Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00463 ATGAGCAAAGGTTTTTGGATGACTAAGGGTCCTGGGCATGAAAATGATGCAAATTCAACTTTTGACAGCCCATCATTACTAGACACTAAGCGGGCACATCACTGGTTTATAGATGGTTGTGAGACACAGGTTTTCCCCAACAAGAAACAAGCAATTCAAGCTTCGAATAGTAAAATGACCGGAGCGCTGTCAAATGTGAATGTTCTTCCTTGGGATCATCATGCTGCTAATTATCAGTCTGTTTCACATCAACTTATCGGTCGCCTACTTGGACCTGAATCAATAAGGTCCGCTGACTTCGATCTAACAAAAACATCTTCTGTAATGTCTGATAATTTGGATCTCAGGAGAAAAGGTATTGAAGTTGAAGAGCAATATGGAGAGGATGCATCTGTTGGGTTGTCTGTTTCTCATGGTTTGGAGGACCCTGAAACATGTCTTAGCTACGGAGGAATTAGAAAAGTTAAACTCAATCAGATTAAAGATAATATACATGATCTGCAACCATGTCTAAGAAGTAATTCTAATAGGGAAGATGGTGGTCAACTTACCATAGAAGGCTACTATAAGGATATCGAAACGGGTCTTGTGTCTGTGGGATCAGCCTATATTAAGGAGGATGACAGTTTCAATTTGATGAACCAAACCTCCAACGATGGGGATCGCCACATTAGGTTACTAGGTCATAATGGGAAGGTGGACGACAATGCTGTCTCCATCGGTGATGATTATGGTAAGCGGGATGCAAATATAATCTCATTTGACGGATTTCCCGATGAGCAAGATATTATCTCCTTAGGCAGGTCTCTGGGTAGCCATGACTCAACATTCTATGAACCTTCATTCCAAGCAACTGAAGCTGATGGTGTCACAGAATTGGAATCATCTAGTTTTGATGTAGGTGTAAGCTGTACACAGATAGCTAAGCAAAAGCCTGATACGATGCCGAAGAGTAGACCAGAATACAAAATGAGGAAAGAAGCTCCAAACAGCTTTCCTTCAAATGTTAGAAGCTTGATATCAACTGGTATGCTCGATGGCGTTCCTGTTAAGTATGTTTCTGTAGCCAGAGAGGAGCTTCGTGGAATTATAAGGGGATCTGGCTATCTTTGTGGATGCCAATCTTGCAACTTTTCCAAGATGCTTAATGCCTACGAGTTTGAGCGCCACGCTGGCTGCAAAACAAAACACCCAAATAATCATATATACTTCGAGAATGGGAAGACGATTTACCAAATAGTACAAGAATTAAGAAGCACCCCAGAGAGCTTGTTGTTTGATACAATTCAAACAATATTTGGTGCACCTATCAATCAGAAATCTTTTCGGATTTGGAAAGAATCATTTCAAGCAGCTACTCGTGAGCTTCAGCGCATATATGGTAAGGATGAACTTAACCTTTAG 1404 40.95 MSKGFWMTKGPGHENDANSTFDSPSLLDTKRAHHWFIDGCETQVFPNKKQAIQASNSKMTGALSNVNVLPWDHHAANYQSVSHQLIGRLLGPESIRSADFDLTKTSSVMSDNLDLRRKGIEVEEQYGEDASVGLSVSHGLEDPETCLSYGGIRKVKLNQIKDNIHDLQPCLRSNSNREDGGQLTIEGYYKDIETGLVSVGSAYIKEDDSFNLMNQTSNDGDRHIRLLGHNGKVDDNAVSIGDDYGKRDANIISFDGFPDEQDIISLGRSLGSHDSTFYEPSFQATEADGVTELESSSFDVGVSCTQIAKQKPDTMPKSRPEYKMRKEAPNSFPSNVRSLISTGMLDGVPVKYVSVAREELRGIIRGSGYLCGCQSCNFSKMLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTIFGAPINQKSFRIWKESFQAATRELQRIYGKDELNL 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2147031 2149786 - CmoCh20G004630.1 Cmo20g00463 404780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00463 467 Pfam Tify domain binding domain 362 417 IPR032308 -
Cmo20g00463 467 MobiDBLite consensus disorder prediction 1 22 - -
Cmo20g00463 467 PANTHER AUTOIMMUNE REGULATOR 2 467 - -
Cmo20g00463 467 PANTHER DNA-BINDING PROTEIN 2 467 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00831 Cmo20g00463 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo20g00463 Cmo-Chr20:2147031 Cmo06g00409 Cmo-Chr6:1968813 1.21E-15 dispersed
Cmo14g00154 Cmo-Chr14:674389 Cmo20g00463 Cmo-Chr20:2147031 2.10E-43 wgd
Cmo02g00831 Cmo-Chr2:5051530 Cmo20g00463 Cmo-Chr20:2147031 0 wgd
Cmo20g00463 Cmo-Chr20:2147031 Cmo04g01272 Cmo-Chr4:6453158 1.68E-41 wgd
Cmo20g00463 Cmo-Chr20:2147031 Cmo04g00229 Cmo-Chr4:1146103 7.00E-43 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00463 - - bhj:120089449 869.381