Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00495 ATGGACGACTTCTTAGACAATATACCGTCCATGGATCTGATGCGTTCCGAGAAGATGACTTTTGTTCAGCTTATTATCCCCGTTGAGTCCGCTCATCGAGCCATTTCGTACCTTGGCGAGCTTGGCATCCTTCAATTTAGAGATTTAAACGTGGACAAAAGTCCTTTCCAGAGAACCTTTGTTAACCAGGTAAAGCGATGTGCAGAGATGTCAAGGAAGTTACGATTTTTCAAAGATCAAATCAGTAAAGCTGGTGTACTGGCATCTACACGCCCAATTCTTCAAGAACATATTGAGCTAGAGAATTTAGAGATACGACTAGCTGATCATGAGCATGAGCTGATTGAAATGAACTCAAACAGCGAGAAACTTCAACAGTCATATAATGAACTATTAGAATTCAAGATGGTATTGCAAAAGGCAAGCGTCTTTCTGGTGTCCAGTAATAGCCATTCAGTTTCAGAAGAAAGGGAGTTGAATGAAAATGTTTTCTTGAATGATAACTATACCGAGGATGGATCATTACTTGAACAGGTTGATAAAACAGTATTTGTAGTGTTTTTCTCTGGGGAGCAGGCCAGAAATAAAGTTTTGAAGATCTGTGAGGCTTTTGGAGCAAATTGCTATCCTGTTCCTGAAGATATAACCAAACAAAGGCAGATAACTAGAGAAGTTTCATCACGCCTCACTGAACTTGAAGCCACTTTAGATGCTGGGATCCGTCACCGAAATGAGGCTCTTGCATCAATAGGATTTCACTTGATTAAATGGATGAATATGGTAAGAAGGGAAAAGGCTGTATATGACACATTGAATATGTTGAATTTTGATGTCACTAAAAAATGTCTTGTTGGAGAAGGCTGGTGCCCAATCTTTGCAAAATCTCAGATTCAGGAAGCTCTGCAACGAGCAACATTTGATAGCAGTTCACAAGTGGGGATAATATTTCATGTGATGGATACGTTTGTCCATGACAGCAAGTGCGATGATGTGCCAGTGTTGTATCGATGCAATGTTGCTAGATATCAAGAAGCAAATCCTGCAGTTTACACTGTTATTACATTTCCATTCCTATTCGCAGTGATGTTTGGGGATTGGGGTCATGGAATATGTTTGTTGCTTGGAGCTTTATTTCTTATAGCTCGTGAAAGTAAGCTCAATAATCAGAAATTAGGAAGCTTTATGGAGATGCTATTTGGTGGACGCTATGTTCTTCTTTTGATGTCACTTTTTTCAATTTATTGTGGGTTGATCTACAATGAGTTCTTCTCTGTTCCGTATCATATATTCGGCGCGTCTGCCTACAAGTGTAGAGATATCACATGCAGTGATGTACACACTGTTGGGTTAGTTAAATACCGCGATGCCTATCCATTTGGTGTTGACCCAAGTTGGCGCGGAAGTCGTTCAGAACTTCCTTTTCTGAACTCTCTTAAAATGAAGTTATCTATCTTGTTGGGTATTGCCCAAATGAACTTGGGGATCATATTGAGTTACTTTAATGCACGCTTTACTGGAAGCTCACTCGATATCAGGTACCAGTTTGTACCACAAGTGATTTTTCTTAACAGCCTCTTCGGGTATCTATCTCTTCTCATTGTCATCAAGTGGTGCACTGGATCTCAAGCAGACCTCTATCATGTGATGATTTACATGTTTTTAAGCCCATTTGATGATCTTGGTGAGAACGAATTGTTTTGGGGCCAAAGACCTCTTCAAATTATCTTGTTGATGTTGGCTATAGTTGCAGTGCCTTGGATGCTTTTCCCTAAACCCTTTATTTTGAAAAAGATTCACACAGAGAGATTTCAAGGTCGTACTTATGGGATGCTTGGAACCTCTGAGATGGATCTTGAAGTGGAACCTGATTCGGCAAGGCAACACCAAGAGGATTTCAATTTTAGTGAGATCTTTGTTCACCAAATGATTCACTCCATAGAATTCGTCTTGGGTGCAGTTTCAAATACAGCGTCGTATCTCCGACTTTGGGCTTTAAGCTTGGCGCACTCAGAACTGTCAACAGTTTTCTACGAGAAAGTACTCCTCCTAGCTTGGGGGTATGACAGCTTTGTCATTCGGCTGATTGGATTAGCTGTTTTTTCGTTTGCCACTGCTTTCATACTTCTCATGATGGAGACCCTTAGTGCCTTCCTTCATGCCTTACGTCTCCATTGGGTTGAGTTTCAAAATAAGTTCTACCATGGAATGGACTGTGAGTTAGCGGAAATTTGCAGTAGAGAAATCGGTACTCCTCGATCAAGAAACTTCTCTCGCAGATTCAGTGCTTCCGAGATTATTGTAAAGCAACTGAATCTTGAGAAGAAGTTAAATGGTCACGATGGCTGTGTAAACGCTGTAGAGTTTAACTCGACTGGCGATCTTCTCGTGTCCGGTTCCGATGACTGTAAAGTTATACTATGGGATTGGGCAAGAAATTCCGAGAGGTTTTCGTATCCTTCTGGTCACCTCGACAACATATTCCAGACCAAAATTATGCCATTCACTAATGATCAGAAAATAGTTACTTCGGCTGCAGATGGAAAGGTGATTTTCCATAATATGAAAGTTGTTGCAAAAATGTTGGGGGAGCACCAAGGCTCTGTTCATGAGCTTGCTGTGGAGCCTGGAAGCCCACACATACTTTATAGCTGTGGTGAAGATGGTCTTGTGCAGCATTTCGATTTACGCAATTCTTCTGCAATAAAACTTTTCTATTGCACCTCCTTTGCTGAAAGGAGCAAGCAGCCTCCTAAAGTTGTTGGACTGAATGCCATTGTAAATGACCCAAGAAATCCAAATTACTTTGCGTTGGGTGGTTCGGATGAATACGCACGCTTATACGATTTGAGAAACTGCGGCGGTGGTGCATTTTCGACGTCGAATAGAGTTCTTGATACTTTCTGCCCGCACCATTTGATCCAAACTAACAATTTCCATATCACGGGTTTGGCTTTCTCAAATTCAAGTGAGCTGCTAGTAACTTACAGTGATGAGCTTATTTATTTGTTTCAGAAGAATATGGGGTTAGGCCCTTCACCATTGACTGTGTCATCTGAGAATTTGTTGCGGAAACTTAAACGGCCACAGGTTTACTCAGGACATAGAAATTCAGCAACAGTTAAAGGTGTGAATTTCTTTGGCTCAAATTCTGAATATGTTGTGAGTGGCTCTGATTGTGGTCATATATATATTTGGAAGAAGAAGGGAGCTGTGCTTGTGAAGTTAATGGTGGGTGATCGGAATGTTGTGAATCATATCGAGCCCCATCCACATTTGCCTATTCTTGCTACGTGTGGCATTGAAAAAAATGTGAAGATTTGGACTCCTATGGCTTGTGATGTTCCTCCATTGCCTGATGACATTGAACAAATAATGGAGTCCAATAGGCAAGGAAGGGAAGACCACTCGAGGGTGACCCTTACTCCCGACGTTATCATGCATGTCCTGCGCCTGCAAAGAAGGCAAGCATCTGCATTTACAGAACGAAGATACAGCGCAGGCGATATCGGCAGCGATGAAGACAATGAATGGGAAGCTCAGAATCTGGAGTTCCTTGATGGTAATGTTTCTTTTGAAGAAGATTCAACAGAATATTCATCTGACTGTAACATCAGCTAG 3618 41.38 MDDFLDNIPSMDLMRSEKMTFVQLIIPVESAHRAISYLGELGILQFRDLNVDKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGVLASTRPILQEHIELENLEIRLADHEHELIEMNSNSEKLQQSYNELLEFKMVLQKASVFLVSSNSHSVSEERELNENVFLNDNYTEDGSLLEQVDKTVFVVFFSGEQARNKVLKICEAFGANCYPVPEDITKQRQITREVSSRLTELEATLDAGIRHRNEALASIGFHLIKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKSQIQEALQRATFDSSSQVGIIFHVMDTFVHDSKCDDVPVLYRCNVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALFLIARESKLNNQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPYHIFGASAYKCRDITCSDVHTVGLVKYRDAYPFGVDPSWRGSRSELPFLNSLKMKLSILLGIAQMNLGIILSYFNARFTGSSLDIRYQFVPQVIFLNSLFGYLSLLIVIKWCTGSQADLYHVMIYMFLSPFDDLGENELFWGQRPLQIILLMLAIVAVPWMLFPKPFILKKIHTERFQGRTYGMLGTSEMDLEVEPDSARQHQEDFNFSEIFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDSFVIRLIGLAVFSFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGMDCELAEICSREIGTPRSRNFSRRFSASEIIVKQLNLEKKLNGHDGCVNAVEFNSTGDLLVSGSDDCKVILWDWARNSERFSYPSGHLDNIFQTKIMPFTNDQKIVTSAADGKVIFHNMKVVAKMLGEHQGSVHELAVEPGSPHILYSCGEDGLVQHFDLRNSSAIKLFYCTSFAERSKQPPKVVGLNAIVNDPRNPNYFALGGSDEYARLYDLRNCGGGAFSTSNRVLDTFCPHHLIQTNNFHITGLAFSNSSELLVTYSDELIYLFQKNMGLGPSPLTVSSENLLRKLKRPQVYSGHRNSATVKGVNFFGSNSEYVVSGSDCGHIYIWKKKGAVLVKLMVGDRNVVNHIEPHPHLPILATCGIEKNVKIWTPMACDVPPLPDDIEQIMESNRQGREDHSRVTLTPDVIMHVLRLQRRQASAFTERRYSAGDIGSDEDNEWEAQNLEFLDGNVSFEEDSTEYSSDCNIS 1205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2343070 2358216 - CmoCh20G004950.1 Cmo20g00495 404812

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00495 1205 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 776 808 - -
Cmo20g00495 1205 PANTHER VACUOLAR PROTON ATPASE A1 5 178 - -
