Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00758 ATGGGGTCTTTGAAGCTGCCTCCGTCGACGACGGTGCTGAAATGGCTGGGATTTGTCTCCGCCGTGTGGGTTCAGGCCATTTCCGGCAACAATTACACCTTTTCCAACTACTCCGACGTCCTTAAGTCTCTGATGAATCTCACCCAACTTCAGCTCAATAATCTCTCCGTCGCTAAAGACGTCGGTAAAGCCTTTGGCTTACTCGCCGGAATCGCCTGTGATCGTTTCCCCACGTGGGTCATCTTGCTCATTGGATCTCTGGAAGGCCTTCTTGGCTATGGCGCTCAGTGGCTCGTCGTTAGCCAGAGGATTTCTCCTCTTCCTTATTGGCAGATGTGTATCTTCTTGTGTATGGGCGGAAACAGCACGACATGGATGAACACGGCGGTGCTGGTGACCTGTATCAGAAACTTCCGGAAGAATCGCGGCCCTGTTTCCGGCATACTTAAAGGCTACGTTGGTCTCAGCACCGCTATTTTCACCGATCTCTGTACTGCTCTGTTTTCCGACGACCCTTCTTCCTTCCTCGTCATGCTCTCTGTTGTCCCCTTCGCTGTCTGTCTCTTCGCCATGTTCTTCCTCCGCGAAATCCCACCTCCGACAACCGCCGCCAAAGCCGCCGCTGACACCCAGGAGGAATCCAACTTCTTCGCCGTCTTCAACGCTCTAGCCGTCATCGTCGCCGTCTATCTCTTATGCTTCGATTTCATCAAAAACTTCGGCACCGTCGTCTCCCAATTGTTCTCCGCCGGGTTACTAATTCTCCTCGGATCCCCTTTGATCATTCCGATTTACTCGTTTTTCAAGAACTGCCACTCGAATTCAGCCCAATCGGACTTGGAGACTCAAACAGAGGAGCCGCTGTTGAAGGAAGAAGCTACCGTTGCAGCTCCGGTAAAGGAGGAAATTACAGAGGAGGAGCAGAGACAGCCAGTGATCGGAGAAGAACACACGATTATTCAGGCGGTGAAAACCATTGATTTCTGGGTATTGTTCATATCGTTCCTATGTGGAGTTGGGACCGGATTGGCGGTGATGAACAATATGGGTCAGATCGGATTAGCTCTGGGCTACGCCGACGTCTCCATGTTCGTCTCTCTCATAAGCATTTGGGGCTTTTTCGGCCGGATCCTCTCCGGTTCCCTCTCCGAGCATTTCCTCAAGAAATTGGGCACACCAAGGCCCTTATGGAATGCAGCATCTCAAATTCTAATGACAATTGGCTACATCTTGATGGCGATGGCAATGCCAGGGTCTCTCTACATCGGCTCAGTCATAGTCGGGCTCTGTTACGGTGTTCGTCTCTCAATCACCGTCCCAACAGCCTCAGAGCTCTTCGGCCTCAAATACTATGGTCTCATCTACAACATTTTGATCCTTAACCTCCCAATCGGGTCGTTTCTCTTCTCTGGGCTTCTCGCGGGATTCCTCTACGACATGGAGGCGACCCCGACGGAGGGCGGGGGGAACACGTGCATCGGCGGCCATTGCTATAGAATTGTGTTTGTTGTGATGGCGTTGGCTTGTGGGATTGGGTTGGTTTTGGACATTTGGTTGGCATATAGGACCAAGGGGCTTTATTCTAAGCTGAAAGGGAACAAGAGATCAAAGAAGGGAAGCAGCAATAATAGCTCGTTGAGTTGA 1644 51.34 MGSLKLPPSTTVLKWLGFVSAVWVQAISGNNYTFSNYSDVLKSLMNLTQLQLNNLSVAKDVGKAFGLLAGIACDRFPTWVILLIGSLEGLLGYGAQWLVVSQRISPLPYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRKNRGPVSGILKGYVGLSTAIFTDLCTALFSDDPSSFLVMLSVVPFAVCLFAMFFLREIPPPTTAAKAAADTQEESNFFAVFNALAVIVAVYLLCFDFIKNFGTVVSQLFSAGLLILLGSPLIIPIYSFFKNCHSNSAQSDLETQTEEPLLKEEATVAAPVKEEITEEEQRQPVIGEEHTIIQAVKTIDFWVLFISFLCGVGTGLAVMNNMGQIGLALGYADVSMFVSLISIWGFFGRILSGSLSEHFLKKLGTPRPLWNAASQILMTIGYILMAMAMPGSLYIGSVIVGLCYGVRLSITVPTASELFGLKYYGLIYNILILNLPIGSFLFSGLLAGFLYDMEATPTEGGGNTCIGGHCYRIVFVVMALACGIGLVLDIWLAYRTKGLYSKLKGNKRSKKGSSNNSSLS 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3808290 3810207 + CmoCh20G007580.1 Cmo20g00758 405075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00758 547 Gene3D MFS general substrate transporter like domains 324 545 IPR036259 -
Cmo20g00758 547 Pfam Nodulin-like 14 264 IPR010658 -
Cmo20g00758 547 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 540 - -
Cmo20g00758 547 CDD MFS_Mch1p_like 13 513 - -
Cmo20g00758 547 SUPERFAMILY MFS general substrate transporter 14 525 IPR036259 -
Cmo20g00758 547 Gene3D MFS general substrate transporter like domains 10 209 IPR036259 -
Cmo20g00758 547 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 9 540 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01732 Cmo20g00758 CCT
Cmo02g00245 Cmo20g00758 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g00075 Cmo-Chr15:395182 Cmo20g00758 Cmo-Chr20:3808290 3.71E-116 dispersed
Cmo16g00565 Cmo-Chr16:2751710 Cmo20g00758 Cmo-Chr20:3808290 1.97E-81 dispersed
Cmo20g00758 Cmo-Chr20:3808290 Cmo13g00229 Cmo-Chr13:1783837 4.63E-98 dispersed
Cmo11g01732 Cmo-Chr11:12254138 Cmo20g00758 Cmo-Chr20:3808290 0 wgd
Cmo02g00245 Cmo-Chr2:1149456 Cmo20g00758 Cmo-Chr20:3808290 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00758 - - cmos:111448555 992.26