Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo20g00055 | ATGGCTTCCCCTAAACTCGCACCCTTCCTTGTTGTGGCGGCTCTGATGCTACGAGCTTCTCACGCCCACCTTAGCCCTTTCTTCCACGCCAAAACATGCCCTCAGCTGCCTTTCCTTGTTCTCAACGTGGTTGCCCAAGCTCTACAAACTGACGACCGAGCAGCTGCCAAGCTCATTCGCCTCCATTTTCATGATTGCTTCGTCAATGGGTGTGATGGGTCTGTGCTATTGGAGGACGTGCCGGGCGTCATCGATAGCGAATTAAACGGACCACCAAACGGTGGGATCCAAGGGCTGGACATCGTGGACAACATTAAATCAGCGGTTGAAAGCGCTTGCCCAGGCGTTGTTTCCTGCGCCGACATCTTAGCCATTTCCTCACAAATCTCTGTTTTCTTGTCGGGAGGGCCAATTTGGGAAGTTCCACTGGGAAGAAAAGACAGCAGGATAGCCAATAGAACCGGAACCTCAAACCTTCCTGGTCCCTCCGAAACCCTAGTCGGGCTTAAACGCAAGTTTGCGGCACAGGGGCTTGATTCTACGGATCTTGTGGCTCTATCAGGAGCACACACGTTCGGGCGAGCGAGATGTTTTTTCTTCACTGGCCGCTTCGACAACTTCAACAACACCGGAAGACCCGACCCAACGCTAAACCCTGTTTACAGGGAGCAGCTTCGACGGCTCTGTACGACCCAACAAACACGAGTCAATTTCGACCCCATAACGCCAACCAAATTCGACAAAGCCTACTATACCAATCTCATAAACCTGAAGGGGCTTCTCCAAAGTGACCAAGACCTGTTCTCCACCCCCAGGGCTGATACCACGGCCATCGTAAAAGATTTCGCCGCTAACGAGCTTGCCTTCTTTACCCAATTTGTGAAATCCATGATCAAAATGGGGAATCTGAAGCCGCCCCCCGGCATCAGATCAGAAATCAGACAAAACTGTAGGAGGGTCAACCCGGTGAAGGCCTATGACATTATGTAA | 990 | 51.72 | MASPKLAPFLVVAALMLRASHAHLSPFFHAKTCPQLPFLVLNVVAQALQTDDRAAAKLIRLHFHDCFVNGCDGSVLLEDVPGVIDSELNGPPNGGIQGLDIVDNIKSAVESACPGVVSCADILAISSQISVFLSGGPIWEVPLGRKDSRIANRTGTSNLPGPSETLVGLKRKFAAQGLDSTDLVALSGAHTFGRARCFFFTGRFDNFNNTGRPDPTLNPVYREQLRRLCTTQQTRVNFDPITPTKFDKAYYTNLINLKGLLQSDQDLFSTPRADTTAIVKDFAANELAFFTQFVKSMIKMGNLKPPPGIRSEIRQNCRRVNPVKAYDIM | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 306631 | 308033 | - | CmoCh20G000550.1 | Cmo20g00055 | 404372 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo20g00055 | 329 | PRINTS | Plant peroxidase signature | 33 | 52 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | PRINTS | Plant peroxidase signature | 57 | 77 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | PRINTS | Plant peroxidase signature | 97 | 110 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | PRINTS | Plant peroxidase signature | 116 | 126 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | PRINTS | Plant peroxidase signature | 135 | 150 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | PRINTS | Plant peroxidase signature | 181 | 193 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | PRINTS | Plant peroxidase signature | 237 | 252 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | PRINTS | Plant peroxidase signature | 253 | 270 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | PRINTS | Plant peroxidase signature | 295 | 308 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | Gene3D | Peroxidase, domain 2 | 160 | 300 | - | - | |
Cmo20g00055 | 329 | PRINTS | Haem peroxidase superfamily signature | 55 | 69 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | PRINTS | Haem peroxidase superfamily signature | 117 | 134 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | PRINTS | Haem peroxidase superfamily signature | 135 | 147 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | PRINTS | Haem peroxidase superfamily signature | 182 | 197 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | PRINTS | Haem peroxidase superfamily signature | 239 | 254 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | ProSiteProfiles | Plant heme peroxidase family profile. | 23 | 321 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | ProSitePatterns | Peroxidases active site signature. | 55 | 66 | IPR019794 | GO:0004601 | |
Cmo20g00055 | 329 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 182 | 192 | IPR019793 | - | |
Cmo20g00055 | 329 | PANTHER | PEROXIDASE 72-RELATED | 15 | 321 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | Gene3D | - | 28 | 321 | - | - | |
Cmo20g00055 | 329 | PANTHER | PEROXIDASE 58 | 15 | 321 | - | - | |
Cmo20g00055 | 329 | CDD | secretory_peroxidase | 23 | 320 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo20g00055 | 329 | Pfam | Peroxidase | 42 | 285 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo20g00055 | 329 | SUPERFAMILY | Heme-dependent peroxidases | 24 | 322 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g01250 | Cmo-Chr2:7498257 | Cmo20g00055 | Cmo-Chr20:306631 | 0 | dispersed | |
Cmo02g01251 | Cmo-Chr2:7499807 | Cmo20g00055 | Cmo-Chr20:306631 | 3.82E-173 | dispersed | |
Cmo20g00052 | Cmo-Chr20:299374 | Cmo20g00055 | Cmo-Chr20:306631 | 2.84E-140 | dispersed | |
Cmo20g00055 | Cmo-Chr20:306631 | Cmo02g01253 | Cmo-Chr2:7506324 | 1.38E-96 | dispersed | |
Cmo20g00054 | Cmo-Chr20:303963 | Cmo20g00055 | Cmo-Chr20:306631 | 3.70E-73 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo20g00055 | K00430 | - | csv:101211989 | 570.852 |