Cmo20g00495 1205 ProSiteProfiles Trp-Asp (WD) repeats profile. 776 808 IPR001680 GO:0005515
Cmo20g00495 1205 PANTHER VACUOLAR PROTON ATPASES 5 178 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cmo20g00495 1205 SMART WD40_4 854 894 IPR001680 GO:0005515
Cmo20g00495 1205 SMART WD40_4 811 853 IPR001680 GO:0005515
Cmo20g00495 1205 SMART WD40_4 1069 1108 IPR001680 GO:0005515
Cmo20g00495 1205 SMART WD40_4 1024 1066 IPR001680 GO:0005515
Cmo20g00495 1205 SMART WD40_4 769 808 IPR001680 GO:0005515
Cmo20g00495 1205 SMART WD40_4 966 1004 IPR001680 GO:0005515
Cmo20g00495 1205 SMART WD40_4 913 948 IPR001680 GO:0005515
Cmo20g00495 1205 Coils Coil 93 127 - -
Cmo20g00495 1205 Pfam WD domain, G-beta repeat 773 808 IPR001680 GO:0005515
Cmo20g00495 1205 Pfam WD domain, G-beta repeat 1029 1066 IPR001680 GO:0005515
Cmo20g00495 1205 Gene3D - 761 1109 IPR015943 GO:0005515
Cmo20g00495 1205 PANTHER VACUOLAR PROTON ATPASES 178 736 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cmo20g00495 1205 SUPERFAMILY WD40 repeat-like 768 1107 IPR036322 GO:0005515
Cmo20g00495 1205 Pfam V-type ATPase 116kDa subunit family 37 158 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cmo20g00495 1205 Pfam V-type ATPase 116kDa subunit family 162 736 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cmo20g00495 1205 PANTHER VACUOLAR PROTON ATPASE A1 178 736 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00495 K02154 ATPeV0A, ATP6N; V-type H+-transporting ATPase subunit a - csv:101216514 1324.69
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cmo02g00864 Cmo20g00495 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01684 Cmo-Chr1:12686449 Cmo20g00495 Cmo-Chr20:2343070 3.66E-16 dispersed
Cmo05g00282 Cmo-Chr5:1227643 Cmo20g00495 Cmo-Chr20:2343070 5.45E-18 dispersed
Cmo05g00283 Cmo-Chr5:1229737 Cmo20g00495 Cmo-Chr20:2343070 1.32E-18 dispersed
Cmo12g00383 Cmo-Chr12:2370897 Cmo20g00495 Cmo-Chr20:2343070 8.10E-94 dispersed
Cmo19g00696 Cmo-Chr19:7351871 Cmo20g00495 Cmo-Chr20:2343070 0 dispersed
Cmo19g00770 Cmo-Chr19:7777696 Cmo20g00495 Cmo-Chr20:2343070 1.49E-140 transposed
Cmo02g00864 Cmo-Chr2:5255585 Cmo20g00495 Cmo-Chr20:2343070 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g328 . . Bda02g00785 Bda09g01479 Bpe01g00166 . . . . . . . . . . Cpe05g00871 . . . . . . . . Cla02g02031 Cam02g2151 Cec02g2193 Cco02g2230 Clacu02g2138 Cmu02g2073 Cre02g2386 . . . . . . Chy11g01306 Cme11g01758 . . . . Bpe08g00136 . Bma07g00127 . Sed01g0903 Cmo02g00864 Cmo20g00495 Cma02g00864 Cma20g00461 Car02g00626 Car20g00400 . . Bhi10g00598 Tan05g0297 Cmetu03g1529 . Hepe08g0853 . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmo12g00543 . 54 1179 Primary Pumps ATPases(2) AT1G10130 72.0 0.0e+00 1525.0
