Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo20g00352 | ATGGCCACCGAGGCGACCGAAGCCTCGGCTAAGTTGAAGAGTCCGGATTTTCGCCCGGTACCGTCGCCTCCAGATTTCCATCCCGAGATTCTGGTCTCAGCTCATGATGGTCTTCGGTTCTGGCAGTTCATGATTGCTGGTTCAATCGCTGGGTCTGTTGAGCATATGGCTATGTTTCCGGTTGATACAGTCAAGACCCATATGCAAGCCCTTGGCTCTTGTCCAATTAAATCTGTTGGAGTTCGACAAGCGCTTCGGTCAATTTTGAAGACAGAGGGACCTGCTGGTTTTTATCGTGGTATTGGTGCTATGGGTCTTGGAGCTGGACCTGCACATGCTGTGTATTTTACAGTCTACGAGGATTGTAAGAAGTTTTTCTCTGGTGGGGATCCTAATAATTCTGTTGCCCACGCTGCTTCTGGCGTCTGTGCAACGGTGGCGAGTGACGCTGTTTTTACACCGATGGATATGGTTAAACAGAGGCTGCAGCTGAGTAATAGTCCCTACAAGGGGGTTTTGGATTGTGTCACAAGGGTCCTCAGAGACGAGGGGTTTAAAGCATTTTACGCATCATATAGAACTACAGTGTTAATGAATGCTCCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGCTGGAGGTTTCGCCAGAGATTGTAAATAATGAACAGTGGATCGTTCATGCGACGGCAGGAGCTGCTGCTGGAGCCTCAGCTGCATTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAACTACAATGTCAGGGTGTATGTGGCTGCGATAGATTCAAAAGCGGGTCGATAGAAGACGTCGTTAGGACAATACTCAAGAAGGACGGATATCGAGGGCTTATGAGGGGATGGGTTCCAAGGATGCTCTTTCACGCTCCGGCTGCTGCTATTTGCTGGTCGACATACGAAGCGATAAAATCTCTGTTCCAAGAGCTCAATGGCAGCAGTGACGAAATGACATGA | 993 | 48.44 | MATEATEASAKLKSPDFRPVPSPPDFHPEILVSAHDGLRFWQFMIAGSIAGSVEHMAMFPVDTVKTHMQALGSCPIKSVGVRQALRSILKTEGPAGFYRGIGAMGLGAGPAHAVYFTVYEDCKKFFSGGDPNNSVAHAASGVCATVASDAVFTPMDMVKQRLQLSNSPYKGVLDCVTRVLRDEGFKAFYASYRTTVLMNAPFTAVHFATYEAAKRGLLEVSPEIVNNEQWIVHATAGAAAGASAAFVTTPLDVVKTQLQCQGVCGCDRFKSGSIEDVVRTILKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEAIKSLFQELNGSSDEMT | 330 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 1733791 | 1737772 | - | CmoCh20G003520.1 | Cmo20g00352 | 404669 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo20g00352 | 330 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 228 | 318 | IPR018108 | - | |
Cmo20g00352 | 330 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 132 | 216 | IPR018108 | - | |
Cmo20g00352 | 330 | PANTHER | MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED | 5 | 326 | - | - | |
Cmo20g00352 | 330 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 38 | 125 | IPR018108 | - | |
Cmo20g00352 | 330 | Gene3D | Mitochondrial carrier domain | 25 | 166 | IPR023395 | - | |
Cmo20g00352 | 330 | Pfam | Mitochondrial carrier protein | 38 | 127 | IPR018108 | - | |
Cmo20g00352 | 330 | Pfam | Mitochondrial carrier protein | 229 | 321 | IPR018108 | - | |
Cmo20g00352 | 330 | Pfam | Mitochondrial carrier protein | 133 | 218 | IPR018108 | - | |
Cmo20g00352 | 330 | Gene3D | Mitochondrial carrier domain | 167 | 330 | IPR023395 | - | |
Cmo20g00352 | 330 | PRINTS | Mitochondrial carrier protein signature | 43 | 56 | IPR002067 | GO:0055085 | |
Cmo20g00352 | 330 | PRINTS | Mitochondrial carrier protein signature | 56 | 70 | IPR002067 | GO:0055085 | |
Cmo20g00352 | 330 | PRINTS | Mitochondrial carrier protein signature | 147 | 165 | IPR002067 | GO:0055085 | |
Cmo20g00352 | 330 | PRINTS | Mitochondrial carrier protein signature | 189 | 207 | IPR002067 | GO:0055085 | |
Cmo20g00352 | 330 | PRINTS | Mitochondrial carrier protein signature | 237 | 259 | IPR002067 | GO:0055085 | |
Cmo20g00352 | 330 | PANTHER | MITOFERRIN-1-RELATED | 5 | 326 | - | - | |
Cmo20g00352 | 330 | SUPERFAMILY | Mitochondrial carrier | 36 | 314 | IPR023395 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g00725 | Cmo20g00352 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00342 | Cmo-Chr3:4487298 | Cmo20g00352 | Cmo-Chr20:1733791 | 5.56E-157 | dispersed | |
Cmo07g01125 | Cmo-Chr7:5926574 | Cmo20g00352 | Cmo-Chr20:1733791 | 4.22E-151 | dispersed | |
Cmo15g00582 | Cmo-Chr15:2799503 | Cmo20g00352 | Cmo-Chr20:1733791 | 4.86E-10 | dispersed | |
Cmo02g00725 | Cmo-Chr2:4581054 | Cmo20g00352 | Cmo-Chr20:1733791 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo20g00352 | K15113 | - | csv:101215924 | 617.461 |