Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g01125 ATGGATAAGGTCATCACATTACACGCAAGTGGCCGTGGAAAGGGAGCAGATGCTGAATGGTTGGGGGAGAAATGCAAATTTTCATCCTGTTTGGGCCCAACCCAGAAGACTACTCAAGAAGACTACTCAATATCTGAAAGGGCGGACCCCAGCTTGCTTGCTTGCTGTGTTTTATCTTTGCTCTTTCTGCTTTTGCTTCCATCGTCACCCACCTGGTTGTTTTGTCTGAAGCTCAAAATCCAAATCAACCCACCACCGATCCCGATCAAGTGTGTTCGGAGGAATGAGCTATATGATGCAAGCTACACTTTACTTTCATTCAATTCAACTGAACTCTTTTGTTTGTTCGTAAATTCAGCTTATTTATACTCGTTTTTTGTGAGGATCACCAATGAGTCAACAAGAGCTCTGAATTCCATATTTAGTCAATGGAAGATATCGGCGCCATCAGGGGTGTGGAATATAAGCGGGAATCTGTGCAGTGGGAGGGCAGTCAACACTACCACGGCCATTGACAGCTATGGAAACCCCATTCCTCTCATAAAATGCGATTGCTCAGCCAACAATGGTGCAACTTGCCTCATTACTCAAATGAACGTTTATGCAATAAATGTTGTTGGTATACTCCCACCAGAGCTATGGACATTAACGTCCCTCACCTATCTGAAGTTGGATCAAAATTTCTTGACAGGAACACTATCTGCATCTGTTGGTAATCTCACAGAATTGCGGAGCTTGAGCCTGGGAACTAATGCATTATCAGGGCCACTTCCGAAGGAACTTGGATCTCTTTCTAAACTGGAAATGTTGGCTTTCGGGTCCAACAATTTCTCTGGTTCCTTACCACCAGAGCTTGGAAATCTTTCTATGTTGAAGAAACTATACATTGATAGCTCTGGAGTTACTGGTGGTATTCCTCAATCATTTTCACGCCTAAGAAACTTGAATACAGTATGGGCATCAGACAATGACCTCAGTGGCAGAATACCTGATTTCATCGGGAGTTGGACAGGGCTCACAACTTTGCAAGACAATTTTGAGGTTTCAAGGAAACTCTTTTACAGGTCCCATACCGTCGACATTTTCAAACTTGACATCTTTGACCGAGTTGAGAATAGGGTGCTGAGAAATAATAATATGACAGGTTCAATTCCATCCAACATTGGAGAATTTCGTAGTCTTACCCTGCTGGATTTGAGCTTCAACAACTTGACAGGAGAGATTCCAAGCTCGCTTTTCAATTTGAGTTCACTGTCACACTTGTTTCTTGGAAATAATAAGTTAAATGGGACCCTACCTACACAGAAGAGTGCATCACTTCTTAATATAGACTTGTCATATAATGATTTATCAGGGAGCTTTCCTTCTTGGATCAACCAGCAAAACTTACAGCTAAATTTAGTCGCCAACAATTTCATCATTGAAGGTTCAAGTATCAGTGGGTTGCCTTCTGGATTGCATTGTCTTCAACGAAGCTTTCCTTGTAATCGAGACCATTCTGATTTTGGGATCAAATGTGGAGGTCCTCAGTTCAGAAGTTCATCAGGGGTTTTGTTTGAAGCGGAAAAGGAGACTCTCGGTCCTGCTACGTACTTTGTTACCGAGTCAAATAGGTGGGCGGTTAGTAATACTGGATACTTCACTGGGTCCAACAATTCTGAATACATAGCCAATACATTGTCTCAATTCCCAAACACCCTTGTGGGAGAACTTTATCAGACACAGCGACTATCTGCTTCATCATTGAGATACTACGGACTCGGACTTCAGAATGGCAACTACTCCGTGAACCTTTATTTTGCAGAAATAGTTCTCTCAGATTCAAATACATGGCAAAGCCGTGAGAGGCGTCTCTTTGATATATATATACAGGGAAATCGTGTCGTACAGAATTTTAATATTAGAAAGGAGGCAGGTGGGTCTTTCCTTGCTGTCCCAAAGAACTTCACGGCGGAAGTTACAGAAAATTTCCTGGAAATTCATCTCTTTTGGGCGGGGAAAGGTACATGCTGCATACCAAATCAGGGTGCTTTTGGACCTTCCGTTTCAGCCATCAGTGCTACCCCAGATTTTAAACCAAATGTCAGTAACGTACCTCCAAGTACTAAGGAGAATAGTAGAACGGGCCTAATTGCAAGGGAGGATAATAGAAAGGGCCTAATTGTAGGTCTCTTTGTTGGGTTAGGATCCATTTTCGTTCTGATTATTGGCGCAGTTTTCCTTATCGTCCAAAGAAGGAATAGACGTCGTGCCAATGAAGATGAAGAGCTCCTTGGGATAGATGCTAGACCATACACTTTTAGTTTTTCTGAACTAAGGGGTGCTACAGGCGACTTTAATCCATCCAAAAAACTTGGCGAGGGAGGATTTGGACCTGTTTACAAGGGAACACTAAGTGATGGAAGAATGGTCGCTGTGAAGCAACTCTCAGTGGCATCCCACCAAGGAAAGAGCCAGTTTGTTGCTGAGATTGCTACAGTATCCGCAGTGCAGCATCGCAATCTTGTGAAATTATATGGATGTTGCATCGAGGCCGATAAACGTCTCCTTGTTTATGAGTTTCTAGAAAACAAGAGTCTTGACCAAGCATTATTTGGTAAGGAATTTATATCCAATTTTCCGGCTGTTGAAAGCAAAGATAGCAAAAAACATTTGATTATTGATTGGGCAAAACGTTTTGAGATATGCGTGGGTGTAGCAAGGGGTCTCACTTACCTTCATGAGGAGTCAAGACTTCGCATAGTGCACAGAGACGTTAAGGCCAGTAACATCCTGCTTGATGGTAATCTGATTCCCAAAATTTCAGATTTTGGCTTAGCCAAACTTTACGACGACAAAAAGACTCATATAAGCACTCGTGTTGCTGGGACAATTGGCTATCTTGCACCTGAGTATGCCATGCGTGGCCACCTTACGGAGAAGGCTGATGTGTTTGGATTTGGCGTTGTGGCTCTGGAAATTGTGAGCGGAAGGCCGAATTCATACCCGAGCTTAGAGCAGCACAAAATTTATCTTCTTGATTGGACATGGTGCCTCCACGAAAACAACCGTGAACTGGAGATGGTGGATCCTGAATTATCAGAGTTCAGCAAGGAGGAAGTAAAGAGAGTGATTGGTGTAGCTCTTCTGTGCACTCAAACATCCCCAGCTCTTCGGCCATCGATGTCCCGCGTGGTAGCAATGCTGACTGGAGACGTTGAAGTGGGCGCTGTAACTTCCAAACCAGGATACCTGATAGACTGGAAATTTGACGACATTACAAGCTTTATTGATACTCCATCAACTGAAGAACCTGATAGTAGCCTTTATGCATCAACAAGTTCGAATGTTGTTGATATAAAGCAATTGCCAGCCAAACCACTGCTCCATGAATCATTTGGGGCCGGGTAG 3390 43.22 MDKVITLHASGRGKGADAEWLGEKCKFSSCLGPTQKTTQEDYSISERADPSLLACCVLSLLFLLLLPSSPTWLFCLKLKIQINPPPIPIKCVRRNELYDASYTLLSFNSTELFCLFVNSAYLYSFFVRITNESTRALNSIFSQWKISAPSGVWNISGNLCSGRAVNTTTAIDSYGNPIPLIKCDCSANNGATCLITQMNVYAINVVGILPPELWTLTSLTYLKLDQNFLTGTLSASVGNLTELRSLSLGTNALSGPLPKELGSLSKLEMLAFGSNNFSGSLPPELGNLSMLKKLYIDSSGVTGGIPQSFSRLRNLNTVWASDNDLSGRIPDFIGSWTGLTTLQDNFEVSRKLFYRSHTVDIFKLDIFDRVENRVLRNNNMTGSIPSNIGEFRSLTLLDLSFNNLTGEIPSSLFNLSSLSHLFLGNNKLNGTLPTQKSASLLNIDLSYNDLSGSFPSWINQQNLQLNLVANNFIIEGSSISGLPSGLHCLQRSFPCNRDHSDFGIKCGGPQFRSSSGVLFEAEKETLGPATYFVTESNRWAVSNTGYFTGSNNSEYIANTLSQFPNTLVGELYQTQRLSASSLRYYGLGLQNGNYSVNLYFAEIVLSDSNTWQSRERRLFDIYIQGNRVVQNFNIRKEAGGSFLAVPKNFTAEVTENFLEIHLFWAGKGTCCIPNQGAFGPSVSAISATPDFKPNVSNVPPSTKENSRTGLIAREDNRKGLIVGLFVGLGSIFVLIIGAVFLIVQRRNRRRANEDEELLGIDARPYTFSFSELRGATGDFNPSKKLGEGGFGPVYKGTLSDGRMVAVKQLSVASHQGKSQFVAEIATVSAVQHRNLVKLYGCCIEADKRLLVYEFLENKSLDQALFGKEFISNFPAVESKDSKKHLIIDWAKRFEICVGVARGLTYLHEESRLRIVHRDVKASNILLDGNLIPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFGFGVVALEIVSGRPNSYPSLEQHKIYLLDWTWCLHENNRELEMVDPELSEFSKEEVKRVIGVALLCTQTSPALRPSMSRVVAMLTGDVEVGAVTSKPGYLIDWKFDDITSFIDTPSTEEPDSSLYASTSSNVVDIKQLPAKPLLHESFGAG 1129
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9537638 9550855 - CmoCh19G011250.1 Cmo19g01125 404285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g01125 1129 Gene3D Transferase(Phosphotransferase) domain 1 856 1070 - -
Cmo19g01125 1129 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 232 1114 - -
Cmo19g01125 1129 Pfam Protein tyrosine and serine/threonine kinase 782 1061 IPR001245 GO:0004672|GO:0006468
Cmo19g01125 1129 Gene3D Phosphorylase Kinase; domain 1 741 854 - -
Cmo19g01125 1129 ProSiteProfiles Protein kinase domain profile. 779 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo19g01125 1129 SUPERFAMILY Protein kinase-like (PK-like) 763 1097 IPR011009 -
Cmo19g01125 1129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 914 926 IPR008271 GO:0004672|GO:0006468
Cmo19g01125 1129 Gene3D - 501 689 - -
Cmo19g01125 1129 Pfam Malectin domain 502 685 IPR021720 -
Cmo19g01125 1129 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 232 1114 - -
Cmo19g01125 1129 Gene3D Ribonuclease Inhibitor 366 490 IPR032675 -
Cmo19g01125 1129 Gene3D Ribonuclease Inhibitor 152 365 IPR032675 -
Cmo19g01125 1129 CDD STKc_IRAK 785 1064 - -
Cmo19g01125 1129 SMART serkin_6 779 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo19g01125 1129 SUPERFAMILY L domain-like 170 484 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo19g01123 Cmo-Chr19:9513633 Cmo19g01125 Cmo-Chr19:9537638 0 dispersed
Cmo19g01125 Cmo-Chr19:9537638 Cmo19g01087 Cmo-Chr19:9337712 0 dispersed
Cmo19g01124 Cmo-Chr19:9525448 Cmo19g01125 Cmo-Chr19:9537638 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75123 PF07714 PK_Tyr_Ser-Thr 1.40E-45 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g01125 - - cpep:111811393 1797.71