Cmo02g00864 CST 1 811 Primary Pumps ATPases(2) AT2G28520 80.0 0.0e+00 1315.8
Cmo20g00495 CST 1 735 Primary Pumps ATPases(2) AT2G28520 72.8 0.0e+00 1141.7
Cmo19g00696 . 833 1616 Primary Pumps ATPases(2) AT2G28520 55.2 1.2e-244 843.6
Cmo11g01111 . 10 418 Primary Pumps ATPases(2) AT2G28520 52.6 8.6e-121 432.2
Cmo19g00696 . 829 1621 Primary Pumps ATPases(2) AT2G21410 65.8 9.3e-309 1056.6
Cmo02g00864 CST 9 816 Primary Pumps ATPases(2) AT2G21410 62.3 6.3e-297 1017.3
Cmo20g00495 CST 9 749 Primary Pumps ATPases(2) AT2G21410 56.6 7.5e-258 887.5
Cmo12g00383 CST 1 693 Primary Pumps ATPases(2) AT2G21410 57.1 5.9e-247 851.3
Cmo11g01111 . 6 418 Primary Pumps ATPases(2) AT2G21410 69.1 4.4e-165 579.3
Cmo19g00696 . 831 1621 Primary Pumps ATPases(2) AT4G39080 66.4 2.7e-308 1055.0
Cmo02g00864 CST 9 816 Primary Pumps ATPases(2) AT4G39080 63.5 2.2e-297 1018.8
Cmo20g00495 CST 9 735 Primary Pumps ATPases(2) AT4G39080 58.3 3.4e-258 888.6
Cmo12g00383 CST 1 693 Primary Pumps ATPases(2) AT4G39080 57.2 9.5e-245 844.0
Cmo11g01111 . 8 418 Primary Pumps ATPases(2) AT4G39080 70.4 1.1e-165 581.3
Cmo01g01447 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cmo09g00788 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cmo12g00375 CST 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cmo05g00294 . 235 366 Primary Pumps ATPases(2) AT4G34720 100.0 3.4e-57 218.4
Cmo12g00374 . 103 234 Primary Pumps ATPases(2) AT4G34720 100.0 3.4e-57 218.4
Cmo05g00293 CST 28 122 Primary Pumps ATPases(2) AT4G34720 98.9 2.7e-38 155.6
Cmo12g00375 CST 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 1.1e-66 250.4
Cmo01g01447 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.3 4.3e-66 248.4
Cmo09g00788 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.3 4.3e-66 248.4
Cmo05g00294 . 209 366 Primary Pumps ATPases(2) AT1G75630 80.7 3.4e-63 238.8
Cmo12g00374 . 77 234 Primary Pumps ATPases(2) AT1G75630 80.7 3.4e-63 238.8
Cmo05g00293 CST 2 122 Primary Pumps ATPases(2) AT1G75630 96.7 7.4e-50 194.5
Cmo01g01447 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.0e-74 274.2
Cmo09g00788 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.0e-74 274.2
Cmo12g00375 CST 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 2.3e-73 272.3
Cmo05g00294 . 210 366 Primary Pumps ATPases(2) AT2G16510 100.0 1.1e-70 263.5
Cmo12g00374 . 78 234 Primary Pumps ATPases(2) AT2G16510 100.0 1.1e-70 263.5
Cmo05g00293 CST 3 122 Primary Pumps ATPases(2) AT2G16510 99.2 8.5e-52 200.7
Cmo05g00293 CST 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 4.4e-53 204.5
Cmo01g01447 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 7.5e-53 203.8
