Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g01112 ATGGATGGGTTTCATAAGCTCACATGTCACTTTCACAGGGTACGTTTCCATTATGGTCATCCTGATGTATTTGACAGAATCTTCCACATAACTAGGGGTGGCATCAGTAAAGCTTCTAGAGTCATTAACCTAAGCGAGGATATATTTGCTGGATATAATTCAACTCTTCGTGGGGGGTTTGTCACACACCATGAATACATCCAAGTAGGCAAGGGGCGAGATGTGGGCATGAATCAAATATCACTTTTTGAGGCAAAGGTTGCAAATGGGAATGGAGAGCAGACACTTAGTCGTGATGTTTATAGGCTTGGGCGTCGTTTTGACTTCTACCGAATGATGTCCTTCTACTTCACAACTGTTGGATTCTACTTCAGTAGTATGGTGACTGTGCTGACAGTATATTTATTTTTATATGGACGTTTATACATGGTTATGAGTGGTGTTGAAAGGGAGATTCTTGAAAACCCTTCCATACGTCAGACGAAGGCTCTTGAAGAGGCTTTGGCTACCCAGTCTGTATTTCAACTAGGCTTGTTGCTGGTACTACCAATGGTTATGGAAATTGGCCTTGAAAAAGGATTTCGCACTGCCCTTGGTGATTTTGTTATCATGCAGCTGCAACTAGCTTCTGTTTTTTTCACATTTCAGCTTGGAACTAAAGCCCACTTTTATGGTCGAACAATCTTGCATGGAGGTTCTAAATATCGAGCTACTGGTCGTGGGTTTGTTGTTTTTCATGCAAAATTTGCTGATAATTACAGGCAGTACTCAAGAAGTCACTTTGTCAAAGGCTTGGAACTTTTTATTCTGCTCCTTATTTATCAAATCTATGGAAATTCATATCGCAGTTCAAAACTTTATCTATTCATCACTTTCTCCATGTGGTTTCTGGTTGCCTCCTGGTTGTTTGCTCCCTTTGTGTTCAATCCATCTGGATTTGACTGGCAAAAGACGGTTGATGACTGGACAGATTGGAAAAGGTGGATGGGAAATCGTGGTGGAATAGGGATCTCCCATGACAAAAGTTGGGAATCTTGGTGGGATGGAGAACAGGAACACTTGAAAAGTACAACACTAAGGGGAAGAGTGCTAGAGATAATACTTTCTTTACGATTCCTGTTATACCAATATGGAATTGTTTACCACCTTGATATATCTCATAGCATTAAGAGCTTCTGGGTTTATGGACTTTCTTGGGTTGTCATGTTAATTGCTCTTGTTGTCTTAAAGTTGGTATCCATGGGCAGACGAAAATTCGGTACCGACTTCCAGCTCATGTTCAGAATACTAAAAGCTCTTCTCTTCCTCGGTTTCATGTCGGTCATGACTGTCTTGTTTGTAGTATGGGGCCTCACAGTATCAGATCTATTTGCAGCTCTCCTTGCGTTCTTGCCTACTGGATGGGCCATCCTTCTGATTGGGCAGTCATGCAGACCGATGATGAAAGGCGTAGGATTCTGGGAATCAATAAAAGAGCTTGCGAGAGGGTATGAATACATCATGGGTCTCGTTATTTTCATGCCCATAGCCATCTTGTCCTGGTTCCCATTTGTATCAGAGTTCCAAACACGTTTGCTGTTCAATCAAGCATTCAGCAGAGGAACTATATAA 1611 41.71 MDGFHKLTCHFHRVRFHYGHPDVFDRIFHITRGGISKASRVINLSEDIFAGYNSTLRGGFVTHHEYIQVGKGRDVGMNQISLFEAKVANGNGEQTLSRDVYRLGRRFDFYRMMSFYFTTVGFYFSSMVTVLTVYLFLYGRLYMVMSGVEREILENPSIRQTKALEEALATQSVFQLGLLLVLPMVMEIGLEKGFRTALGDFVIMQLQLASVFFTFQLGTKAHFYGRTILHGGSKYRATGRGFVVFHAKFADNYRQYSRSHFVKGLELFILLLIYQIYGNSYRSSKLYLFITFSMWFLVASWLFAPFVFNPSGFDWQKTVDDWTDWKRWMGNRGGIGISHDKSWESWWDGEQEHLKSTTLRGRVLEIILSLRFLLYQYGIVYHLDISHSIKSFWVYGLSWVVMLIALVVLKLVSMGRRKFGTDFQLMFRILKALLFLGFMSVMTVLFVVWGLTVSDLFAALLAFLPTGWAILLIGQSCRPMMKGVGFWESIKELARGYEYIMGLVIFMPIAILSWFPFVSEFQTRLLFNQAFSRGTI 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9453738 9456827 - CmoCh19G011120.1 Cmo19g01112 404272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g01112 536 PANTHER GLYCOSYL TRANSFERASE, FAMILY 48-RELATED 12 534 - -
Cmo19g01112 536 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 12 534 - -
Cmo19g01112 536 Pfam 1,3-beta-glucan synthase component 13 365 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo19g01112 Cmo-Chr19:9453738 Cmo02g00631 Cmo-Chr2:3918920 0 dispersed
Cmo01g01337 Cmo-Chr1:10592813 Cmo19g01112 Cmo-Chr19:9453738 0 wgd
Cmo11g02049 Cmo-Chr11:13887543 Cmo19g01112 Cmo-Chr19:9453738 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g01112 K11000 - csv:101211498 1041.57