Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00764 ATGGCGGCAACTGTGTCACCGTGGGGAAAGCCCGGAGCGTGGGCTTTGGATGCGGAGGAGCATGAGGAGGAGCTGCTCAAGGACCAGTCGCGCCAGGAATCGGAGCCCAGCGCTGACTTTCCATCCCTCGCCGCCGCGGCCGCCACTAAGCCGAAGAAAAAGAAAGGTCAGTCCATTCCCTTGTCGGAGTTTCAGGCCTATGGTGATTCAAAGCCGTCGGGTCGATCCAATGAGCCAAGGGGTCTTACGGCCGAAGATCTAATGATGCTTCCGACGGGTCCGCGTCAGAGAACAGAGGAGGAGTTGGACCGCAATCGGCTCGGAGGAGGGTTCAAGAGTTGGGGTCAGAATAGTTTGTATGACAGGGGGAATCGGTATTCTAATGGTGAAGACTCGCCGAATTCTCGACGGGGTTCTAGGGTTTTTGATGAATCCAATAGGGAATCGTTGCCCTCTAGGGCTGATGAGATCGATGATTGGGGAGCCGGGAAGAAGCCTCTAATGGGTAATGGGTTTGAGAGGAGAGAGAGAGAGAGAGGAGGAGGTTTTTTCGATTCGCAGTCGTCGAAAGCTGACGAATCGGATAGTTGGGTGTCAAATAAGAGCTTTACACCTTCTGAGGGCCGGAGATCAGGCGGTATAGGTGGCGGTTTTGAGAGAGAGCGAAGAGGAGGTTTTCCCTCGAACGGCGGTGGCGCCGATTCAGACAATTGGGGCAGAAAATCTGAAGGGCCTAAAGGTAGAATTGGTGAGAACGGTGGTGGGGCTCATTCTGATAATTGGGGCAGAAAATTTGAAGGGGCGAGGGGTGGATTTGGTGAGAATGGTGGTGGGGCTGATTCGGATAATTGGGGCAAAAAATCTGAAGGGGTTAGAGGTGGAATTGGTGAGAGGCCGAGGCTTAATCTGCAGCCTCGTTCCATCCCTTTGAACAATGAGAATCAGGAGGCTTCTGTGGCTGCAGTGAAGCCAAAGGGTTCCAATCCTTTCGGGAATGCAAGACCAAGGGAACAGGTATTGGCTGAAAAGGGGCAGGACTGGAAGAAGATTGATGAGCAGCTGGAATCAACAAAGATCAAGGATACGGTGGAGAGGGCCGACAGATTTAGTGGGGCTTCGTTTGAGAGAAAAGGGTTTGGAGCTCGAAGTGGTAGGTCTCCTGATGATCGGTCAGGGCCAGGGAGGAGTTGGAGGAAGCCAGAGTCTGTGCAGTCTCGTCCCCAAAGTGCTGAGGTGGTTGAAGATGGAGCTGGTGGGGAAAACTGA 1266 53.48 MAATVSPWGKPGAWALDAEEHEEELLKDQSRQESEPSADFPSLAAAAATKPKKKKGQSIPLSEFQAYGDSKPSGRSNEPRGLTAEDLMMLPTGPRQRTEEELDRNRLGGGFKSWGQNSLYDRGNRYSNGEDSPNSRRGSRVFDESNRESLPSRADEIDDWGAGKKPLMGNGFERRERERGGGFFDSQSSKADESDSWVSNKSFTPSEGRRSGGIGGGFERERRGGFPSNGGGADSDNWGRKSEGPKGRIGENGGGAHSDNWGRKFEGARGGFGENGGGADSDNWGKKSEGVRGGIGERPRLNLQPRSIPLNNENQEASVAAVKPKGSNPFGNARPREQVLAEKGQDWKKIDEQLESTKIKDTVERADRFSGASFERKGFGARSGRSPDDRSGPGRSWRKPESVQSRPQSAEVVEDGAGGEN 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 3837167 3839361 - CmoCh20G007640.1 Cmo20g00764 405081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00764 421 MobiDBLite consensus disorder prediction 1 344 - -
Cmo20g00764 421 MobiDBLite consensus disorder prediction 169 183 - -
Cmo20g00764 421 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 243 - -
Cmo20g00764 421 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 257 405 - -
Cmo20g00764 421 Pfam Plant specific eukaryotic initiation factor 4B 7 240 IPR010433 GO:0003743
Cmo20g00764 421 Pfam Plant specific eukaryotic initiation factor 4B 244 377 IPR010433 GO:0003743
Cmo20g00764 421 MobiDBLite consensus disorder prediction 15 34 - -
Cmo20g00764 421 MobiDBLite consensus disorder prediction 117 135 - -
Cmo20g00764 421 MobiDBLite consensus disorder prediction 136 162 - -
Cmo20g00764 421 MobiDBLite consensus disorder prediction 381 396 - -
Cmo20g00764 421 MobiDBLite consensus disorder prediction 366 421 - -
Cmo20g00764 421 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 243 IPR010433 GO:0003743
Cmo20g00764 421 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 257 405 IPR010433 GO:0003743
Cmo20g00764 421 MobiDBLite consensus disorder prediction 187 207 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01728 Cmo20g00764 CCT
Cmo02g00319 Cmo20g00764 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo12g00028 Cmo-Chr12:163125 Cmo20g00764 Cmo-Chr20:3837167 4.77E-06 dispersed
Cmo11g01728 Cmo-Chr11:12225354 Cmo20g00764 Cmo-Chr20:3837167 2.56E-109 wgd
Cmo02g00319 Cmo-Chr2:1634465 Cmo20g00764 Cmo-Chr20:3837167 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00764 - - csv:101214573 617.076