAAAACAATGATTATTGGTAATGATTGTGAGGAGGGAGAAAAAGGCATTGGGAAGCAAATGATTCGAGACAAGCTCAAAGCTACATCGTTGGCTAGGAGTCTTGTCTCTGCAATGAAGACAATCAAGGCGAAGAACACCAGAAATGAAGAAGAAATGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAATAAGAACCTTGGAGATGAGCAACTATGCAAGAAGGGGGAGAGAAACCACAAGGATGTTTCAGCTCGTTGTTGTAAGAAACCATGTTTTAAGCGTTTGTCTAGACCAAAAAGGAAAAAACTAGTGAAGAAATCCAATGTAGTTGGCAGGCAACAGAGGCCATTGGCTCCACTTAGGAGCATTTTGAAGCATAGTGTCAAAGAAATTTCTGAGACAAGAGGCAGCAACCAAGCTTCCAACAATGGTGGTCAAAAGTATGGTAAGCGTGTTAGCTTCTGGGATAAGGATGATGTTCTTGGTCCAACCACTGGAGCGTTATCTGATACCTTTGAACAAAATGGCTGCAATCCTTTTCAAGCCTCAGAAGGAAGCACTAAGTCAGGCGAAAGTGATAAAGGAGTGGCTTCAATGGAGGTTGGTGTAGAAGACGACGTCGTTAGCGTTAGCCCCCGACACGACATTGATAGTCAAAGTTGGGACAATGCGAAGCATTCGACTGAAAAGTTGATATCGACAAATCGGGTTATTCCTCGTGATCAAAATGATTTGCATTTGTTTGACCATGTCTATGTAGATGCACCTCAGAAGCTGCCACCAGTGGCTTCTGCTACGCCTGCTCTATTAGCTGCTGCACAAGAAGAAAGGCAATATGGCCATGTGAGAACTCAATGTCGAGCTCATTCTCTCTATGGCTCAAATACAAGCAGAGTTCCTTCTTCTTCTTTAAGTGAAAATGCTGGTGGCAGATTTCTTAATCTGGCGCAATCTTCTGATAAGGACGCTCGATGCTCGTTTCCGAACTGGGAGCAAAGTGCGGTCGCCCACAAAGAGAAGGGTGTGAATGATGGTTTTTTCTGCCTGCCATTGAACTCAAAGGGTGAACTGATACAGCTAAATTCAGGTTTGGTTAATAGGTTTGATCAAATGAATGAAGCCAATAACACTATGGCTTGTTCTAGCAGGATACCGGTATGCAGTCTCGTCCTGCCACGACGCACCCGGGATTATTTCATAGATAACGAGAAGCTCCTTGTTGATACAGAACTTACAAGAAACCAGTTGACTTTATTTCCATTGCATAGTAATGTGCAAGAAAATCAAAACCAATATTTGTCAGCTAGATTCGACGTCACCGAGCCTGGAACTTCCGAAAGGGGAACTGAATCAGGTCGGTTTTTGCACTCGAACTTGATGGAATCTCCATTTTACAGAAGCAGATACTATGGAAGTACAGAGATTAATCCTGAAAGTTCAAGTAGCGTGTGTGCGAATCCCGCTCGACAAACGATGCGGTTGATGGGCAAAGATGTCGCTGTTGGTGAACATGGGAAAGAAGTTCAAGAACCTGAGGTTATAAACTTTTGGAAGAACTCAACTTTAATTGACAACTGCTTGACCAATCCTATCCAAGAGAATCCCATGAGAAAAAGAAACTTTCTGCAAGATAGGGAGTTGCATCATCCATCAAAAGGAGAAGCCTTGTTTTATCATCCTGCAGCCTTTCATCATCCATCGAATGCTCCACAAGTTCGGTACCCCCATCTGCACCTCAATCGAACGTATCAAAGACCCGACTCTGTCATCAACTTAAACGAAAGGTTCAACAACAACGTCCATGTTTCGACCGATGTCTTTAATAACACGGCACCGAACTTTCAAGCACCCTTCATTTCTGGTCCGGAAACGCTAAGGTTTGGTTCACAGCCATCGGCATTTTCTACTTCTTACCACATGTATCCAAATAGATATGAAAGTTGTTTCGAATTTGGTTTCGACCGGAAACTACGTCCCGAAAAACCAGGAACCTTTAACTTCCCTTTCTTGCAGCCAGATGATCATGGAAATGCTATCCAGGTCCCTTGGTTTCATAGTTCTAAGAGCCTTCCTCCATGGATGTTACATGATCACCAACGGGAAGCAGCTCCAACCACAAATGGATACTATTATCCATTTATTTCTTCTGCCACAGATGTTCTCATTAGCCCTTCTTCCATGCATCACCGGCTTGAAGCTGCCTATCCTTGCAGCACAATGCCCTATTTTCAACCAATGCCTGTTGCTCCTAGAGTACTTCAATCGCCCTCTATTGCCAACCCAGGCCATGAAACTAGAATGAGCTTTGAAGACAGATTGAAGTTCAATACTTTGAGTGTCAAGCAACCAGAGCTAGTCAATTCGAGGAAGCGTCAAAAGATGTCAAATTTAGAAACGAACAATACTAGAGAATTCAGCGATGATCAACTGCGATATAACCCGGCAACAGCGAAAATTCCTGCTAACTGGGAGAAGGCCGTTAATTTAACAGGAAATATCTCAAATGTGGCTCAAACTGATGGAGTACCGGCAAGATCAGGCCCTATCAAGTTAACAGCAGGAGCTAAACACATCCTGAAACCAAGTCAGAGTATGTATTTAGATAATACTAAGCCTACTTATTCAACAATTCCTTCTGCTGGATTAGTTCATAGTGTTAGCTTGGCTGGATCTCAGAAGAAGTCAACTAAACTTTTGGTGGAAAGTCTGGCTGATGTAATGGATGTGCCGGAGGCAGTTATAGTAAAATCTAGCAGATTGAAGTCCGTTGTGTGGAACGATTTTGATAGAATAAAAAAGGGTGACACCTTTGTTGCTGTATGTAGGCATTGTAAGAAGAAACTGAGTGGATCAAGTACCAGTGGGACTTCTCATTTGAGGAATCACTTAATTAGGTGTCAGAGAAGATCTAATCATGGTATGTCTCAATTTATTTCATCCAGGGAAAAGAAAAAGGAAGCAACATTGGCTATCACTAATTATGTTGATCAGGGGCAGAAAAAAGATGATGTTCTAAATCTTGTTAATATTAGATTTGACCCAGAGCAAGTGAAAGACGAAACAAATAATACCCTGAATTACAATTTCGATCAGCGACGAAGTCGATTCGATCTTGCCCGGATGATCATCTTGCATGGTTATCCATTGGGCATGGTTGAGCATGTTGGGTTTAGAGTATTTGTTAAAAATCTGCATCCCCTGTTTGAACTTGTATCATGCAATAGAGTTGAGAGTGATTGTTTGGAAATATATGTGAAAGAGAAACAAAAAGTAAACGAATTATTGGATAAATTGCCTGGTAAAATCAGCCTCAGTGCTAATATGTGGACTGCCACAGATCATTTGGAATCGTCATATCTGTGTCTAACAGCCCACTACATTGATGAGTCCTGGCAGTTAAATAAGAAGGTTTTGAATTTTATGTTTGTTGATCCTTCTCATACTGAAGATTTGCATTCGGATGCTATCATGACTTGTCTGATGGATTGGGATATTGATAGGAAGTTGTTTTCAATGACATTTGATTGTTCCTCTAACAGTGACTATATATCATTACGAATCAGAGACAGACTATCACAGAATAGGTTTCTATATTGTAATGGTCAATTATTTGATGTTAGCTGTGCGATAGATCTTCTGAATTTGATGGCTCAAGATGCTTTGGAAGCATTATGCGACATTCTCCCTAAAATTCGTGACAGTATTCAATGTATTAAACAGTCTCGAGAAGTGCAAGCTAAGTTCAATGAGATGGCCGAGCAAGTTAAAGTTCAGAGCCAAAAGGGTCTGTCTGTGGACAATCCATCTCAGTGGAACTCGACTTATGCGATGCTCGGAGCAGCTATAGAATATCGAGAAGCATTTTCCCTTTTGCAGGAAAGTGACGTTGGCTACTCAGCATGCCCAACTGAAGAGGAATGGGGTAGGACCTGTGTGATTACAGGCTTTCTGAAGTTCTTCTTTGAAGTGACTAATATTTTAACGAAGACCAACTTTCCTACTTCAAATATATTTTTCCCTGAGCTATGTGACGTACACTTGCAGCTGATGGAATGGTCCAAGAATTCAGATGATTATGTCAAGGCCTTGGCATTCAAGATGCGGACCAAGTTTGAAGAATATTGGGATAAATGTGGGTTGGCTCTAGCAGTTTCTGCCATGTTAGATCCTCGGTTCAAAATGAAGCTTGTAGAGTACTATTATCCACAAATATATGGCGCTGTTGCTGTACAGAGGATTGATGATGTTGTGAACTGTGTGAAGGCGCTTTACAACGAACATTCGATCTGCTCGCCGTTAGCTTCAATCGATCAAGGTCTTGCCTGGCAAGTTGGTAGTAGTAGTTCAGGGAAGGATGCAAGGGACAGGTTAATGGGTTTTGACAAGTTTCTCCATGAATCCTCCCAGAGTGAAGGCAGTAAATCAGATCTGGACAAGTACCTAGAGGAGCCTTTGTTTCCTCGTAATGTTGATTTCAATGTGTTGAACTGGTGGAAGGTTCACACTCCGAGATATCCGATCTTGTCGATGATGGCTCGTAATGTGTTGGGGATTCCGATGTCGAAAGTTGCATCAGATTGTGCATTCAAGAGTGGAAGAAGGGTGGTTGATCGAGAATGGAGTTCGCTGAAACCAGCTACAATTCAAGCCTTGGTATGGAGTTTTCCGAGAATGATTGAAGTTCCAGGAGTTCAGTCTCTCCCGAATGATTTAAGTTTCGGGCTTAAGCTTGGATGGGTTCCCCGGGGGAGAGAAATAAGATTCGCAATGGAAACAAGATTTAGTGTCTGGGGCATGCGCGAGGAAATGGGGAATTGGGATGAGGAACAAAGGGAGGTGCCGATGTGGTTGGTGGGGTTCCGTAACAGGGACACGTCTGTCATTGCCTCATTAGGAAGCATAAAGGGAAGCAAAAAGGTACCGCCTGGGCAAATGGGTCTGCCCTGGATTGGCGAAACCATGGTTTTCTACAGAGCCCAACGTAAAAACAGGTTGTTCGAAGAGTTTGTTGGGCCTCGAGTGGCTAAATATGGCAAAATCTTCAAAACAAGCTTGATGGGGTCGCCGACGGTGGTCGTAAATGGAGCTGAAGCCAACAGATTTTTCTTGTCCAATGAGTTTAAGTTGGTGGTAAGCTCGTGGCCGTCCGCCTCTGTTCAGCTGATGGGCGAAGAATGCATCATGCAGAAGCAAGGTGAAAGCCACCGATGTGTGCGTGGCCTTATTGCCGCAAGCCTTGCCAGTTCGAGTCTCGAAGCTATGATGCCTAAATTGTGCACGACAATTCAGCTTTATTTGGACACAAAATGGCTTGGCCATGATATAATTAGTCTCTACCACTCGGCAAAAGTATTGACGTTTACCATAGTGTTTGAGTGTTTGATGGGTATCAAAGTGGAGCCACGCATGTTGACGACATTCGAGAGGGTTTTGGAAGGAGTTTTTGCTCCACCGTTCAGCTTTCCAGGCACACGGTTTTCGAGAGCGAAGAAAGCAAGGATGGAGATAGGGAAAATGCTGAGGGAGGTGGTGAGAGAGAAGAGGAGGAGAATTGAAGAAGAGCCCGTAGAAGAAGAATGTGAGTTGTTGCTTTCAAGGATGGTGAGAGCAATGATAAGAGGGGAGATCAGTGAAGTGGAAGTGGTGGACAATGTGGTTTTGCTTGTTTTTGCAGCTCATGATACAACCTCCTTCGCCATTGCCATGACTTTCAAAATGTTGGCTCAGCAGCCAAACTGCTACTCACTTCTTCTCCAGGAACATGCTGACATAGTGAGAAGCAAGGGAGCAGGCCAGAATATGACGATGGAAGATATAAAGAAGATGAAATATACTTGGCAGGTAGCTCGTGAGAGCATTCGACTGTTTCCTCCTATATTTGGTTCATTCAGGAAAGCCATTACAGACATTGAATATGAGGGATTTTTCATTCCCAAGGGATGGAAGGTCTTGTGGACGACGTATGGAACGCATCTCGAAGACAAGTATTTTGAAGATCCATTGAGTTTCAAGCCAAGCAGATTTGAGGAGCCTGTTTCCCAGTATGTCTATGTTCCATTTGGAGGAGGGCCAAGAGCTTGTGCAGGCTACCAGCTGGCGAAATTGAACATCCTCATCTTTATACACTTGGTTGTAACTCGTTATGATTGGAGTTTAGTCCACCCAGATGAGACAATCATAATGGATCCCCTCCCTATCCCTTCTCATGGAATGCCAATTAAGATTTCTCCAAAATCAGAAGCTCGCCCCAATGTTCAGCAAATGTAA 6690 43.33 MPFSIREYALNMRGTDLKRSWPFSENVKKEVAQALLPPMDVRKFRWWSHQQTDCGGVVEEKEVVVVDRIQMQKICPVCGVFVAATVNAMNAHIDSCLAQTTKERPRNKGGGGGGGGAKSRTPKKRSIAEIFAVAPPVKTMIIGNDCEEGEKGIGKQMIRDKLKATSLARSLVSAMKTIKAKNTRNEEEMRRRRRRRRKKKKKKNKNLGDEQLCKKGERNHKDVSARCCKKPCFKRLSRPKRKKLVKKSNVVGRQQRPLAPLRSILKHSVKEISETRGSNQASNNGGQKYGKRVSFWDKDDVLGPTTGALSDTFEQNGCNPFQASEGSTKSGESDKGVASMEVGVEDDVVSVSPRHDIDSQSWDNAKHSTEKLISTNRVIPRDQNDLHLFDHVYVDAPQKLPPVASATPALLAAAQEERQYGHVRTQCRAHSLYGSNTSRVPSSSLSENAGGRFLNLAQSSDKDARCSFPNWEQSAVAHKEKGVNDGFFCLPLNSKGELIQLNSGLVNRFDQMNEANNTMACSSRIPVCSLVLPRRTRDYFIDNEKLLVDTELTRNQLTLFPLHSNVQENQNQYLSARFDVTEPGTSERGTESGRFLHSNLMESPFYRSRYYGSTEINPESSSSVCANPARQTMRLMGKDVAVGEHGKEVQEPEVINFWKNSTLIDNCLTNPIQENPMRKRNFLQDRELHHPSKGEALFYHPAAFHHPSNAPQVRYPHLHLNRTYQRPDSVINLNERFNNNVHVSTDVFNNTAPNFQAPFISGPETLRFGSQPSAFSTSYHMYPNRYESCFEFGFDRKLRPEKPGTFNFPFLQPDDHGNAIQVPWFHSSKSLPPWMLHDHQREAAPTTNGYYYPFISSATDVLISPSSMHHRLEAAYPCSTMPYFQPMPVAPRVLQSPSIANPGHETRMSFEDRLKFNTLSVKQPELVNSRKRQKMSNLETNNTREFSDDQLRYNPATAKIPANWEKAVNLTGNISNVAQTDGVPARSGPIKLTAGAKHILKPSQSMYLDNTKPTYSTIPSAGLVHSVSLAGSQKKSTKLLVESLADVMDVPEAVIVKSSRLKSVVWNDFDRIKKGDTFVAVCRHCKKKLSGSSTSGTSHLRNHLIRCQRRSNHGMSQFISSREKKKEATLAITNYVDQGQKKDDVLNLVNIRFDPEQVKDETNNTLNYNFDQRRSRFDLARMIILHGYPLGMVEHVGFRVFVKNLHPLFELVSCNRVESDCLEIYVKEKQKVNELLDKLPGKISLSANMWTATDHLESSYLCLTAHYIDESWQLNKKVLNFMFVDPSHTEDLHSDAIMTCLMDWDIDRKLFSMTFDCSSNSDYISLRIRDRLSQNRFLYCNGQLFDVSCAIDLLNLMAQDALEALCDILPKIRDSIQCIKQSREVQAKFNEMAEQVKVQSQKGLSVDNPSQWNSTYAMLGAAIEYREAFSLLQESDVGYSACPTEEEWGRTCVITGFLKFFFEVTNILTKTNFPTSNIFFPELCDVHLQLMEWSKNSDDYVKALAFKMRTKFEEYWDKCGLALAVSAMLDPRFKMKLVEYYYPQIYGAVAVQRIDDVVNCVKALYNEHSICSPLASIDQGLAWQVGSSSSGKDARDRLMGFDKFLHESSQSEGSKSDLDKYLEEPLFPRNVDFNVLNWWKVHTPRYPILSMMARNVLGIPMSKVASDCAFKSGRRVVDREWSSLKPATIQALVWSFPRMIEVPGVQSLPNDLSFGLKLGWVPRGREIRFAMETRFSVWGMREEMGNWDEEQREVPMWLVGFRNRDTSVIASLGSIKGSKKVPPGQMGLPWIGETMVFYRAQRKNRLFEEFVGPRVAKYGKIFKTSLMGSPTVVVNGAEANRFFLSNEFKLVVSSWPSASVQLMGEECIMQKQGESHRCVRGLIAASLASSSLEAMMPKLCTTIQLYLDTKWLGHDIISLYHSAKVLTFTIVFECLMGIKVEPRMLTTFERVLEGVFAPPFSFPGTRFSRAKKARMEIGKMLREVVREKRRRIEEEPVEEECELLLSRMVRAMIRGEISEVEVVDNVVLLVFAAHDTTSFAIAMTFKMLAQQPNCYSLLLQEHADIVRSKGAGQNMTMEDIKKMKYTWQVARESIRLFPPIFGSFRKAITDIEYEGFFIPKGWKVLWTTYGTHLEDKYFEDPLSFKPSRFEEPVSQYVYVPFGGGPRACAGYQLAKLNILIFIHLVVTRYDWSLVHPDETIIMDPLPIPSHGMPIKISPKSEARPNVQQM 2229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9372526 9386659 + CmoCh19G010900.1 Cmo19g01090 404250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g01090 2229 Pfam BED zinc finger 1063 1113 IPR003656 GO:0003677
Cmo19g01090 2229 Pfam hAT family C-terminal dimerisation region 1617 1693 IPR008906 GO:0046983
Cmo19g01090 2229 PRINTS E-class P450 group I signature 2127 2151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g01090 2229 PRINTS E-class P450 group I signature 2021 2038 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g01090 2229 PRINTS E-class P450 group I signature 2168 2191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g01090 2229 PRINTS E-class P450 group I signature 1815 1834 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g01090 2229 PRINTS E-class P450 group I signature 2158 2168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g01090 2229 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 1-LIKE 1049 1695 - -
