Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo20g00287 | ATGGCAGCTTCATCCATGGCCCTCTCCTCCCCATCTCTCGCCGGCCAAGCCGTCAAATTGTCCCCCTCCGCCTCCGACATCCTCGGCGAATCCCGCGTCACCATGAGGAAAACCGGTGGCAGACCCAAGCCCGTCTCCTCTGGAAGCCCATGGTACGGTCCAGACCGAGTCAAGTACTTGGGTCCATTCTCCGGTGAGCCGCCGTCCTATCTGACCGGGGAATTTCCCGGCGACTACGGCTGGGACACTGCTGGGCTGTCCGCCGACCCCGAGACGTTCGCCAAAAACAGGGAGCTGGAAGTGATCCACTCGAGATGGGCCATGCTTGGGGCTCTGGGGTGCGTCTTCCCCGAGCTCCTGTCTCGCAACGGAGTCAAATTTGGCGAGGCTGTGTGGTTCAAAGCTGGGTCTCAGATCTTCAGCGAAGGTGGGCTCGACTATTTGGGGAACCCGAGCCTGGTCCACGCTCAGAGCATTTTGGCCATTTGGGCGTGTCAGGTTGTGCTGATGGGTGCGGTTGAGGGCTACAGAATTGCTGGTGGGCCTCTGGGTGAGATCACCGACCCAATTTACCCAGGTGGGAGCTTTGACCCACTGGGGCTGGCCGATGACCCTGAGGCCTTTGCAGAGCTTAAAGTGAAGGAGCTCAAAAATGGGCGATTGGCCATGTTTTCCATGTTCGGTTTCTTCGTGCAGGCCATTGTCACTGGCAAAGGACCTTTGGAGAACTTGGCCGACCATTTGGCTGACCCTGTTAACAACAATGCCTGGTCTTACGCCACTAACTTTGTACCTGGAAAGTGA | 804 | 57.96 | MAASSMALSSPSLAGQAVKLSPSASDILGESRVTMRKTGGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK | 267 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 1389168 | 1389971 | - | CmoCh20G002870.1 | Cmo20g00287 | 404604 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo20g00287 | 267 | Pfam | Chlorophyll A-B binding protein | 67 | 233 | IPR022796 | - | |
Cmo20g00287 | 267 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC | 1 | 267 | - | - | |
Cmo20g00287 | 267 | Gene3D | Chlorophyll a/b binding protein domain | 58 | 260 | - | - | |
Cmo20g00287 | 267 | MobiDBLite | consensus disorder prediction | 29 | 48 | - | - | |
Cmo20g00287 | 267 | SUPERFAMILY | Chlorophyll a-b binding protein | 50 | 264 | - | - | |
Cmo20g00287 | 267 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 267 | IPR001344 | GO:0009765|GO:0016020 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g00036 | Cmo20g00287 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00935 | Cmo-Chr1:5416812 | Cmo20g00287 | Cmo-Chr20:1389168 | 5.51E-68 | dispersed | |
Cmo07g00129 | Cmo-Chr7:701442 | Cmo20g00287 | Cmo-Chr20:1389168 | 0 | dispersed | |
Cmo07g00130 | Cmo-Chr7:703094 | Cmo20g00287 | Cmo-Chr20:1389168 | 0 | dispersed | |
Cmo13g00573 | Cmo-Chr13:6475233 | Cmo20g00287 | Cmo-Chr20:1389168 | 0 | dispersed | |
Cmo14g00978 | Cmo-Chr14:5235919 | Cmo20g00287 | Cmo-Chr20:1389168 | 7.91E-168 | dispersed | |
Cmo19g00879 | Cmo-Chr19:8410679 | Cmo20g00287 | Cmo-Chr20:1389168 | 1.12E-139 | dispersed | |
Cmo02g00036 | Cmo-Chr2:207147 | Cmo20g00287 | Cmo-Chr20:1389168 | 0 | wgd | |
Cmo20g00287 | Cmo-Chr20:1389168 | Cmo03g01376 | Cmo-Chr3:10108407 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo20g00287 | K08912 | - | csv:101213845 | 535.028 |