Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo20g00135 | ATGGAACAGAGGAAGTACAGAGCCGATCTTCTTTCACCGGCCTTCCTTGTCCTCCTCCTTTTCCTCTCCCTTTCCGGTCGATCGGCTGTTCACGCCTACAAGAACTACACCGTCGGAGACTCCCTAGGCTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTATCAAAAATGGACGGTCGGCAAGAACTTCAGCCTCGGCGATTTTCTAATTTTTAACACCGACAACAATCACTCGGTTGTGCTTACGTATAATTTCACCACATACAAGCTATGCGACTACGACGACGCATCGGAACATGACACGACAGAATGGTCCGCTGCTGACCCGTCGGCGACCACTCCATACGCCGTGACGGTGGCCGTCCCACTGCTAAAAGAAGGGACCAACTATTTCTTCTCCGGCCACTACGACGGAGAGCAATGTCAAAATGGGCAACAATTCAAAATAAACGTCACTCACGGACAGGGCCTCCCGAAGAGCATGAGAGATTCTTCCGACGAAGCTCCTGCTCCTGTAGTTCCCGACACCGGCGACCAAACTGAATCTGCTCCCGACACCATTGTCCCTTCCAACTTCGACAATCCCGTAAACGACGTAGCTGATAGCGACAAGGAGGTTTCGGGCTCCGTTTCGCTATCGCTTCACTCGAAGTTTAATGAGTTTTTCTTCGTGTTAGCTGGTATTGCCTCTGCCTGCATTTTTCTCTGTACTGAATGA | 720 | 50.83 | MEQRKYRADLLSPAFLVLLLFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDNNHSVVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTVAVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTESAPDTIVPSNFDNPVNDVADSDKEVSGSVSLSLHSKFNEFFFVLAGIASACIFLCTE | 239 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 690083 | 692791 | - | CmoCh20G001350.1 | Cmo20g00135 | 404452 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo20g00135 | 239 | ProSiteProfiles | Phytocyanin domain profile. | 34 | 154 | IPR003245 | GO:0009055 | |
Cmo20g00135 | 239 | CDD | Phytocyanin | 34 | 152 | - | - | |
Cmo20g00135 | 239 | PANTHER | BLUE COPPER PROTEIN | 12 | 220 | IPR039391 | GO:0009055 | |
Cmo20g00135 | 239 | Gene3D | - | 33 | 157 | IPR008972 | - | |
Cmo20g00135 | 239 | MobiDBLite | consensus disorder prediction | 180 | 194 | - | - | |
Cmo20g00135 | 239 | Pfam | Plastocyanin-like domain | 44 | 146 | IPR003245 | GO:0009055 | |
Cmo20g00135 | 239 | SUPERFAMILY | Cupredoxins | 34 | 152 | IPR008972 | - | |
Cmo20g00135 | 239 | MobiDBLite | consensus disorder prediction | 157 | 194 | - | - | |
Cmo20g00135 | 239 | PANTHER | BNAA08G26900D PROTEIN | 12 | 220 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo08g00916 | Cmo-Chr8:5975372 | Cmo20g00135 | Cmo-Chr20:690083 | 1.42E-34 | dispersed | |
Cmo17g00026 | Cmo-Chr17:124963 | Cmo20g00135 | Cmo-Chr20:690083 | 9.58E-38 | dispersed | |
Cmo20g00135 | Cmo-Chr20:690083 | Cmo05g00540 | Cmo-Chr5:2612412 | 3.96E-14 | dispersed | |
Cmo20g00135 | Cmo-Chr20:690083 | Cmo02g01329 | Cmo-Chr2:7897001 | 9.57E-145 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo20g00135 | - | - | cpep:111776932 | 465.692 |