Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00137 ATGAATATTGCTCTCACAACATTGCTCATCTTCCTCGCAGCCTTTGCACCCATCTCTTCTGCTACAACAGAGGTTCCTGCAGAGAAGTCGCAGTTAGAAGCTTGGTTTTCCGGACATGTGAAGCCCTTAGCCGACCGCAAGGCGGAGCTTGATCCAGCCCTTGTGGCCGCTGAAGAAAGCTCCACCGTCGTGAAAGTAAGGGCCGACGGAAGCGGAGACTTCAAGACTGTCACCGAAGCCATCGCCAGCGTTCCAGCCGGTAACACCAAACGCGTCGTGATTTGGATTGGGAAAGGAGTTTATAAGGAGAAGCTTACGATTGAGAAAAATAAGCCATTCATTACCCTTTACGGTTCCCCTAACAATATGCCAACCTTGACATTTGATGGAGATGCCAAAAAATTCGGCACTGTTTACAGTGGAACTTTGACCGTGGAGTCCGAGTATTTTGTTGCTGCCAATCTCGTGATCGAGAACACTTCTCCAAGACCGCATGCCGGAAAAGGAGGTCCGGCATTGGCGGCGAGAATCAGAGCGAATAAAGCCGCAATTTACAATTGCAAATTCTTAGGGTTCCAAGACACCCTGTGCGACGACGACGGGATGCATGTGTACAAGGATTGCGTCATTGAAGGCACCGTGGACTTCATCTTCGGGAAGGCAACGGCCCTGTATTTGAACACTCAGCTGAATGTGCTGGGAGTCGGGGGATTGGGAGTGATTGCAGCGCATTCAAGAGAAAAGGAAGACGACCCCAGTGGATATGTGTTTGCGCATTGCAGCATTACAGGCACCGGCGGGCCAAACACTTATTTGGGAAGATCTTGGAGGCCTTGGTCCAGAGTTGTGTTTGCCTACACCACCATTGCCGACATCCTTCATCCTGAAGGCTGGGACGACATGAACAACCCCGCTTACGACAAGACGGTTTTCTTTGGAGAATACAAGTGTTCGGGGCCGGGAGCGGAGACGAGCAAACGTATAAAATTCAGCAAACAGCTGAGTGAAGCACAAGCGAAACCCTTCATCAACCTTGATTACGTGCAGGCCAAAAAGTGGCTGCTTCCTCCTCCCAAACTATAG 1083 50.51 MNIALTTLLIFLAAFAPISSATTEVPAEKSQLEAWFSGHVKPLADRKAELDPALVAAEESSTVVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGKGVYKEKLTIEKNKPFITLYGSPNNMPTLTFDGDAKKFGTVYSGTLTVESEYFVAANLVIENTSPRPHAGKGGPALAARIRANKAAIYNCKFLGFQDTLCDDDGMHVYKDCVIEGTVDFIFGKATALYLNTQLNVLGVGGLGVIAAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDMNNPAYDKTVFFGEYKCSGPGAETSKRIKFSKQLSEAQAKPFINLDYVQAKKWLLPPPKL 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 696185 697339 - CmoCh20G001370.1 Cmo20g00137 404454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00137 360 Pfam Pectinesterase 64 349 IPR000070 GO:0030599|GO:0042545
Cmo20g00137 360 SUPERFAMILY Pectin lyase-like 60 354 IPR011050 -
Cmo20g00137 360 Gene3D - 57 356 IPR012334 -
Cmo20g00137 360 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 29 355 - -
Cmo20g00137 360 ProSitePatterns Pectinesterase signature 2. 210 219 IPR033131 -
Cmo20g00137 360 PANTHER PECTINESTERASE 63-RELATED 29 355 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo20g00137 Cmo-Chr20:696185 Cmo20g00147 Cmo-Chr20:720335 0 dispersed
Cmo20g00137 Cmo-Chr20:696185 Cmo20g00141 Cmo-Chr20:706436 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00137 K01051 - csv:101205095 494.967