Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00061 ATGGATCCTTTGAAAAAGAGGGAAAAAATTGAGAGCATAGTGTACGCGCGATCTACTTCGCGGCTGTCGACATTTTCGAAGCCCCAACCCTTTCCATCTTTGTTATCATCGAAACCCCTCCTTACTGTTCCCGTGGTTAAATTGGGCAGATCTCGATTCTCTTCTGCGAGATACTATTTCCTGAAGATGGCGGCAGCAGCTTCTAACCTTCAGATAGCAACACTAAGACACTGCCAATTGCAGTCTAGGAAAGGCTTGAAGCCATGTGGAACAACTGTTAGCAGCAGGTCTAAAGCATCATCATGGGCTAAGCTTTCGAGTTCTAGCAACATATCATCATCGCCATTTTTCTACCGGAAGTTTGTCTCGTCTTCTGGTAAAAATGAGAAAACTGTAACCAAAGCAATGGCTGAAGCTAGTGATAGTAAGCCTGTCTCTGGGCTGTCAATTGATCTACGAGGCAAGAGAGCATTTATCGCTGGTGTAGCTGATGATAATGGATATGGGTGGGCAATTGCAAAATCTCTTGCTGCGGCTGGTGCTGAAATTCTTGTCGGCACATGGGTGCCTGCCTTGAACATTTTTGAATCCAGCTTCAGACGTGGAAAGTTCGATGAATCACGAGTACTGCCTGATGGTTCTCTTATGGAGATCGCAAAAGTATACCCTCTCGATGCAGTTTTCGATAGCCCTGAAGATGTTCCTGAAGATATAAAAACAAATAAACGCTATGCCGGATCCTCAAATTGGACTGTAAAGAAAGTGTCTTTTGTTTTATATGCACGAGCATGTCTCAAGAATCAACTGTGCCAAAATTTGATGAAGTCTTGGAGTCATTTTTCATTGAATCTATCTGATGAAGTTGCTGAGTCTGTGAAGCAAGACTTTGGCAGCATTGACATTCTTGTGCACTCCCTTGCTAATGGACCGGAGGTAACAAAACCTCTGTTGGAGACATCTCGGAATGGTTATCTAGCAGCTTTATCCGCATCAAGCTACTCTTATATATCTCTACTGAAGCATTTTGTTCCGATTATTAATCCAGGCAGGTTCAAATATTTCCATCAAAGGCTTTCGATTTTACCTTGTGGTTCTTCATTATCCCTCACGTACATAGCATCTGAAAGGATCATTCCAGGGTATGGAGGTGGCATGAGTTCTGCCAAAGCTGCTTTGGAGAGTGATACAAGAGTACTTGCTTTTGAAGCTGGAAGAAAGCACAAAATCAGAGTGAACACGATATCTGCTGCATATCTGCTGACGGCAGATTATTTTGTCTCGAGTCATATTGGCCCACTAAGAAGTCGAGCTGCAAAAGCAATTGGGTTTATTGACATGATGATTGACTACTCATCAGCCAATGCACCTTTGCAGAAAGAATTATCTGCTGAGGAGGTGGGGAACGCAGCTGCCTTCTTGGCATCACCTCTGGCTTCTGCCATTACCGGAGCTGTTATTTATGTTGATAATGGTTTGAATGCGATGGGCGTGGGAGTCGATAGCCCAATGCCTCTGGGAGAGGACTTCCATTTCGCAGATGCTGGCAAATCTCATATATCAGTGAACGGCCATGATCGATTGAAGCACTCTGGGAGACTGATGAGTGGGGTGGAGTCTGATCCATCTGAAAGTATTCTCAATGCTGCTCCGCGGGCGTCGACCCTGGCGTCATCATCGGCACTCAAGCTGTTGCTATGTCTGATGAACACAGGGTAA 1716 44.7 MDPLKKREKIESIVYARSTSRLSTFSKPQPFPSLLSSKPLLTVPVVKLGRSRFSSARYYFLKMAAAASNLQIATLRHCQLQSRKGLKPCGTTVSSRSKASSWAKLSSSSNISSSPFFYRKFVSSSGKNEKTVTKAMAEASDSKPVSGLSIDLRGKRAFIAGVADDNGYGWAIAKSLAAAGAEILVGTWVPALNIFESSFRRGKFDESRVLPDGSLMEIAKVYPLDAVFDSPEDVPEDIKTNKRYAGSSNWTVKKVSFVLYARACLKNQLCQNLMKSWSHFSLNLSDEVAESVKQDFGSIDILVHSLANGPEVTKPLLETSRNGYLAALSASSYSYISLLKHFVPIINPGRFKYFHQRLSILPCGSSLSLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKHKIRVNTISAAYLLTADYFVSSHIGPLRSRAAKAIGFIDMMIDYSSANAPLQKELSAEEVGNAAAFLASPLASAITGAVIYVDNGLNAMGVGVDSPMPLGEDFHFADAGKSHISVNGHDRLKHSGRLMSGVESDPSESILNAAPRASTLASSSALKLLLCLMNTG 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 338649 346058 + CmoCh20G000610.1 Cmo20g00061 404378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00061 571 PANTHER ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 286 503 IPR014358 GO:0004318|GO:0006633
Cmo20g00061 571 Gene3D - 277 423 - -
Cmo20g00061 571 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 286 496 IPR036291 -
Cmo20g00061 571 Gene3D Enoyl acyl carrier protein reductase 441 500 - -
Cmo20g00061 571 Gene3D - 149 258 - -
Cmo20g00061 571 PANTHER ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 63 256 IPR014358 GO:0004318|GO:0006633
Cmo20g00061 571 Pfam Enoyl-(Acyl carrier protein) reductase 286 493 - -
Cmo20g00061 571 PRINTS Glucose/ribitol dehydrogenase family signature 297 308 IPR002347 -
Cmo20g00061 571 PRINTS Glucose/ribitol dehydrogenase family signature 407 424 IPR002347 -
Cmo20g00061 571 PRINTS Glucose/ribitol dehydrogenase family signature 385 404 IPR002347 -
Cmo20g00061 571 PRINTS Glucose/ribitol dehydrogenase family signature 456 476 IPR002347 -
Cmo20g00061 571 PANTHER ENOYL-ACYL-CARRIER REDUCTASE 286 503 - -
Cmo20g00061 571 CDD ENR_SDR 154 496 IPR014358 GO:0004318|GO:0006633
Cmo20g00061 571 PANTHER ENOYL-ACYL-CARRIER REDUCTASE 63 256 - -
Cmo20g00061 571 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 150 187 IPR036291 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g00834 Cmo20g00061 CCT
Cmo11g00834 Cmo20g00061 ECH
Cmo02g01256 Cmo20g00061 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo20g00061 Cmo-Chr20:338649 Cmo04g01235 Cmo-Chr4:6278066 7.58E-07 dispersed
Cmo11g00834 Cmo-Chr11:4237476 Cmo20g00061 Cmo-Chr20:338649 8.04E-160 wgd
Cmo02g01256 Cmo-Chr2:7518436 Cmo20g00061 Cmo-Chr20:338649 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00061 K00208 - csv:101210519 629.402