Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00511 ATGGCCGGAGGTGGCGCCGGAAGGTCCTTGGAAGAGACGCCGACGTGGGCCGTCGCCGTCGTTTGTTTCGTTCTGGTTCTGATTTCCATAATCATCGAACACATTCTCCATCTCATCGGAAAGTGGCTTAAGAAGAAGCACAAACGAGCTCTTTACGAAGCTCTGGAGAAGATCAAATCTGAGCTGATGCTGCTGGGGTTCATTTCTCTGCTCCTAACGGTCGGACAGAGCTTAATCACTAATGTTTGTATACCCCCAGAAGTCGCCGCCACGTGGCATCCATGCAGCCCTAAAAAAGAGCTGGAGTTAACCCAAGCTCATGACTCAATCGACTCCGACAATAGTCGCCGGAAACTTCTCGCCATGTCCCCTGTTAATGCCACTTTCCGCCGTGTCCTCGCCGCGGCCGGTGGATCCGACAAATGTGCTGAGAGGGGGAAAGTTCCGTTCGTGTCGGAAGGAGGAATCCATCAGCTGCATATATTCATCTTCGTATTGGCCGTTTTCCATGTTCTGTACTGTGTCTTAACTTTAGCTTTGGGTAATGCTAAGATGAGGAGCTGGAAGTCGTGGGAAAACGAAACGAGAACGGTCGAGTACCAATTTTCACATGATCCAGAACGATTCCGTTTTGCAAGAGACACGTCGTTCGGGCGAAGACATTTAAGTTTCTGGACCAAATCGCCCTTCCTCATGTGGATTGTTTGTTTCTTCCGACAATTTGTTCGGTCTGTTCCTAAGGTTGATTACTTGACTTTAAGACATGGTTTTGTCATGGCACACCTGGCACCGCACAGCGATCAGAAATTTGACTTTAGGAAATACATAAAGCGATCGCTGGAAGAAGATTTCAAGGTGGTTGTCAGTATCAGCCCACCCATCTGGTTCTTCGCTGTCCTCTTCCTGCTTTTCAATACCCACGGGTGGAGGGCTTATCTATGGCTGCCATTTGTGCCATTAATTATTGTGTTATTGGTGGGGACTAAGTTGCAAGTGATAATTACGAAAATGGGCCTGAGGATTCAGGAACGAGGGGAGGTGGTGAAGGGAGTGCCGGTGGTCGAACCGGGGGACGACCTGTTTTGGTTCAACCGGCCCCGGCTCATTCTTTATCTCATCAATTTTGTGCTCTTTCAGAATGCCTTTCAGCTTGCTTTCTTTGCTTGGACTTGGAAAGAATTCGGGATGAAATCTTGTTTTCACGAGCATATCGAGGATTTGGTGATCAGAATAACGATGGGAGTCCTCGTTCAAATCCTATGCAGTTATGTCACGTTGCCTCTTTATGCGCTAGTCACACAGATGGGTTCGACGATGAAGCCGACGATTTTCAACGATAGAGTAGCGACAGCGTTGAGAAACTGGCACCACACGGCTCGCAAACACATCAAGCAAAATCGGGGGTCGATGACGCCGATGTCGAGCCGCCCTGCTACACCCTCCCACCACATGTCACCAGTGCACCTTCTCCGCCACTATCGAAGCGAATTGGACAGTTTCCATACCTCTCCTAGAAGATCAAATTTCGACAACGACCAATGGGATCCAGACTCTCCTTCGCCATCGCACCATTTCCACCATCGTCCTCTCGATGTCGAAGGCTCCAGTTCCCACAAACACCACTTCCATCGCAACATGGAGGTCGGCGAAGCCGATGTTGACAGGGATTCACCCCAAATCGACTCGACGACCCAGACTCCAAATTCGAATGCGAATAATAACGGTGAGCAGCACGAGATTGACGTGGGCCCGAAGGAATTCTCGTTCGATAGAAGAGTCGATGGAGTATGA 1791 49.53 MAGGGAGRSLEETPTWAVAVVCFVLVLISIIIEHILHLIGKWLKKKHKRALYEALEKIKSELMLLGFISLLLTVGQSLITNVCIPPEVAATWHPCSPKKELELTQAHDSIDSDNSRRKLLAMSPVNATFRRVLAAAGGSDKCAERGKVPFVSEGGIHQLHIFIFVLAVFHVLYCVLTLALGNAKMRSWKSWENETRTVEYQFSHDPERFRFARDTSFGRRHLSFWTKSPFLMWIVCFFRQFVRSVPKVDYLTLRHGFVMAHLAPHSDQKFDFRKYIKRSLEEDFKVVVSISPPIWFFAVLFLLFNTHGWRAYLWLPFVPLIIVLLVGTKLQVIITKMGLRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQLAFFAWTWKEFGMKSCFHEHIEDLVIRITMGVLVQILCSYVTLPLYALVTQMGSTMKPTIFNDRVATALRNWHHTARKHIKQNRGSMTPMSSRPATPSHHMSPVHLLRHYRSELDSFHTSPRRSNFDNDQWDPDSPSPSHHFHHRPLDVEGSSSHKHHFHRNMEVGEADVDRDSPQIDSTTQTPNSNANNNGEQHEIDVGPKEFSFDRRVDGV 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 2450421 2453385 + CmoCh20G005110.1 Cmo20g00511 404828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00511 596 PANTHER MLO-LIKE PROTEIN 1 536 - -
Cmo20g00511 596 MobiDBLite consensus disorder prediction 558 577 - -
Cmo20g00511 596 MobiDBLite consensus disorder prediction 500 596 - -
Cmo20g00511 596 MobiDBLite consensus disorder prediction 579 596 - -
Cmo20g00511 596 MobiDBLite consensus disorder prediction 500 557 - -
Cmo20g00511 596 Pfam Mlo family 8 493 IPR004326 GO:0006952|GO:0016021
Cmo20g00511 596 PANTHER MLO-LIKE PROTEIN 1 1 536 IPR004326 GO:0006952|GO:0016021
Cmo20g00511 596 MobiDBLite consensus disorder prediction 460 484 - -
Cmo20g00511 596 MobiDBLite consensus disorder prediction 465 481 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo13g00190 Cmo20g00511 CCT
Cmo13g00190 Cmo20g00511 ECH
Cmo02g00883 Cmo20g00511 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00200 Cmo-Chr2:936002 Cmo20g00511 Cmo-Chr20:2450421 3.56E-13 dispersed
Cmo03g00647 Cmo-Chr3:5880248 Cmo20g00511 Cmo-Chr20:2450421 4.44E-179 dispersed
Cmo04g01433 Cmo-Chr4:7310252 Cmo20g00511 Cmo-Chr20:2450421 0 dispersed
Cmo07g00374 Cmo-Chr7:1715847 Cmo20g00511 Cmo-Chr20:2450421 5.21E-176 dispersed
Cmo18g00890 Cmo-Chr18:10160316 Cmo20g00511 Cmo-Chr20:2450421 0 dispersed
Cmo01g00568 Cmo-Chr1:2853633 Cmo20g00511 Cmo-Chr20:2450421 8.99E-159 wgd
Cmo13g00188 Cmo-Chr13:1302615 Cmo20g00511 Cmo-Chr20:2450421 0 wgd
Cmo02g00883 Cmo-Chr2:5467485 Cmo20g00511 Cmo-Chr20:2450421 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00511 K08472 - csv:101212018 1023.85