Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo20g00234 | ATGAAGCTGAAGAATCTGATGGAAAACAAGCAATTGGATTTCAATCAGCCGTTTCTTTCTGTGAGGCGGGTTTCGTCGATGGAAATGTCGTTGAAAGCTAACGAAACAGTGATAACGGAGAATCGCTGGCCGCCTCTTCCTGTCTACAAGTCGGAATTGAAATCAGGTCCAGTGAGTAATCCGGGGAATGTTCCTTTTCTATGGGAACATGCCCCAGGAAGGCCCAAAGATGGAAGAAAATCACTAACCATAGGTTCTAAATCGCCGTTGGCTGCTCCGAAACACCCTTCTGGGATGTCGTCGGGTTCAGAACAACAGCATTGTAACAGCAAAGAGTCAACAAGTGGAGGAGAAGCACTTCCAAATTCTGACCATTCCCCTGCTCATAAGAACATCGTTAAGTTTAAGACCTTGAGGGAGAGGATCGAGAGAGATTTAAGTTCTGATTCGGAGGACGGAGACGAGACTTATCTCGATGCAAATGGCACCATTTCTAGATCCGAGTCATTTTCCATGAACTGCAGTGTAACTGGTTTGAGTGGACTGGATGGTGGTGATGTTAAACCATCGGGATCGTTCTCGAAAGATCAGCGAACTCACGACATAATGATGGGACGATTCCTGCCTGCTGCCAAGGCAATGGCTTCAGAAACACCTCAAGTTGCTCATAGAAAGCAAAGTGTTCAAAGAGAGCACCGAAAAGAGGCAAAGAAGTTGATTAGAATGGGTAAGGAACATCGAGTAAATTCACTTCCACCGGTGTTGCCATCATATTATGTGCCTCCGAATCCACACGACGTTGAAGAAATAAGCGAAGACGATGATATTAGCCTCGACGAATCTGAGTACTCATCTACTAAATCTTGTGGTTTGTTCGCTCGATTTTGCCTTCTACACCCAGTTCCCGGAATGAGAACGCAAAGCGCCTCTGTCGCTTCAGCTCCTCGAGTTCAGAATGATTATTTGACTGATGGTTCTTGCAGCAGCATTAAGGTTCTTGGGATACTTTTCTCTTTAATTCATTGGATATTGTCATGTCAAGTCTTCTCAGTTGTGTTTTGTTTGGTCGTATATTCACAGAATCTTAGGAACGAGGAAAAACCGCTCGATGCGAACCAGATGGTTGAGAGCACGCCAAACGACTCGAGAAGGCGATACAAATCTCACCTTTCTGAAGAAAAAGTTTTCCCCAGTGACCCAGTAGGAGTTAAGAGTTCCATACATAGAAGAGCAGGAACCAAATTTCGTGAATTGTTAGCCAACGAATCGTCTTCGGTGAGCCCCTTTGTCATCGAGAAAACGTCGCTCGTAGATTCCGTTCACAATATGAAGTCTCGGAGTTCAAATTCAAGCTCTAAAGAGAATCTTCATTTGGATTCTTCCCCTCAACATGTCCAGCCATTAAATGTTGAAGGTGAAAACAAGAGGTTGAGCTCTACGAGTATCGACTCGATGGATTTGTGTTCATCTTATTACGATATGAAAGCGAACTTGAAGGCGACACGGTTGGACGTAGATCTAATCCATGATGCAAAAGTGACAGATGAAAGAACAATTGATTCTGAATGTGATCATCATAAAAAATCAAGTCAAGGAGAAAGCTCAGATGACTCTTTTCAGGATTTTGTCTCATTTACGAGTTCAGAAGCTTCGAAGCTACGTTTAGAAGGCCACGACCAGGATTCAATCACATCGACAAGCTCAAGAGCCACGGCGCGAGGCAAAATCGATCTCGAAAGCACTCGTCGATCAAAAAGATCCTTGTCCATTTCTTCACAGCTTGCACTTGCTCCACCTCTACCAAAATCTCCATCCGAGTCCTGGCTTAAGCGCACGTTGCCAACCGTTTCGTCGAGAAACTCGATGCCAAAGTCTAGGCTGGATGCTCGTGTTTACTCTACAAGGCAAACCAACACTGTATTCTGA | 1926 | 44.55 | MKLKNLMENKQLDFNQPFLSVRRVSSMEMSLKANETVITENRWPPLPVYKSELKSGPVSNPGNVPFLWEHAPGRPKDGRKSLTIGSKSPLAAPKHPSGMSSGSEQQHCNSKESTSGGEALPNSDHSPAHKNIVKFKTLRERIERDLSSDSEDGDETYLDANGTISRSESFSMNCSVTGLSGLDGGDVKPSGSFSKDQRTHDIMMGRFLPAAKAMASETPQVAHRKQSVQREHRKEAKKLIRMGKEHRVNSLPPVLPSYYVPPNPHDVEEISEDDDISLDESEYSSTKSCGLFARFCLLHPVPGMRTQSASVASAPRVQNDYLTDGSCSSIKVLGILFSLIHWILSCQVFSVVFCLVVYSQNLRNEEKPLDANQMVESTPNDSRRRYKSHLSEEKVFPSDPVGVKSSIHRRAGTKFRELLANESSSVSPFVIEKTSLVDSVHNMKSRSSNSSSKENLHLDSSPQHVQPLNVEGENKRLSSTSIDSMDLCSSYYDMKANLKATRLDVDLIHDAKVTDERTIDSECDHHKKSSQGESSDDSFQDFVSFTSSEASKLRLEGHDQDSITSTSSRATARGKIDLESTRRSKRSLSISSQLALAPPLPKSPSESWLKRTLPTVSSRNSMPKSRLDARVYSTRQTNTVF | 641 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 1134519 | 1136444 | - | CmoCh20G002340.1 | Cmo20g00234 | 404551 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo20g00234 | 641 | PANTHER | N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED | 367 | 637 | - | - | |
Cmo20g00234 | 641 | MobiDBLite | consensus disorder prediction | 370 | 391 | - | - | |
Cmo20g00234 | 641 | MobiDBLite | consensus disorder prediction | 518 | 539 | - | - | |
Cmo20g00234 | 641 | MobiDBLite | consensus disorder prediction | 518 | 534 | - | - | |
Cmo20g00234 | 641 | MobiDBLite | consensus disorder prediction | 560 | 574 | - | - | |
Cmo20g00234 | 641 | MobiDBLite | consensus disorder prediction | 553 | 624 | - | - | |
Cmo20g00234 | 641 | MobiDBLite | consensus disorder prediction | 608 | 624 | - | - | |
Cmo20g00234 | 641 | PANTHER | N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED | 7 | 320 | - | - | |
Cmo20g00234 | 641 | MobiDBLite | consensus disorder prediction | 98 | 121 | - | - | |
Cmo20g00234 | 641 | Pfam | Protein of unknown function (DUF688) | 7 | 312 | IPR007789 | - | |
Cmo20g00234 | 641 | MobiDBLite | consensus disorder prediction | 67 | 136 | - | - | |
Cmo20g00234 | 641 | PANTHER | N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED | 367 | 637 | - | - | |
Cmo20g00234 | 641 | PANTHER | N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED | 7 | 320 | - | - | |
Cmo20g00234 | 641 | MobiDBLite | consensus disorder prediction | 440 | 479 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo19g00929 | Cmo20g00234 | CCT | |
Cmo11g01880 | Cmo20g00234 | CCT | |
Cmo19g00929 | Cmo20g00234 | ECH | |
Cmo11g01880 | Cmo20g00234 | ECH | |
Cmo02g00084 | Cmo20g00234 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo13g00627 | Cmo-Chr13:6765316 | Cmo20g00234 | Cmo-Chr20:1134519 | 6.61E-37 | dispersed | |
Cmo19g01057 | Cmo-Chr19:9174264 | Cmo20g00234 | Cmo-Chr20:1134519 | 6.46E-75 | wgd | |
Cmo02g00084 | Cmo-Chr2:434986 | Cmo20g00234 | Cmo-Chr20:1134519 | 6.29E-32 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo20g00234 | - | - | cmax:111483832 | 1043.49 |