Cmo09g00788 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 7.5e-53 203.8
Cmo05g00294 . 208 329 Primary Pumps ATPases(2) AT1G19910 98.4 1.7e-52 202.6
Cmo12g00374 . 76 197 Primary Pumps ATPases(2) AT1G19910 98.4 1.7e-52 202.6
Cmo12g00375 CST 1 122 Primary Pumps ATPases(2) AT1G19910 97.5 6.3e-52 200.7
Cmo01g01544 . 4 180 Primary Pumps ATPases(2) AT2G25610 83.1 1.7e-71 266.5
Cmo12g00266 . 4 180 Primary Pumps ATPases(2) AT2G25610 84.2 6.6e-71 264.6
Cmo05g00421 . 10 180 Primary Pumps ATPases(2) AT2G25610 86.0 1.2e-69 260.4
Cmo01g01447 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cmo09g00788 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cmo12g00375 CST 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cmo05g00294 . 235 366 Primary Pumps ATPases(2) AT4G38920 100.0 9.6e-57 216.9
Cmo12g00374 . 103 234 Primary Pumps ATPases(2) AT4G38920 100.0 9.6e-57 216.9
Cmo05g00293 CST 28 122 Primary Pumps ATPases(2) AT4G38920 98.9 7.7e-38 154.1
Cmo01g01544 . 8 180 Primary Pumps ATPases(2) AT4G32530 77.3 7.0e-75 277.7
Cmo12g00266 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 9.4e-72 267.3
Cmo05g00421 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 2.7e-71 265.8
Cmo13g00152 . 1 1065 Primary Pumps ATPases(2) AT1G07810 80.6 0.0e+00 1671.0
Cmo01g00604 . 1 1065 Primary Pumps ATPases(2) AT1G07810 80.9 0.0e+00 1664.4
Cmo13g00152 . 1 1065 Primary Pumps ATPases(2) AT1G07670 80.5 0.0e+00 1671.4
Cmo01g00604 . 1 1065 Primary Pumps ATPases(2) AT1G07670 80.6 0.0e+00 1664.0
Cmo12g00543 . 54 1179 Primary Pumps ATPases(2) AT1G10130 72.0 0.0e+00 1525.0
Cmo13g00152 . 22 1046 Primary Pumps ATPases(2) AT4G00900 66.1 0.0e+00 1328.2
Cmo01g00604 . 22 1045 Primary Pumps ATPases(2) AT4G00900 65.5 0.0e+00 1314.7
Cmo04g02105 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cmo10g01202 . 28 153 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cmo11g01753 CST 3 488 Primary Pumps ATPases(2) AT1G76030 96.1 1.9e-269 925.2
Cmo19g00765 CST 3 488 Primary Pumps ATPases(2) AT1G76030 95.9 1.6e-268 922.2
Cmo06g00370 CST 2 109 Primary Pumps ATPases(2) AT3G01390 79.6 4.0e-37 151.4
Cmo14g00199 CST 2 109 Primary Pumps ATPases(2) AT3G01390 78.7 5.2e-37 151.0
Cmo15g00811 . 40 415 Primary Pumps ATPases(2) AT1G12840 83.0 1.3e-180 629.8
Cmo04g02353 . 1 348 Primary Pumps ATPases(2) AT1G12840 76.3 3.3e-160 562.0
Cmo11g02028 . 591 851 Primary Pumps ATPases(2) AT3G58730 80.8 2.2e-115 412.5
Cmo02g00588 . 1 261 Primary Pumps ATPases(2) AT3G58730 80.1 3.8e-115 411.8
Cmo07g00843 . 3 454 Primary Pumps ATPases(2) AT3G42050 78.8 7.2e-207 717.2
Cmo14g00507 . 3 505 Primary Pumps ATPases(2) AT3G42050 71.6 4.7e-198 688.0
Cmo01g01447 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.0e-74 274.2
