Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo19g01124 | ATGTCCATGACGTCTTCGTCTTCAGGTTTCATCTTCGCTCTTTGTGCTATTGCTTCCATCGTCGGCCACCTGGTTGTTTTGTCTGAAGCTCAAAATTCAACTCAACCCACCACCGATCCTGACCAAGCAAGAGCTCTGAATTCCGTATTTAGTCAATGGCGTATATCGGCGCCATCAGGGGCATGGAATATAAGCGGGAATTTGTGCAGTGGGAGGGCAGTCGACACTACCACCCCCATTGACATTAATGGAAACCTCAATCCTCTTATAAAATGCGATTGCTCAGCCAACAACGGTGCAACTTGCCTCATTACTCAACTGCACGTTTATGCAATAAACGTTGTTGGTGTACTTCCACCAGAGCTATGGACATTAACTTCCCTCACCTATCTGAAGTTGGATCAAAATTTCTTGACTGGAACGCTATCTGCATCTGTTGGTAATCTCACAGAATTGCGAACGTTGAGCCTGGGCATTAATGCATTATCAGGGGAACTTCCGAAGGAACTTGGATCTCTTTCTAAACTGGAACTGTTATACTTTGATAGCTCTGGAGTTTCTGGTGGTATTCCTCAATCATTTTCACGCCTAAGAAACTTGCGTACAGTATGGGCATCAGACAATGAATTCAGGGGCAGAATACCTGATTTCATCGGGAGTTGGACACAGCTCACAACTTTGAGAATAGGTGATTTATCCAATGGGAGCTCTTCTCTAGCATTCATCAGTAATATGACATCTCTAACTATCCTGGTGTTGAGAAATAATAATATGACGGGTTCAATTCCATCCAACATTGGAGAATTTCGTAGACTTACCCAGCTGTTTCTTGGAAATAATAAGTTAAATGGGACCCTACCTACACAGAAGAGTGCATCACTTCTTAATATAGACTTGTCATATAATGATTTATCAGGGAGCTTTCCTTCTTGGATCAACCAGCAAAACTTACAGATAAATTTAGTAGCCAACAATTTTAAAATTGAAGGTTCAAGTATCAGCAGTGGTTTGCCTTCTGGATTGCATTGTCTTCAACGCAACTTTCCTTGTAATCGAGACCGTCCAATATATTCTGATTTTGGGATCAAGTGTGGAGGTCCTCAGTTCAGAAGTTCATCAGGGATTTTGTTTGAAGCGGAAAATGAGACTCTTGGTCCAGCTACGTACTTTGTTACTGAGTCAAATAGGTGGGCCGTTAGTAATACGGGATACTTCACTGGGAGCAACAATGTTCAATACATGGCCTCATTGTCTCAATCCCCAAACACCCTTGTGGGAGAACTTTATCAGACACAGCGACTATCTGCTTCATCATTGAGATACTATGGACTAGGACTTCAGAATGGCAACTACACTGTGAACCTTTATTTTGCAGAAATAGTTTTTCCAAATTTTAATACATGGCAAAGCCGTGAGAGGCGTCTCTTTGATATATATATACAGGGAAAACGTGTCTTACAGAATTTTGATATTAGAAAGGAGGCAGGTGGGTCTTTCCTTGCTGTCCCAATGAACTTTACGGCTGAAGTTACAGAAAACTTCCTGGAAATTCATCTCTTTTGGGCGGGGAAAGGTACTTGCTGCATACCTAATCAGGGTTCTTATGGACCCTCTGTTTCAGCCATCAATGCTACCCCGGATTTTGAACCATCTGTCAGTAACATACCTCCAAGTACTGAGGAGAATAATAAAACGGGCCAAATTGTAGGGAGGGATAATAGAACGGGCCTAATTGTAGGACTCGTTGTTGGGTTAGGATCTGTTTTCTTTCTCGTTTTTGGCGCAGTTTTCCTTGTCGTCCGGAGAAGGAAAAGGCGTCTTGCCTATGAAGATGAAGAGCTCCTGGGGATAGATGCTAGACCGTACACTTTTAGTTTTTCTGAACTAAGGGTTGCTACAAGCGACTTCAATTCATCCAACAAACTTGGTGAGGGAGGATTTGGACCTGTTTACAAGGGAACACTATGCGATGGAAGAATGGTTGCTGTGAAGCAACTCTCAGTGGCATCCCACCAAGGAAAGAGCCAGTTTGTTGCTGAGATTGCTACAATATCTGCAGTGCAGCATCGCAATCTTGTAAAACTATATGGATGTTGCATTGAGGCCGATAAACGTCTCCTTGTTTATGAGTTTCTTGAAAACAAGAGTCTTGACCAAGCATTATTTGGAAAAAAACATTTGATTATTGATTGGGCAAAACGTTTTGAGATATGCGTGGGTGTAGCAAGGGGTCTCACTTACCTTCATGAGGAATCAAGACTTCGCATAGTGCACAGAGACGTTAAGGCCAGTAACATCCTGCTTGATGGTAATCTGATTCCTAAAATTTCAGATTTTGGCTTAGCCAAACTTTACGACGACAAAAAGACTCATATAAGCACCCGTGTTGCTGGGACAATTGGTTATCTTGCACCTGAGTATGCCATGCGTGGCCGCCTTACGGAGAAAGCTGATGTCTTTGGATTTGGCGTTATGGCTCTTGAAATTGTCAGTGGAAGACCGAATTCAGACCCAAGCTTAGAGGAAGACAAAATTTATCTTCTGGAATGGGCATGGTACCTCCACGAAAACAACCGTGAACTTGAGATGGTGGATTCTGAACTATCAGAGTTCAGCAGGGAGGAAGTAAAAAGGGTGATTGGTGTAGCTCTTCTGTGCACTCAAACATCCCCCGCTCTTCGGCCATCGATGTCCCGCGTAGTAGCAATGCTGACTGGAGATGTTGAAGTGGCCGCTGTGACTTCCAAACCAGGATACCTGACAGATTGGAAATTTGATGACATTACAAGCTTCATTGATAACGCATCAACTGAAGAACTTGATACTAGCCGCTATGCATCAACAAGTTCTAATGTTGTTGATACAAAGCATTCGCCAGCCAAACCACTGCTCCATGAATCATTTGGGGCCGGGTAG | 2916 | 43.11 | MSMTSSSSGFIFALCAIASIVGHLVVLSEAQNSTQPTTDPDQARALNSVFSQWRISAPSGAWNISGNLCSGRAVDTTTPIDINGNLNPLIKCDCSANNGATCLITQLHVYAINVVGVLPPELWTLTSLTYLKLDQNFLTGTLSASVGNLTELRTLSLGINALSGELPKELGSLSKLELLYFDSSGVSGGIPQSFSRLRNLRTVWASDNEFRGRIPDFIGSWTQLTTLRIGDLSNGSSSLAFISNMTSLTILVLRNNNMTGSIPSNIGEFRRLTQLFLGNNKLNGTLPTQKSASLLNIDLSYNDLSGSFPSWINQQNLQINLVANNFKIEGSSISSGLPSGLHCLQRNFPCNRDRPIYSDFGIKCGGPQFRSSSGILFEAENETLGPATYFVTESNRWAVSNTGYFTGSNNVQYMASLSQSPNTLVGELYQTQRLSASSLRYYGLGLQNGNYTVNLYFAEIVFPNFNTWQSRERRLFDIYIQGKRVLQNFDIRKEAGGSFLAVPMNFTAEVTENFLEIHLFWAGKGTCCIPNQGSYGPSVSAINATPDFEPSVSNIPPSTEENNKTGQIVGRDNRTGLIVGLVVGLGSVFFLVFGAVFLVVRRRKRRLAYEDEELLGIDARPYTFSFSELRVATSDFNSSNKLGEGGFGPVYKGTLCDGRMVAVKQLSVASHQGKSQFVAEIATISAVQHRNLVKLYGCCIEADKRLLVYEFLENKSLDQALFGKKHLIIDWAKRFEICVGVARGLTYLHEESRLRIVHRDVKASNILLDGNLIPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGRLTEKADVFGFGVMALEIVSGRPNSDPSLEEDKIYLLEWAWYLHENNRELEMVDSELSEFSREEVKRVIGVALLCTQTSPALRPSMSRVVAMLTGDVEVAAVTSKPGYLTDWKFDDITSFIDNASTEELDTSRYASTSSNVVDTKHSPAKPLLHESFGAG | 971 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 9525448 | 9536368 | - | CmoCh19G011240.1 | Cmo19g01124 | 404284 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo19g01124 | 971 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 229 | 275 | - | - | |
Cmo19g01124 | 971 | Coils | Coil | 854 | 874 | - | - | |
Cmo19g01124 | 971 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 272 | 956 | - | - | |
Cmo19g01124 | 971 | SUPERFAMILY | L domain-like | 81 | 330 | - | - | |
Cmo19g01124 | 971 | Gene3D | - | 360 | 546 | - | - | |
Cmo19g01124 | 971 | Gene3D | Ribonuclease Inhibitor | 62 | 214 | IPR032675 | - | |
Cmo19g01124 | 971 | Gene3D | Ribonuclease Inhibitor | 215 | 327 | IPR032675 | - | |
Cmo19g01124 | 971 | SUPERFAMILY | Protein kinase-like (PK-like) | 620 | 937 | IPR011009 | - | |
Cmo19g01124 | 971 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 88 | 226 | - | - | |
Cmo19g01124 | 971 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 272 | 956 | - | - | |
Cmo19g01124 | 971 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 229 | 275 | - | - | |
Cmo19g01124 | 971 | Gene3D | Phosphorylase Kinase; domain 1 | 599 | 711 | - | - | |
Cmo19g01124 | 971 | CDD | STKc_IRAK | 642 | 906 | - | - | |
Cmo19g01124 | 971 | Gene3D | Transferase(Phosphotransferase) domain 1 | 712 | 915 | - | - | |
Cmo19g01124 | 971 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 756 | 768 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo19g01124 | 971 | Pfam | Protein tyrosine and serine/threonine kinase | 639 | 903 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo19g01124 | 971 | SMART | serkin_6 | 636 | 904 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo19g01124 | 971 | ProSiteProfiles | Protein kinase domain profile. | 636 | 910 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo19g01124 | 971 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 88 | 226 | - | - | |
Cmo19g01124 | 971 | Pfam | Malectin domain | 360 | 542 | IPR021720 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo19g01124 | Cmo-Chr19:9525448 | Cmo19g01087 | Cmo-Chr19:9337712 | 0 | dispersed | |
Cmo19g01123 | Cmo-Chr19:9513633 | Cmo19g01124 | Cmo-Chr19:9525448 | 0 | tandem | |
Cmo19g01124 | Cmo-Chr19:9525448 | Cmo19g01125 | Cmo-Chr19:9537638 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75122 | PF07714 | PK_Tyr_Ser-Thr | 1.40E-45 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo19g01124 | - | - | cpep:111811393 | 1624.76 |