Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00234 ATGAAGCTGAAGAATCTGATGGAAAACAAGCAATTGGATTTCAATCAGCCGTTTCTTTCTGTGAGGCGGGTTTCGTCGATGGAAATGTCGTTGAAAGCTAACGAAACAGTGATAACGGAGAATCGCTGGCCGCCTCTTCCTGTCTACAAGTCGGAATTGAAATCAGGTCCAGTGAGTAATCCGGGGAATGTTCCTTTTCTATGGGAACATGCCCCAGGAAGGCCCAAAGATGGAAGAAAATCACTAACCATAGGTTCTAAATCGCCGTTGGCTGCTCCGAAACACCCTTCTGGGATGTCGTCGGGTTCAGAACAACAGCATTGTAACAGCAAAGAGTCAACAAGTGGAGGAGAAGCACTTCCAAATTCTGACCATTCCCCTGCTCATAAGAACATCGTTAAGTTTAAGACCTTGAGGGAGAGGATCGAGAGAGATTTAAGTTCTGATTCGGAGGACGGAGACGAGACTTATCTCGATGCAAATGGCACCATTTCTAGATCCGAGTCATTTTCCATGAACTGCAGTGTAACTGGTTTGAGTGGACTGGATGGTGGTGATGTTAAACCATCGGGATCGTTCTCGAAAGATCAGCGAACTCACGACATAATGATGGGACGATTCCTGCCTGCTGCCAAGGCAATGGCTTCAGAAACACCTCAAGTTGCTCATAGAAAGCAAAGTGTTCAAAGAGAGCACCGAAAAGAGGCAAAGAAGTTGATTAGAATGGGTAAGGAACATCGAGTAAATTCACTTCCACCGGTGTTGCCATCATATTATGTGCCTCCGAATCCACACGACGTTGAAGAAATAAGCGAAGACGATGATATTAGCCTCGACGAATCTGAGTACTCATCTACTAAATCTTGTGGTTTGTTCGCTCGATTTTGCCTTCTACACCCAGTTCCCGGAATGAGAACGCAAAGCGCCTCTGTCGCTTCAGCTCCTCGAGTTCAGAATGATTATTTGACTGATGGTTCTTGCAGCAGCATTAAGGTTCTTGGGATACTTTTCTCTTTAATTCATTGGATATTGTCATGTCAAGTCTTCTCAGTTGTGTTTTGTTTGGTCGTATATTCACAGAATCTTAGGAACGAGGAAAAACCGCTCGATGCGAACCAGATGGTTGAGAGCACGCCAAACGACTCGAGAAGGCGATACAAATCTCACCTTTCTGAAGAAAAAGTTTTCCCCAGTGACCCAGTAGGAGTTAAGAGTTCCATACATAGAAGAGCAGGAACCAAATTTCGTGAATTGTTAGCCAACGAATCGTCTTCGGTGAGCCCCTTTGTCATCGAGAAAACGTCGCTCGTAGATTCCGTTCACAATATGAAGTCTCGGAGTTCAAATTCAAGCTCTAAAGAGAATCTTCATTTGGATTCTTCCCCTCAACATGTCCAGCCATTAAATGTTGAAGGTGAAAACAAGAGGTTGAGCTCTACGAGTATCGACTCGATGGATTTGTGTTCATCTTATTACGATATGAAAGCGAACTTGAAGGCGACACGGTTGGACGTAGATCTAATCCATGATGCAAAAGTGACAGATGAAAGAACAATTGATTCTGAATGTGATCATCATAAAAAATCAAGTCAAGGAGAAAGCTCAGATGACTCTTTTCAGGATTTTGTCTCATTTACGAGTTCAGAAGCTTCGAAGCTACGTTTAGAAGGCCACGACCAGGATTCAATCACATCGACAAGCTCAAGAGCCACGGCGCGAGGCAAAATCGATCTCGAAAGCACTCGTCGATCAAAAAGATCCTTGTCCATTTCTTCACAGCTTGCACTTGCTCCACCTCTACCAAAATCTCCATCCGAGTCCTGGCTTAAGCGCACGTTGCCAACCGTTTCGTCGAGAAACTCGATGCCAAAGTCTAGGCTGGATGCTCGTGTTTACTCTACAAGGCAAACCAACACTGTATTCTGA 1926 44.55 MKLKNLMENKQLDFNQPFLSVRRVSSMEMSLKANETVITENRWPPLPVYKSELKSGPVSNPGNVPFLWEHAPGRPKDGRKSLTIGSKSPLAAPKHPSGMSSGSEQQHCNSKESTSGGEALPNSDHSPAHKNIVKFKTLRERIERDLSSDSEDGDETYLDANGTISRSESFSMNCSVTGLSGLDGGDVKPSGSFSKDQRTHDIMMGRFLPAAKAMASETPQVAHRKQSVQREHRKEAKKLIRMGKEHRVNSLPPVLPSYYVPPNPHDVEEISEDDDISLDESEYSSTKSCGLFARFCLLHPVPGMRTQSASVASAPRVQNDYLTDGSCSSIKVLGILFSLIHWILSCQVFSVVFCLVVYSQNLRNEEKPLDANQMVESTPNDSRRRYKSHLSEEKVFPSDPVGVKSSIHRRAGTKFRELLANESSSVSPFVIEKTSLVDSVHNMKSRSSNSSSKENLHLDSSPQHVQPLNVEGENKRLSSTSIDSMDLCSSYYDMKANLKATRLDVDLIHDAKVTDERTIDSECDHHKKSSQGESSDDSFQDFVSFTSSEASKLRLEGHDQDSITSTSSRATARGKIDLESTRRSKRSLSISSQLALAPPLPKSPSESWLKRTLPTVSSRNSMPKSRLDARVYSTRQTNTVF 641
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
20 1134519 1136444 - CmoCh20G002340.1 Cmo20g00234 404551
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00234 641 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 367 637 - -
Cmo20g00234 641 MobiDBLite consensus disorder prediction 370 391 - -
Cmo20g00234 641 MobiDBLite consensus disorder prediction 518 539 - -
Cmo20g00234 641 MobiDBLite consensus disorder prediction 518 534 - -
Cmo20g00234 641 MobiDBLite consensus disorder prediction 560 574 - -
Cmo20g00234 641 MobiDBLite consensus disorder prediction 553 624 - -
Cmo20g00234 641 MobiDBLite consensus disorder prediction 608 624 - -
Cmo20g00234 641 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 7 320 - -
Cmo20g00234 641 MobiDBLite consensus disorder prediction 98 121 - -
Cmo20g00234 641 Pfam Protein of unknown function (DUF688) 7 312 IPR007789 -
Cmo20g00234 641 MobiDBLite consensus disorder prediction 67 136 - -
Cmo20g00234 641 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 367 637 - -
Cmo20g00234 641 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 7 320 - -
Cmo20g00234 641 MobiDBLite consensus disorder prediction 440 479 - -
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00627 Cmo-Chr13:6765316 Cmo20g00234 Cmo-Chr20:1134519 6.61E-37 dispersed
Cmo19g01057 Cmo-Chr19:9174264 Cmo20g00234 Cmo-Chr20:1134519 6.46E-75 wgd
Cmo02g00084 Cmo-Chr2:434986 Cmo20g00234 Cmo-Chr20:1134519 6.29E-32 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00234 - - cmax:111483832 1043.49