Cmo09g00788 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.0e-74 274.2
Cmo12g00375 CST 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 2.3e-73 272.3
Cmo05g00294 . 210 366 Primary Pumps ATPases(2) AT2G16510 100.0 1.1e-70 263.5
Cmo12g00374 . 78 234 Primary Pumps ATPases(2) AT2G16510 100.0 1.1e-70 263.5
Cmo05g00293 CST 3 122 Primary Pumps ATPases(2) AT2G16510 99.2 8.5e-52 200.7
Cmo11g01753 CST 1 488 Primary Pumps ATPases(2) AT4G38510 95.7 1.1e-269 926.0
Cmo19g00765 CST 1 488 Primary Pumps ATPases(2) AT4G38510 95.5 4.3e-269 924.1
Cmo14g00761 . 1 183 Primary Pumps ATPases(2) AT1G64200 75.3 2.2e-67 252.7
Cmo11g01588 . 1 184 Primary Pumps ATPases(2) AT1G64200 73.3 7.1e-66 247.7
Cmo11g01753 CST 3 488 Primary Pumps ATPases(2) AT1G20260 95.3 3.1e-267 917.9
Cmo19g00765 CST 3 488 Primary Pumps ATPases(2) AT1G20260 95.1 2.6e-266 914.8
Cmo02g00864 CST 1 811 Primary Pumps ATPases(2) AT2G28520 80.0 0.0e+00 1315.8
Cmo20g00495 CST 1 735 Primary Pumps ATPases(2) AT2G28520 72.8 0.0e+00 1141.7
Cmo19g00696 . 833 1616 Primary Pumps ATPases(2) AT2G28520 55.2 1.2e-244 843.6
Cmo11g01111 . 10 418 Primary Pumps ATPases(2) AT2G28520 52.6 8.6e-121 432.2
Cmo11g01055 . 1 353 Primary Pumps ATPases(2) AT3G28715 81.1 9.1e-165 577.0
Cmo14g00761 . 1 229 Primary Pumps ATPases(2) AT4G11150 78.3 3.1e-92 335.5
Cmo11g01588 . 1 211 Primary Pumps ATPases(2) AT4G11150 74.1 1.6e-80 296.6
Cmo17g00614 . 1 623 Primary Pumps ATPases(2) AT1G78900 93.9 0.0e+00 1180.6
Cmo08g00822 . 1 623 Primary Pumps ATPases(2) AT1G78900 93.1 0.0e+00 1171.0
Cmo11g01753 CST 3 488 Primary Pumps ATPases(2) AT1G76030 96.1 1.9e-269 925.2
Cmo19g00765 CST 3 488 Primary Pumps ATPases(2) AT1G76030 95.9 1.6e-268 922.2
Cmo11g01753 CST 1 488 Primary Pumps ATPases(2) AT4G38510 95.7 1.1e-269 926.0
Cmo19g00765 CST 1 488 Primary Pumps ATPases(2) AT4G38510 95.5 4.3e-269 924.1
Cmo11g01753 CST 3 488 Primary Pumps ATPases(2) AT1G20260 95.3 3.1e-267 917.9
Cmo19g00765 CST 3 488 Primary Pumps ATPases(2) AT1G20260 95.1 2.6e-266 914.8
Cmo15g00811 . 40 415 Primary Pumps ATPases(2) AT1G12840 83.0 1.3e-180 629.8
Cmo04g02353 . 1 348 Primary Pumps ATPases(2) AT1G12840 76.3 3.3e-160 562.0
Cmo11g02028 . 591 851 Primary Pumps ATPases(2) AT3G58730 80.8 2.2e-115 412.5
Cmo02g00588 . 1 261 Primary Pumps ATPases(2) AT3G58730 80.1 3.8e-115 411.8
Cmo14g00761 . 1 229 Primary Pumps ATPases(2) AT4G11150 78.3 3.1e-92 335.5
Cmo11g01588 . 1 211 Primary Pumps ATPases(2) AT4G11150 74.1 1.6e-80 296.6
Cmo14g00761 . 1 223 Primary Pumps ATPases(2) AT3G08560 69.5 3.2e-76 282.3
Cmo11g01588 . 1 211 Primary Pumps ATPases(2) AT3G08560 66.2 2.6e-70 262.7
Cmo14g00761 . 1 183 Primary Pumps ATPases(2) AT1G64200 75.3 2.2e-67 252.7
