Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo20g00050 | ATGGTTTCCTTCAAAGTTGCTTTCCTTTTGTTTGTGGGGTTCATGGTCGGAGCTTCTAAAGCTCAGCTGTGCCCGACGTTCTATGACGACTCATGCCCCGACGTATCAGACATTGTGCGCGGTGTAGTGCAGCAGGCTTTGGAGACCGACGACCGAGCGGGTGCCAGACTCATTCGCCTTCACTTCCATGACTGTTTCGTTGATGGGTGTGATGGATCAGTTTTACTAGTGAACCAAACGGGAGTAGTGAGTGAGCTTGGCGCTCCTGGAAATGCAAATATTACAGGATTTAACATTGTTGATGACATCAAAGCTGCCCTCGAGGAGGCTTGTCCGGGTGTTGTTTCTTGTGCCGACATCTTAGCCTTAGCTTCCGTACATGCGGTTTCTTTGGTGGGAGGTCCCTTTTGGGAGGTTCAACTGGGAAGAAGAGACAGGCGAAGGGCCAACTTACAAGGCGCAATCAACGGGCTTCCAAGTCCCTTCGAAAATGTTCAAGAACTTAAAGAAAAGTTCGGCAGAGTGGGTCTTGATTCTACTGATCTTGTTGCTCTATCTGGGGCCCACACATTCGGGCGTTCGAGATGCCGATTCTTCGACAGACGTTTGAACGTTTCGAGCCCAGACAACACCCTGGACGCCTCATATGCAACCCAGCTCCGTCAAGCTTGCGCTAGCAGCAGAGACACGTTCTTGAACCTCGACCCCACCACTCCCGACGACTTCGACAACAACTACTACACCAACCTTCAGTCCAACTTCGGCCTTCTCGGCAGCGACCAGGTCCTGTTCTCCACTCCCGGCGAGGACACCGTGGACATCGTCAACATGTTCGCCGGCAGCGAGCAGCAGTTCTTCGACAGCTTCGGGCAGTCCATGATCAACATGGGAAATATCAGCCCTTTAACTGGTGACCAGGGAGAAGTTAGGTGCAACTGCAGAAGACTCAACTGA | 954 | 52.1 | MVSFKVAFLLFVGFMVGASKAQLCPTFYDDSCPDVSDIVRGVVQQALETDDRAGARLIRLHFHDCFVDGCDGSVLLVNQTGVVSELGAPGNANITGFNIVDDIKAALEEACPGVVSCADILALASVHAVSLVGGPFWEVQLGRRDRRRANLQGAINGLPSPFENVQELKEKFGRVGLDSTDLVALSGAHTFGRSRCRFFDRRLNVSSPDNTLDASYATQLRQACASSRDTFLNLDPTTPDDFDNNYYTNLQSNFGLLGSDQVLFSTPGEDTVDIVNMFAGSEQQFFDSFGQSMINMGNISPLTGDQGEVRCNCRRLN | 317 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 294690 | 297006 | - | CmoCh20G000500.1 | Cmo20g00050 | 404367 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo20g00050 | 317 | SUPERFAMILY | Heme-dependent peroxidases | 22 | 317 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | Pfam | Peroxidase | 39 | 280 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | Gene3D | Peroxidase, domain 2 | 159 | 296 | - | - | |
Cmo20g00050 | 317 | PRINTS | Haem peroxidase superfamily signature | 54 | 68 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | PRINTS | Haem peroxidase superfamily signature | 115 | 132 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | PRINTS | Haem peroxidase superfamily signature | 133 | 145 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | PRINTS | Haem peroxidase superfamily signature | 181 | 196 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | PRINTS | Haem peroxidase superfamily signature | 235 | 250 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | CDD | secretory_peroxidase | 22 | 315 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo20g00050 | 317 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 181 | 191 | IPR019793 | - | |
Cmo20g00050 | 317 | PANTHER | PEROXIDASE 72-RELATED | 10 | 317 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | PRINTS | Plant peroxidase signature | 32 | 51 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | PRINTS | Plant peroxidase signature | 56 | 76 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | PRINTS | Plant peroxidase signature | 95 | 108 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | PRINTS | Plant peroxidase signature | 114 | 124 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | PRINTS | Plant peroxidase signature | 133 | 148 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | PRINTS | Plant peroxidase signature | 180 | 192 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | PRINTS | Plant peroxidase signature | 233 | 248 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | PRINTS | Plant peroxidase signature | 249 | 266 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | PRINTS | Plant peroxidase signature | 291 | 304 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | ProSitePatterns | Peroxidases active site signature. | 54 | 65 | IPR019794 | GO:0004601 | |
Cmo20g00050 | 317 | ProSiteProfiles | Plant heme peroxidase family profile. | 22 | 317 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00050 | 317 | PANTHER | PEROXIDASE 58 | 10 | 317 | - | - | |
Cmo20g00050 | 317 | Gene3D | - | 27 | 317 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g01251 | Cmo20g00050 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g01248 | Cmo-Chr2:7489384 | Cmo20g00050 | Cmo-Chr20:294690 | 3.62E-162 | dispersed | |
Cmo02g01249 | Cmo-Chr2:7491337 | Cmo20g00050 | Cmo-Chr20:294690 | 9.61E-78 | dispersed | |
Cmo20g00050 | Cmo-Chr20:294690 | Cmo20g00052 | Cmo-Chr20:299374 | 3.87E-134 | dispersed | |
Cmo20g00049 | Cmo-Chr20:291502 | Cmo20g00050 | Cmo-Chr20:294690 | 1.59E-161 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo20g00050 | K00430 | - | csv:101212717 | 518.464 |