Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo19g01145 ATGTTCAAATTCTCTCTTCTTTTTGTTTCCCTCTGTCTCCCTGCTCTTGTCTCCGGCGGGCGGGAGTCATGCACGTGTGACTCCGATGCCGCCGCCGAGCACAACGCCGCACAGGAAGCGATCAAGTACAAGCTGGGGTCGATTGCTTCGGTGTTGGCGGCCGGAGCTGCAGGGGTGAGCCTTCCTTTGGTGGGCAAGAGGATTCCGTCTCTGAGGCCTGAAAAGGACATTTTTTTCATGATCAAGGCCTTTGCTGCAGGGGTCATTTTAGGCACTGGGTTCGTCCACATACTCCCCGACGCCTTCCAAGACTTAACCTCCCCATGCATCGGACAAAATCCTTGGGCCCACTTCCCTGTCGCCGGGTTCATTGCAATGGCCTCCTCCATCGGCACCTTGATGGTCGACACATTTGCAACCACCTTTTACCACAGACGCCACTTCAGTAAACCCAAGCAGTTACTTGCAGACCAGGAAACAGCCGAGGAGCATGCCGGTCACGTGCATGTTCACACCCACGCCACACATGGCCACGCTCACGGCTCCGCCGCCGCCGCCGTACCCGCAGAAGATTTGAGTCTCACAGAGTTAATCCGGTACCGGATTATATCTCAGGTGTTGGAATTGGGAATTGTGATTCATTCAGTAATAATTGGTATATCTCTTGGTACCTCCCAGAGCCCTGCTACCATTAAGCCGCTGCTGGTAGCTCTGTCTTTCCACCAGTTTTTTGAGGGCATGGGCCTCGGTGGCTGCATATCCCAGGCACAATTTAGGTGGCGATCAGCGGCAGCAATGGCGACATTTTTCTCAGTGACAGCGCCGGTGGGAATTGCAGTGGGAATCGGTATCACGGGAGTTTACAGAGACGACAGCCGGAGGGGTCTGATCGTGGAGGGAAGCATGAACTCGGCATCGGCGGGGATATTGATATACATGGCGCTCGTGGACCTTCTTGCTGCAGATTTCATGAACCCGAGGCTGCAAAACAATTTGGGGCTTCAGTTAGGAGCTAATATCTCTTTGCTTCTCGGGGCTGCTTGCATGTCTGTATTGGCCAAATGGGCTTGA 1071 54.06 MFKFSLLFVSLCLPALVSGGRESCTCDSDAAAEHNAAQEAIKYKLGSIASVLAAGAAGVSLPLVGKRIPSLRPEKDIFFMIKAFAAGVILGTGFVHILPDAFQDLTSPCIGQNPWAHFPVAGFIAMASSIGTLMVDTFATTFYHRRHFSKPKQLLADQETAEEHAGHVHVHTHATHGHAHGSAAAAVPAEDLSLTELIRYRIISQVLELGIVIHSVIIGISLGTSQSPATIKPLLVALSFHQFFEGMGLGGCISQAQFRWRSAAAMATFFSVTAPVGIAVGIGITGVYRDDSRRGLIVEGSMNSASAGILIYMALVDLLAADFMNPRLQNNLGLQLGANISLLLGAACMSVLAKWA 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 9642448 9644431 + CmoCh19G011450.1 Cmo19g01145 404305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo19g01145 356 Pfam ZIP Zinc transporter 43 353 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cmo19g01145 356 PANTHER ZINC/IRON TRANSPORTER 11 356 - -
Cmo19g01145 356 PANTHER METAL TRANSPORT PROTEIN 11 356 - -
Cmo19g01145 356 TIGRFAM zip: ZIP zinc/iron transport family 26 356 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00470 Cmo-Chr13:5758732 Cmo19g01145 Cmo-Chr19:9642448 2.19E-101 dispersed
Cmo18g00524 Cmo-Chr18:3822705 Cmo19g01145 Cmo-Chr19:9642448 1.10E-107 dispersed
Cmo19g01145 Cmo-Chr19:9642448 Cmo12g00579 Cmo-Chr12:3584802 3.97E-93 dispersed
Cmo11g02069 Cmo-Chr11:13998282 Cmo19g01145 Cmo-Chr19:9642448 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo19g01145 K14709 - csv:101216720 479.944