Cmo11g01588 . 1 184 Primary Pumps ATPases(2) AT1G64200 73.3 7.1e-66 247.7
Cmo04g02105 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cmo10g01202 . 28 153 Primary Pumps ATPases(2) AT4G02620 84.1 2.3e-57 218.8
Cmo06g00370 CST 2 109 Primary Pumps ATPases(2) AT3G01390 79.6 4.0e-37 151.4
Cmo14g00199 CST 2 109 Primary Pumps ATPases(2) AT3G01390 78.7 5.2e-37 151.0
Cmo07g00843 . 3 454 Primary Pumps ATPases(2) AT3G42050 78.8 7.2e-207 717.2
Cmo14g00507 . 3 505 Primary Pumps ATPases(2) AT3G42050 71.6 4.7e-198 688.0
Cmo02g00864 CST 1 811 Primary Pumps ATPases(2) AT2G28520 80.0 0.0e+00 1315.8
Cmo20g00495 CST 1 735 Primary Pumps ATPases(2) AT2G28520 72.8 0.0e+00 1141.7
Cmo19g00696 . 833 1616 Primary Pumps ATPases(2) AT2G28520 55.2 1.2e-244 843.6
Cmo11g01111 . 10 418 Primary Pumps ATPases(2) AT2G28520 52.6 8.6e-121 432.2
Cmo19g00696 . 829 1621 Primary Pumps ATPases(2) AT2G21410 65.8 9.3e-309 1056.6
Cmo02g00864 CST 9 816 Primary Pumps ATPases(2) AT2G21410 62.3 6.3e-297 1017.3
Cmo20g00495 CST 9 749 Primary Pumps ATPases(2) AT2G21410 56.6 7.5e-258 887.5
Cmo12g00383 CST 1 693 Primary Pumps ATPases(2) AT2G21410 57.1 5.9e-247 851.3
Cmo11g01111 . 6 418 Primary Pumps ATPases(2) AT2G21410 69.1 4.4e-165 579.3
Cmo19g00696 . 831 1621 Primary Pumps ATPases(2) AT4G39080 66.4 2.7e-308 1055.0
Cmo02g00864 CST 9 816 Primary Pumps ATPases(2) AT4G39080 63.5 2.2e-297 1018.8
Cmo20g00495 CST 9 735 Primary Pumps ATPases(2) AT4G39080 58.3 3.4e-258 888.6
Cmo12g00383 CST 1 693 Primary Pumps ATPases(2) AT4G39080 57.2 9.5e-245 844.0
Cmo11g01111 . 8 418 Primary Pumps ATPases(2) AT4G39080 70.4 1.1e-165 581.3
Cmo01g01447 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cmo09g00788 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cmo12g00375 CST 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.9e-60 229.2
Cmo05g00294 . 235 366 Primary Pumps ATPases(2) AT4G34720 100.0 3.4e-57 218.4
Cmo12g00374 . 103 234 Primary Pumps ATPases(2) AT4G34720 100.0 3.4e-57 218.4
Cmo05g00293 CST 28 122 Primary Pumps ATPases(2) AT4G34720 98.9 2.7e-38 155.6
Cmo05g00293 CST 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 4.4e-53 204.5
Cmo01g01447 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 7.5e-53 203.8
Cmo09g00788 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 7.5e-53 203.8
Cmo05g00294 . 208 329 Primary Pumps ATPases(2) AT1G19910 98.4 1.7e-52 202.6
Cmo12g00374 . 76 197 Primary Pumps ATPases(2) AT1G19910 98.4 1.7e-52 202.6
Cmo12g00375 CST 1 122 Primary Pumps ATPases(2) AT1G19910 97.5 6.3e-52 200.7
Cmo01g01447 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cmo09g00788 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cmo12g00375 CST 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 5.4e-60 227.6
