Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00737 ATGTTCTCAGGGTTGATGAACTTTCTGAAAGCTTGTTTTCGACCGCGGTCGGATCGACATGTGCACAAAGGTTCAGATGCTGGTGGTCGACAGGATGGTCTCTTATGGTACAAGGATAGTGGACAGCATGCCAATGGTGAGTTTTCAATGGCTGTAGTTCAGGCTAATAATTTACTTGAGGATCAAAGCCAGATGGAGTCGGGCAATTTGAGCTTGCACGAGGCTGGGCCATATGGTACTTTTGTTGGTGTGTATGATGGGCATGGAGGGCCAGAGACATCTCGCTATGTAAATGATCATCTCTTCCAGCATCTTAAAAGGTTTGCTTCCGAGCAACAGTCCATGTCGGTGGATGTCATACGAAAGGCGTTTCAAGCTACCGAAGACGGGGTTATCGCTCAAGTTTCAAAACAATGGTCAATGAGGCCACTAATTGCAGCTGTTGGATCTTGCTGCCTTGTAGGTGTAATTTGTGGTGGAACTCTTTACATAGCTAACCTTGGTGATTCACGAGCTGTTTTAGGGAGAGTTGTAAAGGCAACAGGGGAAGTTTTGTCTGTCCAGTTGTCGGCTGAGCATAATGCATCAATAGAGTCTGTCAGGCAGGAGCTCCGGGCCCTGCACCCTGATGATCCACATATTGTTGTCTTGAAGCATAATGTATGGCGTGTGAAGGGCCTTATACAGGTTTCTCGATCCATCGGTGATGTCTATTTAAAGAGAGCTGAGTTCAACCGAGAGCCTCTATATGCTAAGTTTCGCCTTCGTGAACCTATCAAAACGCCCATACTGAACGCCGAACCATCCATTTCAGTGCTCCAGTTGCAACCACAAGATCAATTTATTATATTTGCTTCAGATGGGCTCTGGGAACACCTTAGCAATCAGGAAGCTGTTGATATTGTCCAAAACCATCCACGCAATGGAAGTGCAAGGAGGTTAGTGAAAGCAGCACTGCAAGAGGCAGCAAAGAAACGAGAAATGAGGTACTCCGATTTGAAGAAGATTGACCGTGGCGTACGGCGACATTTCCACGATGACATCACAGTGGTTGTTGTGTTTCTCGACTCGAACCTTGTGAGCCGGGCTAGCTCTACAAAATGCCCAAGCCTATCCATGCGAGGGGGCGGAGTTAACTTGCATCCTAACTCATTGGCCCCTGGCATGGCCTGA 1173 47.4 MFSGLMNFLKACFRPRSDRHVHKGSDAGGRQDGLLWYKDSGQHANGEFSMAVVQANNLLEDQSQMESGNLSLHEAGPYGTFVGVYDGHGGPETSRYVNDHLFQHLKRFASEQQSMSVDVIRKAFQATEDGVIAQVSKQWSMRPLIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLSVQLSAEHNASIESVRQELRALHPDDPHIVVLKHNVWRVKGLIQVSRSIGDVYLKRAEFNREPLYAKFRLREPIKTPILNAEPSISVLQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNHPRNGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASSTKCPSLSMRGGGVNLHPNSLAPGMA 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3678588 3681878 - CmoCh20G007370.1 Cmo20g00737 405054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00737 390 PANTHER ALPHABET, ISOFORM E-RELATED 5 384 - -
Cmo20g00737 390 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Cmo20g00737 390 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Cmo20g00737 390 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 384 - -
Cmo20g00737 390 SUPERFAMILY PP2C-like 59 356 IPR036457 -
Cmo20g00737 390 Pfam Protein phosphatase 2C 79 324 IPR001932 -
Cmo20g00737 390 SMART PP2C_4 39 353 IPR001932 -
Cmo20g00737 390 CDD PP2Cc 48 355 IPR001932 -
Cmo20g00737 390 Gene3D - 36 367 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo19g00763 Cmo20g00737 CCT
Cmo11g01752 Cmo20g00737 CCT
Cmo02g00266 Cmo20g00737 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00262 Cmo-Chr4:1306617 Cmo20g00737 Cmo-Chr20:3678588 0 dispersed
Cmo04g01302 Cmo-Chr4:6609446 Cmo20g00737 Cmo-Chr20:3678588 0 dispersed
Cmo06g00094 Cmo-Chr6:549666 Cmo20g00737 Cmo-Chr20:3678588 1.18E-152 dispersed
Cmo06g00126 Cmo-Chr6:696809 Cmo20g00737 Cmo-Chr20:3678588 0 dispersed
Cmo08g01248 Cmo-Chr8:7887291 Cmo20g00737 Cmo-Chr20:3678588 9.73E-57 dispersed
Cmo14g00170 Cmo-Chr14:759883 Cmo20g00737 Cmo-Chr20:3678588 0 dispersed
Cmo14g00420 Cmo-Chr14:1997601 Cmo20g00737 Cmo-Chr20:3678588 5.56E-148 dispersed
Cmo17g00362 Cmo-Chr17:2221405 Cmo20g00737 Cmo-Chr20:3678588 8.56E-158 dispersed
Cmo11g01752 Cmo-Chr11:12348584 Cmo20g00737 Cmo-Chr20:3678588 0 wgd
Cmo19g00763 Cmo-Chr19:7736007 Cmo20g00737 Cmo-Chr20:3678588 0 wgd
Cmo02g00266 Cmo-Chr2:1281411 Cmo20g00737 Cmo-Chr20:3678588 0 wgd
Cmo20g00737 Cmo-Chr20:3678588 Cmo03g00683 Cmo-Chr3:6014543 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00737 - K01102 csv:101221640 750.74