Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00612 ATGAGAATGGGGAGGCTTACTTCTTTGGTGTTGGCCGCTATTGTTGGTCTTCTAGGCCTCATAGGCTCCACTCAAGCTCAGTTACAGCTTGGTTTCTATGCCAAAAGCTGCCCAAACGCTGAGAAGATTGTGCTGGATTTCGTTCATCAGCATATCCATAATGCCCCTTCATTGGCAGCAACTTTCATAAGAATGCACTTCCATGATTGCTTTGTTAGGGGTTGTGATGGGTCTGTGCTTATAAACTCCACTTCAAATAACCAAGCTGAGAAGGATTCTCCTCCAAATCTAACACTTAGAGGGTTTGACTTCATTGATAGAGTTAAAAGCTTACTTGAAGCTGAATGCCCTGGAGTGGTGGACGGAGTAATCTCAAGATCATCAGAAGCCCTGGCTAACATTCCTCCTCCTTTCGGAAACCTTTCAACACTCCAAAGACTGTTCGAAGATCAAGGCCTTGATCTGAAAGACTTGGTATTACTATCTGGCGCTCACACAATCGGTATAGCGCACTGCTCATCATTCAGAAACCGATTGTACAATTTCACCGGCGTGGGAGACCAAGATCCCTCTCTGGACCCAAGATACGCCGCTAACCTGAAGGCCAACAAATGCAAAACTCCGACCGACAACAGCAAGGTGGAGATGGACCCTGGAAGCCGCAACACTTTCGATCTTAGCTACTACTCTCTTCTTCTCAAGAGAAGGGGCCTTTTCGAATCCGATTCTGCTCTCACTAAAGGCGCAACGACCTTGAGTCTAGTTCAGAAACTTGTTCAAGGACCCATTGAAGAGTTCTTCTCTGAATTTGCAGCATCCATTGAGAAAATGGGACGGATTAAAGTGAAGACTGGAACTGAGGGTGAAATCAGAAGGAGATGCGCCGTCGTGAATGGTTGA 900 46.22 MRMGRLTSLVLAAIVGLLGLIGSTQAQLQLGFYAKSCPNAEKIVLDFVHQHIHNAPSLAATFIRMHFHDCFVRGCDGSVLINSTSNNQAEKDSPPNLTLRGFDFIDRVKSLLEAECPGVVDGVISRSSEALANIPPPFGNLSTLQRLFEDQGLDLKDLVLLSGAHTIGIAHCSSFRNRLYNFTGVGDQDPSLDPRYAANLKANKCKTPTDNSKVEMDPGSRNTFDLSYYSLLLKRRGLFESDSALTKGATTLSLVQKLVQGPIEEFFSEFAASIEKMGRIKVKTGTEGEIRRRCAVVNG 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3001453 3003081 - CmoCh20G006120.1 Cmo20g00612 404929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00612 299 SUPERFAMILY Heme-dependent peroxidases 27 298 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo20g00612 299 Gene3D Peroxidase, domain 2 135 277 - -
Cmo20g00612 299 Gene3D - 123 298 - -
Cmo20g00612 299 Gene3D - 28 122 - -
Cmo20g00612 299 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g00612 299 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g00612 299 PRINTS Plant peroxidase signature 231 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g00612 299 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g00612 299 PRINTS Plant peroxidase signature 215 230 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g00612 299 PRINTS Plant peroxidase signature 272 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g00612 299 ProSiteProfiles Plant heme peroxidase family profile. 27 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo20g00612 299 CDD secretory_peroxidase 27 297 IPR033905 GO:0004601|GO:0042744
Cmo20g00612 299 PANTHER PEROXIDASE 25-RELATED 14 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g00612 299 PANTHER PEROXIDASE 25-RELATED 121 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g00612 299 PRINTS Haem peroxidase superfamily signature 157 172 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo20g00612 299 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo20g00612 299 PRINTS Haem peroxidase superfamily signature 217 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo20g00612 299 ProSitePatterns Peroxidases proximal heme-ligand signature. 157 167 IPR019793 -
Cmo20g00612 299 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Cmo20g00612 299 PANTHER PEROXIDASE 14 120 - -
Cmo20g00612 299 PANTHER PEROXIDASE 121 298 - -
Cmo20g00612 299 Pfam Peroxidase 120 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00159 Cmo20g00612 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo20g00612 Cmo-Chr20:3001453 Cmo18g01236 Cmo-Chr18:12206483 4.89E-75 dispersed
Cmo11g01911 Cmo-Chr11:13273050 Cmo20g00612 Cmo-Chr20:3001453 2.57E-100 wgd
Cmo02g00159 Cmo-Chr2:771614 Cmo20g00612 Cmo-Chr20:3001453 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00612 K00430 - csv:101213629 513.842