Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00933 ATGGAGACGTGGTTCATCATCATCATTTCGCTCTGTTTCTGTTCCCTTCTGAACTCCATTTTTTCCCACTTCCGAAGCTCCACCAATCTCCCACCAGGCCCTCCTTCCATCCCCATCTTCACCAATCTCCAATGGCTCCGCAGATCCCCTCTTCAAATCGAGTCTCTTCTCCGCACCCTCGTCGCCAAATACGGCCCCATCATCACCCTCCCCATCGGCACTCGCCCCACCGTCTTCATCGCCGACCGCTCCATCGCCCACAACGCCCTTGTCCTAAACGGCGCTCTCTTCGCCGACCGTCCACCTGCACTTCCCATCAGCAAGATCGCCTCCAGCAACCAGCATAATATCAACACCGCCTCTTATGGCCCACTCTGGCGCCTCCTCCGCCGTAATCTCACTTCCCAAATCCTCCATCCTTCCCGGGTCAGATCCTACTCTCGTGCTCGCAAATGGGTTTTGGATATTCTTATTGATCGGTTCCTCTCTCACTCTCAATTGAGAGAACCCATTTGCGTTGTGGATCATTTTCAGTATGCTATGTTTTGTTTGTTGGTGTTGATGTGCTTTGGAGACAAGCTTGAGGAATCCCAGATCAAGGAAATTGAGAACGTGCAGCGTAAGATGCTGGTAAACCTTGGGCTTTTCAACGCTCTCAATTTCTGGCCCAAATTGACCAAGATTTTCCTCCGAAAGCGCTGGGAGACGTTTCATGAACTCAAGAGGAATCGAGATGAAGTCACCATCCCTTTAATCGAAGCAAGAAGGAAGGCCATCCAAAACAGAGAAAACAGAGAAAACAGAGCAAACAGAGCCGAAGCTGAAGAAGAAAAAGAAGAATTCGTGGTGTCATATGTGGATACCCTTCTCGATTTGGAGCACCCAGACGAGAAGAGAAAGCTTACAGATGAAGAAATGTCCACACTAGCCTCTGAATTCCTCAACGCGGGCACCGACACCACGTCCACGGCCCTGCAATGGATAATGGCGAATTTGGTGAAATACCCAGAAATCCAACACAAGCTTTTTGCTGAGATGAAAGGAGTAATGGGAGATGGAACGGGGGAGGAGGTGAAGGAAGAGGATTTGGGGAAGCTTCCATATCTGAAAGCTGTGGTTTTGGAAGGATTAAGAAGACACCCACCAGGGCATTTCGTGTTACCACACGCAGTGAAAGATGACACGATGTTGGAGAATTACGTGATACCAAAGAACGGAACTGTAAATTTCATGGTGGCGGAGATGGGTTGGGATCCGGAAGTGTGGGAAGATCCGATGGCGTTCAAGCCGGAGAGGTTCATGAAGGGCGGGGAAGAAGAAGAAGTGGCGGGGTTTGATATAACAGGGAGCAAGGAGATAAAGATGATGCCGTTCGGCGCAGGGAGGAGGATGTGCCCAGGATTCGGTCTGGCAATTCTTCATTTGGAGTATTTCATAGCCAATCTGGTTTGGAGGTTTGAATGGAAGGCGGTGGAGGGCGACGGCGTCGATCTGTCGGAGAAGGTGGAGTTCACGGTGGTGATGGAGAAGCCTCTGAAAGCCAACATAATTCCCAGGTCTTAA 1563 50.22 METWFIIIISLCFCSLLNSIFSHFRSSTNLPPGPPSIPIFTNLQWLRRSPLQIESLLRTLVAKYGPIITLPIGTRPTVFIADRSIAHNALVLNGALFADRPPALPISKIASSNQHNINTASYGPLWRLLRRNLTSQILHPSRVRSYSRARKWVLDILIDRFLSHSQLREPICVVDHFQYAMFCLLVLMCFGDKLEESQIKEIENVQRKMLVNLGLFNALNFWPKLTKIFLRKRWETFHELKRNRDEVTIPLIEARRKAIQNRENRENRANRAEAEEEKEEFVVSYVDTLLDLEHPDEKRKLTDEEMSTLASEFLNAGTDTTSTALQWIMANLVKYPEIQHKLFAEMKGVMGDGTGEEVKEEDLGKLPYLKAVVLEGLRRHPPGHFVLPHAVKDDTMLENYVIPKNGTVNFMVAEMGWDPEVWEDPMAFKPERFMKGGEEEEVAGFDITGSKEIKMMPFGAGRRMCPGFGLAILHLEYFIANLVWRFEWKAVEGDGVDLSEKVEFTVVMEKPLKANIIPRS 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4837066 4838628 + CmoCh20G009330.1 Cmo20g00933 405250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00933 520 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Cmo20g00933 520 Gene3D Cytochrome P450 24 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 SUPERFAMILY Cytochrome P450 31 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 Coils Coil 255 280 - -
Cmo20g00933 520 Pfam Cytochrome P450 31 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00933 520 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 517 - -
Cmo20g00933 520 PANTHER CYTOCHROME P450 4 517 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo20g00933 Cmo-Chr20:4837066 Cmo20g00936 Cmo-Chr20:4868601 0 dispersed
Cmo20g00933 Cmo-Chr20:4837066 Cmo20g00934 Cmo-Chr20:4851581 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00933 K24184 - csv:101204559 858.211