Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo20g00606 | ATGGACGACTCTGCAGGAAACTGGAATTGGCTCTTCGATTACTCTACAATGGAGGATCTCCCCGTCGTCGGCGCCCACTTCTCGCCGCCGCAGTCCGTCAGTTTCTCCTGGTCCAATCCCTCCATCAACTTTCCTTCTAATAAACACAGCCTTGAGGTAGACTGCTCATATGAAGATCTGGACAGCTTAAAGGAAGTAGGTCGGAAACGTCTAAAGGCTGAAACAAGTTCTGCATCTACCTCCAAAGCCTGCAGAGAGAAACTGAGGAGAGATAAGCTGAATGAGAGGTTCTTGGAATTATCTGCTGTCCTGGAACCTGGAAAACTACCCAAAACAGACAAGGTTGTCATCTTGAGTGATGCTATCAGAATGGTGACTGATTTACAATGTGAAATCGAGAAGCTGAAAGAATCAGAGGATGATTTGAAGGAAAAAATCAAAGAATTAAAGGTTGAGAAAAATGAACTTCGTGATGAGAAGCAAAGATTGAGAGCAGAGAAAGAAAAATTGGAGCTGCAAATCAAAGCAGTGAATGCTCGAGCAGCAGCTGATATCCAACATCCTCCCCCTACGTTGTCAGCTGCTTTTACAGCACAAGGGCAAGCTGCTGGTAACAAGTTGATGCCTTTCATTGGTTATCCCGGCATTGCCATGTGGCAATTCTTGCCGCCTGCAACCGTCGACACGTCTCAGGATCATGTTCTCCGCCCACCAGTTGCTTAA | 723 | 46.2 | MDDSAGNWNWLFDYSTMEDLPVVGAHFSPPQSVSFSWSNPSINFPSNKHSLEVDCSYEDLDSLKEVGRKRLKAETSSASTSKACREKLRRDKLNERFLELSAVLEPGKLPKTDKVVILSDAIRMVTDLQCEIEKLKESEDDLKEKIKELKVEKNELRDEKQRLRAEKEKLELQIKAVNARAAADIQHPPPTLSAAFTAQGQAAGNKLMPFIGYPGIAMWQFLPPATVDTSQDHVLRPPVA | 240 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 2970707 | 2977931 | + | CmoCh20G006060.1 | Cmo20g00606 | 404923 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo20g00606 | 240 | Coils | Coil | 118 | 180 | - | - | |
Cmo20g00606 | 240 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 77 | 128 | IPR011598 | GO:0046983 | |
Cmo20g00606 | 240 | Pfam | Helix-loop-helix DNA-binding domain | 80 | 129 | IPR011598 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo02g00151 | Cmo20g00606 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo10g00202 | Cmo-Chr10:905295 | Cmo20g00606 | Cmo-Chr20:2970707 | 1.59E-15 | dispersed | |
Cmo16g00916 | Cmo-Chr16:5522341 | Cmo20g00606 | Cmo-Chr20:2970707 | 2.71E-98 | dispersed | |
Cmo18g00301 | Cmo-Chr18:1954504 | Cmo20g00606 | Cmo-Chr20:2970707 | 1.54E-35 | dispersed | |
Cmo02g00151 | Cmo-Chr2:740367 | Cmo20g00606 | Cmo-Chr20:2970707 | 2.87E-138 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
11741 | PF00010 | HLH | 2.90E-08 | No_clan | Cmo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo20g00606 | - | - | cmos:111449017 | 436.802 |