Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo20g00049 | ATGGCATCTTTTAAAGCTTCCATGCCTTTGTTATTTGTTGTGTGTTTGATGGTTGGGTCTGTGAGCGCACAACTGAGCTCCACATTCTACGATACCACATGTCCCAATGTATCAAGCATTGTGCGTGGTGTTGTGGAGCAAGCACTCCGAAGTGACGACAGGGCTGGTGCCAAACTCATCCGTCTCCACTTCCACGACTGCTTCGTCGATGGATGTGATGCGTCGGTGCTATTAGAGGATCAAGATGGCATAGTGAGCGAGCTGGGTGCAAACGGAAACGCTGGCATCACAGGTTTCAATATTGTTAATGACATCAAAGCTGCAATCGAGAATGTTTGTCCGGGTGTCGTCTCTTGTGCTGATATACTAGCCCTTGCTTCTCGACACTCCGTCAACTTGGCAGGAGGCCCGGGTTGGGAGGTTCAATTAGGAAGAAGAGATGGAAGAACAGCAAATTTGGATGGTGCCATGGAGCTTCCAAGTCCTTTTGACGATCTCTCAGTCCTTAGAAGAAAGTTCAGGGACGTTCAACTTGACGATACTACCGATCTCGTTGCTCTATCAGGTGCACACACATTTGGGCGATCGAGATGCCGATTTTTCGACAGACGGCTAAACACTTCAAACCCGGACCCGACCCTGAACTCAACATACGCGGACGAGCTGCGTCAAAACTGTCAACCAGGGCGAGACACATTCGTGAATCTGGACCCAACCACACCGGACACCTTCGACAGCAACTACTTCACAAATCTTCAGAGCAATCGCGGGCTTCTGGAAAGTGATCAAGTTCTGTTCTCCACCAGCGGAGCTCCAACTATCAGTATTGTCAACAGCTTCGCCAGCAGCCAGAGCCAATTCTTCACCGCCTTCGCTCAGTCAATGATTAACATGGGAAATCTCGGGCCTTTGACTGGGAGCACAGGAGAAATCAGGACCAATTGCAGAAGACTCAACTAA | 960 | 49.58 | MASFKASMPLLFVVCLMVGSVSAQLSSTFYDTTCPNVSSIVRGVVEQALRSDDRAGAKLIRLHFHDCFVDGCDASVLLEDQDGIVSELGANGNAGITGFNIVNDIKAAIENVCPGVVSCADILALASRHSVNLAGGPGWEVQLGRRDGRTANLDGAMELPSPFDDLSVLRRKFRDVQLDDTTDLVALSGAHTFGRSRCRFFDRRLNTSNPDPTLNSTYADELRQNCQPGRDTFVNLDPTTPDTFDSNYFTNLQSNRGLLESDQVLFSTSGAPTISIVNSFASSQSQFFTAFAQSMINMGNLGPLTGSTGEIRTNCRRLN | 319 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 291502 | 293248 | - | CmoCh20G000490.1 | Cmo20g00049 | 404366 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo20g00049 | 319 | SUPERFAMILY | Heme-dependent peroxidases | 24 | 319 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | PANTHER | PEROXIDASE 58 | 13 | 319 | - | - | |
Cmo20g00049 | 319 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 319 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 183 | 193 | IPR019793 | - | |
Cmo20g00049 | 319 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | PRINTS | Plant peroxidase signature | 97 | 110 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | PRINTS | Plant peroxidase signature | 116 | 126 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | PRINTS | Plant peroxidase signature | 135 | 150 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | PRINTS | Plant peroxidase signature | 182 | 194 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | PRINTS | Plant peroxidase signature | 235 | 250 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | PRINTS | Plant peroxidase signature | 251 | 268 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | PRINTS | Plant peroxidase signature | 293 | 306 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | ProSitePatterns | Peroxidases active site signature. | 56 | 67 | IPR019794 | GO:0004601 | |
Cmo20g00049 | 319 | Gene3D | Peroxidase, domain 2 | 160 | 298 | - | - | |
Cmo20g00049 | 319 | Pfam | Peroxidase | 41 | 283 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | PRINTS | Haem peroxidase superfamily signature | 117 | 134 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | PRINTS | Haem peroxidase superfamily signature | 135 | 147 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | PRINTS | Haem peroxidase superfamily signature | 183 | 198 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | PRINTS | Haem peroxidase superfamily signature | 237 | 252 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | PANTHER | PEROXIDASE 72-RELATED | 13 | 319 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00049 | 319 | CDD | secretory_peroxidase | 24 | 317 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo20g00049 | 319 | Gene3D | - | 29 | 319 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo20g00049 | Cmo-Chr20:291502 | Cmo20g00052 | Cmo-Chr20:299374 | 8.71E-139 | dispersed | |
Cmo20g00049 | Cmo-Chr20:291502 | Cmo20g00050 | Cmo-Chr20:294690 | 1.59E-161 | tandem | |
Cmo15g01429 | Cmo-Chr15:9709780 | Cmo20g00049 | Cmo-Chr20:291502 | 8.58E-74 | transposed | |
Cmo15g01428 | Cmo-Chr15:9709194 | Cmo20g00049 | Cmo-Chr20:291502 | 8.69E-47 | transposed | |
Cmo02g01248 | Cmo-Chr2:7489384 | Cmo20g00049 | Cmo-Chr20:291502 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo20g00049 | K00430 | - | csv:101212957 | 448.743 |