Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo20g00670 | ATGTCCTGCCGCCTCGACCCGACGCAAGAAAAACCAACTGAACGGAACAGAGAGAGAGAGAGAGTTCTTTTTTTCTCGCTCCGTTTCTTCGGAGATTTTCTGTCCGGCATCACCACCAAGATGCCAGATGAAAATTCAATTCCATTTGATCGAGATGCAGAGCCTTTTGTTGAGGTCGATCCAACTGGAAGGTTTGGACGATACAATGATCTTCTTGGGTCTGGAGCAGTGAAGAAAGTTTATAGGGCATTTGATCAGGAGGAAGGAATTGAGGTTGCTTGGAATCAGGTTCGATTGAGAAATTTTAGTGGGGATCCAATGTTCATTAACCGCTTGAGGTCTGAGGTTCAGCTGCTGAGCACGTTAAACAACAAATATATAATTGTTTGTTACAGTGTTTGGAATGATGATGAGCATAAGACGTTGAATTTCATTACCGAGGTGTGCACATCAGGAAATCTGAGGGAATATCGTAAGAAACATCGACATGTGTCAATTAAGGCCTTGAAGAAGTGGTCAAAACAGGTACTCGAGGGATTGGATTATCTTCATACTCACGAACCTTGCATTATTCACAGGGACCTCAACTGCAGTAACATATTTGTCAATGGTAACATTGGGCAGGTTAAAATAGGCGATCTAGGTCTTGCAGCTATAGTTGGCAGGAGTCATGCTGCACATTCGATCATAGGCACACCAGAGTATATGGCACCAGAGCTGTATGAAGAAGACTACACAGAGATGGTGGATATATACTCCTTTGCGATGTGTTTGCTCGAGATGGTTACAATGGAGATACCATACAGTGAATGTGATAGTGTTGCGAAAATATTCAGGAAGGTGACAACTGGAATAAAACCCCAAGCATTAGACAAAGTGACTAATGATGAAGTCAGGGCTTTCATTGAGAAGTGCATTGCACAACCAAGAGCAAGACCTTCCGCTTCCGAACTTCTCAAGGATCCCTTCTTTGACGAAGTTGGGGATGAAGATTCTGAGCAGTCTTAA | 1008 | 43.15 | MSCRLDPTQEKPTERNRERERVLFFSLRFFGDFLSGITTKMPDENSIPFDRDAEPFVEVDPTGRFGRYNDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLRNFSGDPMFINRLRSEVQLLSTLNNKYIIVCYSVWNDDEHKTLNFITEVCTSGNLREYRKKHRHVSIKALKKWSKQVLEGLDYLHTHEPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFAMCLLEMVTMEIPYSECDSVAKIFRKVTTGIKPQALDKVTNDEVRAFIEKCIAQPRARPSASELLKDPFFDEVGDEDSEQS | 335 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 3271666 | 3276185 | - | CmoCh20G006700.1 | Cmo20g00670 | 404987 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo20g00670 | 335 | Gene3D | Phosphorylase Kinase; domain 1 | 50 | 147 | - | - | |
Cmo20g00670 | 335 | MobiDBLite | consensus disorder prediction | 311 | 335 | - | - | |
Cmo20g00670 | 335 | Gene3D | Transferase(Phosphotransferase) domain 1 | 149 | 329 | - | - | |
Cmo20g00670 | 335 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 41 | 327 | - | - | |
Cmo20g00670 | 335 | CDD | STKc_WNK | 64 | 324 | - | - | |
Cmo20g00670 | 335 | SUPERFAMILY | Protein kinase-like (PK-like) | 59 | 325 | IPR011009 | - | |
Cmo20g00670 | 335 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED | 41 | 327 | - | - | |
Cmo20g00670 | 335 | Pfam | Protein kinase domain | 70 | 324 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo20g00670 | 335 | ProSiteProfiles | Protein kinase domain profile. | 66 | 324 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo11g01840 | Cmo20g00670 | CCT | |
Cmo19g00886 | Cmo20g00670 | CCT | |
Cmo19g00886 | Cmo20g00670 | ECH | |
Cmo11g01840 | Cmo20g00670 | ECH | |
Cmo02g00223 | Cmo20g00670 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00880 | Cmo-Chr6:5019086 | Cmo20g00670 | Cmo-Chr20:3271666 | 5.21E-165 | dispersed | |
Cmo16g00981 | Cmo-Chr16:6714689 | Cmo20g00670 | Cmo-Chr20:3271666 | 1.41E-156 | dispersed | |
Cmo20g00670 | Cmo-Chr20:3271666 | Cmo13g00886 | Cmo-Chr13:7991434 | 1.21E-125 | dispersed | |
Cmo02g00223 | Cmo-Chr2:1026703 | Cmo20g00670 | Cmo-Chr20:3271666 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75161 | PF00069 | Pkinase | 8.80E-51 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo20g00670 | K08867 | - | csv:101222153 | 577.015 |