Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00135 ATGGAACAGAGGAAGTACAGAGCCGATCTTCTTTCACCGGCCTTCCTTGTCCTCCTCCTTTTCCTCTCCCTTTCCGGTCGATCGGCTGTTCACGCCTACAAGAACTACACCGTCGGAGACTCCCTAGGCTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTATCAAAAATGGACGGTCGGCAAGAACTTCAGCCTCGGCGATTTTCTAATTTTTAACACCGACAACAATCACTCGGTTGTGCTTACGTATAATTTCACCACATACAAGCTATGCGACTACGACGACGCATCGGAACATGACACGACAGAATGGTCCGCTGCTGACCCGTCGGCGACCACTCCATACGCCGTGACGGTGGCCGTCCCACTGCTAAAAGAAGGGACCAACTATTTCTTCTCCGGCCACTACGACGGAGAGCAATGTCAAAATGGGCAACAATTCAAAATAAACGTCACTCACGGACAGGGCCTCCCGAAGAGCATGAGAGATTCTTCCGACGAAGCTCCTGCTCCTGTAGTTCCCGACACCGGCGACCAAACTGAATCTGCTCCCGACACCATTGTCCCTTCCAACTTCGACAATCCCGTAAACGACGTAGCTGATAGCGACAAGGAGGTTTCGGGCTCCGTTTCGCTATCGCTTCACTCGAAGTTTAATGAGTTTTTCTTCGTGTTAGCTGGTATTGCCTCTGCCTGCATTTTTCTCTGTACTGAATGA 720 50.83 MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTVAVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 690083 692791 - CmoCh20G001350.1 Cmo20g00135 404452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00135 239 ProSiteProfiles Phytocyanin domain profile. 34 154 IPR003245 GO:0009055
Cmo20g00135 239 CDD Phytocyanin 34 152 - -
Cmo20g00135 239 PANTHER BLUE COPPER PROTEIN 12 220 IPR039391 GO:0009055
Cmo20g00135 239 Gene3D - 33 157 IPR008972 -
Cmo20g00135 239 MobiDBLite consensus disorder prediction 180 194 - -
Cmo20g00135 239 Pfam Plastocyanin-like domain 44 146 IPR003245 GO:0009055
Cmo20g00135 239 SUPERFAMILY Cupredoxins 34 152 IPR008972 -
Cmo20g00135 239 MobiDBLite consensus disorder prediction 157 194 - -
Cmo20g00135 239 PANTHER BNAA08G26900D PROTEIN 12 220 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00916 Cmo-Chr8:5975372 Cmo20g00135 Cmo-Chr20:690083 1.42E-34 dispersed
Cmo17g00026 Cmo-Chr17:124963 Cmo20g00135 Cmo-Chr20:690083 9.58E-38 dispersed
Cmo20g00135 Cmo-Chr20:690083 Cmo05g00540 Cmo-Chr5:2612412 3.96E-14 dispersed
Cmo20g00135 Cmo-Chr20:690083 Cmo02g01329 Cmo-Chr2:7897001 9.57E-145 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00135 - - cpep:111776932 465.692