Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g01144 ATGGTGGCTACCAAGGCTAAAGTCTGTCTGGATGCGGGTCTACCCACTGAGGATAATCGCACCCGCAGGAGTGCAATGGGAGGTTTTAAGGTTTATACGGAGAAAGATAAGATTAAAGCTGATTCCAGTTGCAAGAAGCCTGTAACAATGAAAAAGGAGCCTTCAACAGATTGTGTGAATCAACCAAAGGGAGGCCTGCAGCGCTCAGAGAAGAATACAGAGAAAATTGAAGTTTCTGGGGCCAAAATCACAAGAAGAAGAGCGTTGGCAGATGTGAGTAACGTCCGAGCCAACTCTTCTAGGAAAACAATTCAAGATGGCTCCAAGCATAAGATTTCAACTGGGACTAGAGCTAGCACTGCTGGCGTCAATGTCTCATTTAGGAAACCATTGGGAAAAACGAAGAATACAGGAGAAGCTGTGGGTGAATTGCATGCTTCAGAAAAAGGGCGTGTTAATGATTCAAATGGTTGTTCCGTCTATGAAAGAAACAAAACAGACGGTCCCTGCTGTGCCAATACTGTAAATACCAGGAGAATTAAAAAGATCTCTTTTTCGCAAACAAGGATATCTTTACCGGTGCTAAGGAGGATGAACCAAGCAAATGCTTCGAACCCAAAGGAAGTTACTGAGAAGCCTGAAAAGACCAATAGATCTCAAGCATGTTTGACTAAATCTGGCAAGAATGCAGTAGCCCAGGCAAAAAATATCAGAAGTCGGCTATGGAATAACCGAGTGAGCGATGGCTTCATCATAATGGGTCAAGCCAAGGTGGACACAAATACACTGTCCAAAAAGTCTAGTAAGCCCATTGCAAGGATCATGAAGAAGGCTTCTGGTACTCAAGAGGCATCAAAAGCCAAATATGCATCAGTTGCAATCAAATCAATTTCTAGTACTGCATCATCATCCAAGATTGTGGAACCCTCAGCATCTCTTTGTGAGGATATAACCAATATGTCCATTCAAGGGAGTGATGCATCTGAACCTACTTGTAATCCAAGTACAAGCACGGATTTGATTGTCAGGAAAAAAGTTGGTCGTAGGAGATCGTATACATCCTTGTTGGTCGCTGGAGCAAAGTTGCTGGATAAATGTGCTGTAGCTACGGAGATGGCTAACCTACCGAGTATTGACAATGACCACAACCAAATGGAGGTTGCTGAATACGTTGAGGAGATATATCGTTATTATTGGGTTACAGAGGCACAAAGCTCATCTCTTTCAAATTACTTATCAGTACAAAAAGAAATTAACCCCCATATGCGAGGCGTTTTGATCAACTGGTTGATTGAAGTACACTTCAAATTTGACTTGATGCCTGAAACAGTATTTCTCACTGTTACATTGTTTGATCGGTATCTCTCCCAAGTCATAATCAAGAAGAATGAAATGCAGTTGGTTGGTCTTACTGCATTGTTATTGGCATCGAAATATGAAGATTTTTGGCATCCTAGGGTTAAAGATCTAATTAGCATTTCAGCTGAGTCCTACTCAAGAGAGCAAGTGCTACAAATGGAAGCACTTATTCTTAAGAAGTTGAAGTTTCGCTTGAACATGCCTACTCCATATGTTTTTATGTTAAGATTTCTCAAGGCTGCTCAGTCTAATACTCAGCTTGAACACTTGTCATTTTACTTGATTGAGCTGGCCTTGGTTGAATACGAAGCTCTTAGTTTCAAGCCGTCGTTGCTATGTGCATCGGCCCTATATGTTGCACGGTGTACGTTGCAAATAAGTCCATGCTGGACCGCACTACTAAACAAACATACACGCTACGAAGCGTCCCAAATAAGAGAATGTGCTGAGAAAATCTTGAAATTTCACCAATCTGCTCATTTGGGACAGCTGAAAGTCACGTATGAGAAGTACATGAAACCTGGTTTTAGCCGTATTGCGACTCTAAAGCCATTGGACAAGCTTCCTCTTTGA 1932 41.87 