Cmo19g01090 2229 MobiDBLite consensus disorder prediction 190 204 - -
Cmo19g01090 2229 PRINTS P450 superfamily signature 2032 2049 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g01090 2229 PRINTS P450 superfamily signature 2088 2099 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g01090 2229 PRINTS P450 superfamily signature 2159 2168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g01090 2229 PRINTS P450 superfamily signature 2168 2179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g01090 2229 SMART bed5 1060 1110 - -
Cmo19g01090 2229 Pfam Cytochrome P450 1782 2202 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g01090 2229 SUPERFAMILY Ribonuclease H-like 1229 1694 IPR012337 -
Cmo19g01090 2229 SUPERFAMILY Cytochrome P450 1779 2218 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g01090 2229 MobiDBLite consensus disorder prediction 102 128 - -
Cmo19g01090 2229 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 2161 2170 IPR017972 GO:0005506|GO:0016705
Cmo19g01090 2229 PANTHER BED FINGER-RELATED 1049 1695 IPR045259 -
Cmo19g01090 2229 Pfam Domain of unknown function (DUF4413) 1470 1568 IPR025525 GO:0003677
Cmo19g01090 2229 Gene3D Cytochrome P450 1774 2219 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo19g01090 2229 ProSiteProfiles Zinc finger BED-type profile. 1060 1113 IPR003656 GO:0003677
Cmo19g01090 2229 SUPERFAMILY beta-beta-alpha zinc fingers 1063 1109 IPR036236 -
Cmo19g01090 2229 SMART c2hc_5 72 97 IPR006642 GO:0003677|GO:0006281
Cmo19g01090 2229 MobiDBLite consensus disorder prediction 178 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00658 Cmo-Chr9:3300980 Cmo19g01090 Cmo-Chr19:9372526 0 dispersed
Cmo12g01218 Cmo-Chr12:10880168 Cmo19g01090 Cmo-Chr19:9372526 5.90E-107 dispersed
Cmo09g00944 Cmo-Chr9:4959270 Cmo19g01090 Cmo-Chr19:9372526 9.99E-92 transposed
Cmo11g02032 Cmo-Chr11:13846243 Cmo19g01090 Cmo-Chr19:9372526 0 transposed
Cmo11g02030 Cmo-Chr11:13839053 Cmo19g01090 Cmo-Chr19:9372526 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g01090 - - cpep:111776324 1969.51