Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00085 ATGGCCTCTCTGGCGCTGACTTCCTCGTATCTCCCTTCTCTCCGGTCGCGCCTTCCGAAATCTGATTCAAATGCTCAAATTCGCTGCTCCTCTCTCCGTTCCAGTCTTCCCAAAGCCGCCATTTTCGGTAATGGCATCAGAACTAGCTTCCGCATTCCGTCTTCTCTGTCAAGTGAAGCTAAATCCGTTAAACCAGCTCTAAATATCGGAAGCTCTCGTGGAAATCTCAGTGCTTTTACTGTCCGAGCGGCTTCTTCTTCTCCTTCTGCTGCTGTAGCTCCGGCTTCTCAGCCATGGCAAGGTGCGGCGATTAAGCCACTTATTGCTTCGATTGCTACGGGTATCATTTTGTGGTTTGTTCCGGTTCCGTCTGGTGTTTCTCGAAACGCGTGGCAATTGCTCGCGATTTTCCTCGCTACCATTGTTGGGATTATAACTCAGCCATTGCCTCTTGGTGCTGTTGCTTTGCTGGGACTAGGCGCCTCTGTTCTGACTAAAACCCTAACTTTCTCTGCTGCCTTCTCTGCGTTCGGTGATCCCATCCCATGGCTCATCGCTCTTGCCTTCTTCTTTGCTCGAGGTTTCATTAAGACCGGACTTGGTAATCGAATTGCTTATCAATTTGTTTCTCTATTCGGTAGTTCGTCGTTAGGGTTAGGGTACAGTTTAGTATTCAGTGAGGCCCTGTTGGCGCCGGCAATTCCCTCGGTGTCGGCCAGAGCAGGAGGGATATTCCTTCCACTGGTGAAATCGCTCTGTGTTGCTTGCGGTAGCAATGTTGGTAATGGTACGGAGAACCGGTTGGGATCGTGGTTGATGCTCACTTGCTTTCAAACTTCGGTGATTTCATCATCCATGTTCTTGACGGCTATGGCTGCTAATCCTCTGAGTGCCACTCTGACGTATAACACGATTAAGCAGACGATTGGATGGACCGACTGGGCTAAAGCAGCGATTGTTCCAGGATTGATCTCCTTGATTGTGGTGCCATTGCTTTTGTATGTGATTTATCCGCCCACGGTGAAAAGCAGTCCAGATGCACCAAAGCTTGCCAGAGAGAAGTTGGACAAGATGGGACCAATGACCAAGAATGAGATCATAATGGCTGGAACTCTGCTTCTAACGGTGGGTCTTTGGGTTTTTGGAGGGGTTCTTAATGTGGACGCTGTTACTGCTGCCATCTTGGGATTGTCCGTCCTTCTTGTTACAGGCGTTGTGACATGGAAAGAGTGCTTGGGAGAAGCTGTTGCCTGGGACACTCTTACATGGTTTGCTGCACTCATTGCAATGGCAGGGTATCTCAACAAATATGGTCTCATCTCCTGGTTCAGCCAAACTGTAGTGAAGTTTGTTGGTGGACTAGGCCTTTCATGGCAGCTGTCGTTCGGCATTTTAGTTCTTCTCTATTTCTACTCCCACTACTTCTTTGCAAGTGGAGCTGCTCACATAGGCGCGATGTTTACCGCCTTCTTATCTGTTGCTAGTGCTTTGGGGACTCCCCCCTACTTTGGAGCAATAGTACTTTCCTTCTTATCTAATCTGATGGGTGGCCTAACCCACTACGGCATTGGCTCAGCGCCTGTCTTCTATGGTGCCAACTATGTTCCTCTTGCTCAATGGTGGGGCTACGGGTTCCTCGTATCTATTGTCAACATCATTATCTGGCTTGGCATTGGAGGAATGTGGTGGAAGGCCATCGGTTTATGGTGA 1710 49.06 MASLALTSSYLPSLRSRLPKSDSNAQIRCSSLRSSLPKAAIFGNGIRTSFRIPSSLSSEAKSVKPALNIGSSRGNLSAFTVRAASSSPSAAVAPASQPWQGAAIKPLIASIATGIILWFVPVPSGVSRNAWQLLAIFLATIVGIITQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGNGTENRLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTYNTIKQTIGWTDWAKAAIVPGLISLIVVPLLLYVIYPPTVKSSPDAPKLAREKLDKMGPMTKNEIIMAGTLLLTVGLWVFGGVLNVDAVTAAILGLSVLLVTGVVTWKECLGEAVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPYFGAIVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAQWWGYGFLVSIVNIIIWLGIGGMWWKAIGLW 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 442145 445887 + CmoCh20G000850.1 Cmo20g00085 404402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00085 569 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 76 569 - -
Cmo20g00085 569 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 121 563 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cmo20g00085 569 CDD ArsB_NhaD_permease 141 563 - -
Cmo20g00085 569 Pfam Sodium:sulfate symporter transmembrane region 106 569 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cmo20g00085 569 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 76 569 IPR030676 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g01287 Cmo20g00085 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00431 Cmo-Chr4:2140957 Cmo20g00085 Cmo-Chr20:442145 8.32E-151 dispersed
Cmo16g00263 Cmo-Chr16:1165773 Cmo20g00085 Cmo-Chr20:442145 3.38E-157 dispersed
Cmo02g01287 Cmo-Chr2:7670439 Cmo20g00085 Cmo-Chr20:442145 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00085 - - bhj:120088316 1004.2