MVATKAKVCLDAGLPTEDNRTRRSAMGGFKVYTEKDKIKADSSCKKPVTMKKEPSTDCVNQPKGGLQRSEKNTEKIEVSGAKITRRRALADVSNVRANSSRKTIQDGSKHKISTGTRASTAGVNVSFRKPLGKTKNTGEAVGELHASEKGRVNDSNGCSVYERNKTDGPCCANTVNTRRIKKISFSQTRISLPVLRRMNQANASNPKEVTEKPEKTNRSQACLTKSGKNAVAQAKNIRSRLWNNRVSDGFIIMGQAKVDTNTLSKKSSKPIARIMKKASGTQEASKAKYASVAIKSISSTASSSKIVEPSASLCEDITNMSIQGSDASEPTCNPSTSTDLIVRKKVGRRRSYTSLLVAGAKLLDKCAVATEMANLPSIDNDHNQMEVAEYVEEIYRYYWVTEAQSSSLSNYLSVQKEINPHMRGVLINWLIEVHFKFDLMPETVFLTVTLFDRYLSQVIIKKNEMQLVGLTALLLASKYEDFWHPRVKDLISISAESYSREQVLQMEALILKKLKFRLNMPTPYVFMLRFLKAAQSNTQLEHLSFYLIELALVEYEALSFKPSLLCASALYVARCTLQISPCWTALLNKHTRYEASQIRECAEKILKFHQSAHLGQLKVTYEKYMKPGFSRIATLKPLDKLPL 643
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9635668 9641814 - CmoCh19G011440.1 Cmo19g01144 404304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g01144 643 ProSitePatterns Cyclins signature. 423 454 IPR006671 -
Cmo19g01144 643 SMART Cyclin_C_2 521 638 IPR004367 -
Cmo19g01144 643 MobiDBLite consensus disorder prediction 100 119 - -
Cmo19g01144 643 PANTHER CYCLIN-B3-1-RELATED 162 640 - -
Cmo19g01144 643 SUPERFAMILY Cyclin-like 520 640 IPR036915 -
Cmo19g01144 643 SUPERFAMILY Cyclin-like 383 519 IPR036915 -
Cmo19g01144 643 Gene3D - 513 642 - -
Cmo19g01144 643 Gene3D - 407 512 - -
Cmo19g01144 643 SMART cyclin_7 525 607 IPR013763 -
Cmo19g01144 643 SMART cyclin_7 428 512 IPR013763 -
Cmo19g01144 643 CDD CYCLIN 521 606 IPR013763 -
Cmo19g01144 643 Pfam Cyclin, C-terminal domain 521 637 IPR004367 -
Cmo19g01144 643 PANTHER CYCLINS 162 640 IPR039361 -
Cmo19g01144 643 CDD CYCLIN 422 511 IPR013763 -
Cmo19g01144 643 Pfam Cyclin, N-terminal domain 393 519 IPR006671 -
Cmo19g01144 643 MobiDBLite consensus disorder prediction 43 70 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01149 Cmo-Chr7:6170474 Cmo19g01144 Cmo-Chr19:9635668 3.66E-73 dispersed
Cmo07g01150 Cmo-Chr7:6175157 Cmo19g01144 Cmo-Chr19:9635668 6.24E-73 dispersed
Cmo19g01144 Cmo-Chr19:9635668 Cmo15g00668 Cmo-Chr15:3266992 2.11E-53 dispersed
Cmo19g01144 Cmo-Chr19:9635668 Cmo02g01333 Cmo-Chr2:7911851 1.80E-75 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g01144 K21777 - csv:101213908 1017.68