Cmo05g00294 . 235 366 Primary Pumps ATPases(2) AT4G38920 100.0 9.6e-57 216.9
Cmo12g00374 . 103 234 Primary Pumps ATPases(2) AT4G38920 100.0 9.6e-57 216.9
Cmo05g00293 CST 28 122 Primary Pumps ATPases(2) AT4G38920 98.9 7.7e-38 154.1
Cmo12g00375 CST 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 1.1e-66 250.4
Cmo01g01447 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.3 4.3e-66 248.4
Cmo09g00788 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.3 4.3e-66 248.4
Cmo05g00294 . 209 366 Primary Pumps ATPases(2) AT1G75630 80.7 3.4e-63 238.8
Cmo12g00374 . 77 234 Primary Pumps ATPases(2) AT1G75630 80.7 3.4e-63 238.8
Cmo05g00293 CST 2 122 Primary Pumps ATPases(2) AT1G75630 96.7 7.4e-50 194.5
Cmo01g01447 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.0e-74 274.2
Cmo09g00788 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.0e-74 274.2
Cmo12g00375 CST 3 165 Primary Pumps ATPases(2) AT2G16510 98.8 2.3e-73 272.3
Cmo05g00294 . 210 366 Primary Pumps ATPases(2) AT2G16510 100.0 1.1e-70 263.5
Cmo12g00374 . 78 234 Primary Pumps ATPases(2) AT2G16510 100.0 1.1e-70 263.5
Cmo05g00293 CST 3 122 Primary Pumps ATPases(2) AT2G16510 99.2 8.5e-52 200.7
Cmo01g01544 . 8 180 Primary Pumps ATPases(2) AT4G32530 77.3 7.0e-75 277.7
Cmo12g00266 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 9.4e-72 267.3
Cmo05g00421 . 1 180 Primary Pumps ATPases(2) AT4G32530 72.9 2.7e-71 265.8
Cmo01g01544 . 4 180 Primary Pumps ATPases(2) AT2G25610 83.1 1.7e-71 266.5
Cmo12g00266 . 4 180 Primary Pumps ATPases(2) AT2G25610 84.2 6.6e-71 264.6
Cmo05g00421 . 10 180 Primary Pumps ATPases(2) AT2G25610 86.0 1.2e-69 260.4
Cmo11g01055 . 1 353 Primary Pumps ATPases(2) AT3G28710 83.3 7.8e-172 600.5
Cmo11g01055 . 1 353 Primary Pumps ATPases(2) AT3G28715 81.1 9.1e-165 577.0
Cmo13g00152 . 1 1065 Primary Pumps ATPases(2) AT1G07810 80.6 0.0e+00 1671.0
Cmo01g00604 . 1 1065 Primary Pumps ATPases(2) AT1G07810 80.9 0.0e+00 1664.4
Cmo13g00152 . 22 1046 Primary Pumps ATPases(2) AT4G00900 66.1 0.0e+00 1328.2
Cmo01g00604 . 22 1045 Primary Pumps ATPases(2) AT4G00900 65.5 0.0e+00 1314.7
Cmo12g00543 . 54 1179 Primary Pumps ATPases(2) AT1G10130 72.0 0.0e+00 1525.0
Cmo13g00152 . 1 1065 Primary Pumps ATPases(2) AT1G07670 80.5 0.0e+00 1671.4
Cmo01g00604 . 1 1065 Primary Pumps ATPases(2) AT1G07670 80.6 0.0e+00 1664.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000455 4 5 5 3 4 3 5 3 3 3 3 3 6 3 3 5 3 6 6 3 3 3 3 3 3 3 3 7 4 4 115
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo20g00495 Cmo_Chr20 FPKM 7.011909 6.982843 2.895288 3.809618 1.742037 1.600029 1.375122 1.634286 1.712129 1.865378