Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00652 ATGCCGAAGGGTTTGAAGAGTAAATGTCATTCTACGTCTCATCAGCTTTTGAAGGAAAAAGCAAAGAACCGTGTTAATGATCTTCAAGGGATATTCACTAATCTTCAAAATGCACGAAAGGAGAGTCGTACTACTGATATTGCTGTCTTGGAGGAGCAAGTCCATCAAATGCTTAGGGAGTGGAATGCTGAGCTTAATGAACCCTCACCTTCCTCTTCATTTGTTGAGGGTAGTCTTGGATCGTTCTCGCAAGAACTAGCCCGTCTTCTTGAGCATTGTGATGAGCAAGATGATGCAACTAGTACAATGGCTGAACCAAAGACTGAGCCTGAACTACATTGCGTTCTTGCCAGCAAACCGTCAAATTTTGTTCAGGATAGTTTTGGTTTTCCGGAGCTCCAACAGTATAGTTTTCTAGGATTTGAAGAGTGCCAAGTCTCTTCTCCAGTTCTACAGAATTATTCATTTTACAAATCTGACATGGCTACTCAGCCTAATTGTCAAAGTTTCGAAGTAGATAAAAACTTTGAGCAGAACACGATAGTCAGTAAGGATGATGTGTCTACTTTGGATTGCCATGCATTGAATTCACATCAAGAATTCGACTATGGGGTTCTTGTTGGGCCATATGATGCGGGAGACTTTAGTCAGGACACAAAGTCCGGTATTCTCCCAACTATCTCACCCGCACCGTCTGCTTTTATGGGCCCGATATGTGCTCTCTGGGATTGTTTCAGACCTGCTCAAGGATCCAAATGGTGCCTGGACTATTGCAGTAGTTGTCATTCTGTTCTTGCAATGAATGAAGGCCTTCCAGGAATGACTCCAATATTGCGCCCTGGAGGCATTGGCTTAAAGGATGGTCCATTGTTTGCTGCTCTTCGTGCAAAGACACGGACCAAAGAAGTTGGAATACCTATATGTGATGGTGCTGCAACAAGGAAATCCCCATGGAATGCTCCTGAGCTTTTTGATATTTCGTTTCTTGAGGGGGAGACAATCAGGGAATGGCTCTACTTCGACAAGCCTAGACGGGCCTTTGAGAGTGGCAATCGAAAGCAAAGGTCATTGCCAGATTATAATGGGCGTGGTTGGCATGAATCAAGGAAGCAGGTGATGAAGGAGTTCGGTGGTCAGAAGAAGTCTTATTACATGGATCCACAGCCATCAAGCTCTCTTGAATGGCATTTGTACGAATACGATATCACAGATTATGATTCATTCGCATTATATAGGCTGGAACTCAAGCATGCTGATGCAAAGAAGAGTCCAAAGGGAAAACTGACAGCTGATCCTCTGGCTGATCTGCAGAAGAAGATGGGAAGGCTTACTGCAGAGGGGCCTGTTGAGCTTGGACAACTTATTAAAGCTAAGAGTACGAGTACGACAATGGCGAATAATAAGGCTGATAATGTAAGTATCAATCTTTCTCCACATAATCAGAATATGTCTAACACTAACTGA 1464 43.51 MPKGLKSKCHSTSHQLLKEKAKNRVNDLQGIFTNLQNARKESRTTDIAVLEEQVHQMLREWNAELNEPSPSSSFVEGSLGSFSQELARLLEHCDEQDDATSTMAEPKTEPELHCVLASKPSNFVQDSFGFPELQQYSFLGFEECQVSSPVLQNYSFYKSDMATQPNCQSFEVDKNFEQNTIVSKDDVSTLDCHALNSHQEFDYGVLVGPYDAGDFSQDTKSGILPTISPAPSAFMGPICALWDCFRPAQGSKWCLDYCSSCHSVLAMNEGLPGMTPILRPGGIGLKDGPLFAALRAKTRTKEVGIPICDGAATRKSPWNAPELFDISFLEGETIREWLYFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKEFGGQKKSYYMDPQPSSSLEWHLYEYDITDYDSFALYRLELKHADAKKSPKGKLTADPLADLQKKMGRLTAEGPVELGQLIKAKSTSTTMANNKADNVSINLSPHNQNMSNTN 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3187678 3190850 - CmoCh20G006520.1 Cmo20g00652 404969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00652 487 PANTHER TRANSCRIPTION FACTOR VOZ1 1 463 IPR039277 GO:0006355|GO:0048578
Cmo20g00652 487 PANTHER TRANSCRIPTION FACTOR VOZ2 1 463 - -
Cmo20g00652 487 Coils Coil 18 38 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo02g00199 Cmo20g00652 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00212 Cmo-Chr7:1063694 Cmo20g00652 Cmo-Chr20:3187678 1.50E-175 dispersed
Cmo02g00199 Cmo-Chr2:932111 Cmo20g00652 Cmo-Chr20:3187678 0 wgd
Cmo20g00652 Cmo-Chr20:3187678 Cmo03g01297 Cmo-Chr3:9786940 9.25E-176 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11748 None None None None Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00652 - - csv:101211467 837.41