Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo20g00934 | ATGGAGATTTGGTTCGTCGCCATCGTCTCCCTCTGCATCTGCTTTCTTCTAACCTCCATTTTTAGCCATTTCCGAAGCTCCACCAATCTCCCACCAGGCCCTCCTTCAATACCCATCATCACAACTTTCCTGTGGCTTCGCCGATCGCCTCTCCAACTTGAATCTTTCCTCCGCAGTTTCGCCGCCAAATATGGCCCCGTCGTCACCCTCCGCATCGCCAACCGCCCCACCATCTTTATCTCCGACCGCTCTATTGCTCATAAAGCCCTCCTCCAAAACGGTGCTCTCTTCGCCGACCGTCCACGGGCTCCGCCCATGAGCAAGATCATCTCCAGCAACCAACACAACATCAGTTCCGCCTCTTACGGCCCACTCTGGCGCCTCCTACGTCGCAATCTCACTTTCCAAATCCTTCATCCTTCTCGGATTAAGTCCTATAATCGAGCTCGCAAGTGGGTTTTGGATATTCTTCTTAATCGGCTTGTTTCTCATTCGAAATCTGAAACTCCCGTTACTGTCGTCGATCATTTTCAGTACGCTATGTTCTGTTTGTTAGTGTTGATGTGCTTTGGGGATAAGCTTGAGGAACCCCAGATTTATGAAATTGAAAACGTACACCGAGCTATGCTGTTGGGCTTTCTCCGTTTCAACGTCCTTAATTTCTGGCCGAAATTGACGAAGATTTTGCTCCGTAAGCGCTGGGAGGCGTTCTTGGAAATTAGAAGAAATCAGGAGAAAGTCATCATCCCTTTGATTGAAGCAAGAAGGAAGGCCAACCAAAACAGAGCAAACAGAGAAAACAGAGCCGAAACTGAAGAAGATTTCGTGGTGTCATATGTGGACACACTCCTCGATTTGGAGATTCCCGACGAGGACAATAGGAAGCTTACCGATGAGGAGATTGTGACCATATGCTCGGAATTCCTCAACGCCGGCACCGACAACACGTCCACGGCCTTGCAGTGGATAATGGCGAATATAGTGAAATACCCAGAAATCCAACACAAGCTTGTTGCTGAGATGAAAGGAGTAATGGGGGATGGAACGGGGGAGGAGGTGAAGGAAGAGGATTTGGGGAAGCTTCGATATCTGAGAGCTGTGGTTTTAGAAGGATTAAGAAGACACCCACCAACGCATTTCGTGTTACCACACGCAGTGAAAGAAGACACGGTGTTGGAGAATTACGTGATACCAAAGAACGGAACTGTAAATTTCATGGTGGCGGAGATGGGTTGGGATCCGGAAGTGTGGGAAGATCCGATGGCGTTCAAGCCGGAGAGGTTCATGAAGGGCGGGGAAGAAGAAGAAGAAGTGGCGGGGTTTGATATAACAGGGAGCAAGGAGATAAAGATGATGCCGTTCGGCGCAGGGAGGAGGATGTGCCCAGGATTCGGTCTGGCAATTCTTCATTTGGAGTATTTCATAGCCAATCTGGTTTGGAGGTTTGAATGGAAGGCGGTGGAGGGCGAAGGCGTCGATCTGTCGGAGAAGGTGGAGTTCACGGTGGTGATGGAGAAGCCTCTGAAAGCCAACATAATCCCCAGGTCTTAA | 1551 | 49.52 | MEIWFVAIVSLCICFLLTSIFSHFRSSTNLPPGPPSIPIITTFLWLRRSPLQLESFLRSFAAKYGPVVTLRIANRPTIFISDRSIAHKALLQNGALFADRPRAPPMSKIISSNQHNISSASYGPLWRLLRRNLTFQILHPSRIKSYNRARKWVLDILLNRLVSHSKSETPVTVVDHFQYAMFCLLVLMCFGDKLEEPQIYEIENVHRAMLLGFLRFNVLNFWPKLTKILLRKRWEAFLEIRRNQEKVIIPLIEARRKANQNRANRENRAETEEDFVVSYVDTLLDLEIPDEDNRKLTDEEIVTICSEFLNAGTDNTSTALQWIMANIVKYPEIQHKLVAEMKGVMGDGTGEEVKEEDLGKLRYLRAVVLEGLRRHPPTHFVLPHAVKEDTVLENYVIPKNGTVNFMVAEMGWDPEVWEDPMAFKPERFMKGGEEEEEVAGFDITGSKEIKMMPFGAGRRMCPGFGLAILHLEYFIANLVWRFEWKAVEGEGVDLSEKVEFTVVMEKPLKANIIPRS | 516 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 4851581 | 4853131 | + | CmoCh20G009340.1 | Cmo20g00934 | 405251 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo20g00934 | 516 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 4 | 513 | - | - | |
Cmo20g00934 | 516 | Gene3D | Cytochrome P450 | 24 | 516 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00934 | 516 | SUPERFAMILY | Cytochrome P450 | 31 | 515 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00934 | 516 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506|GO:0016705 | |
Cmo20g00934 | 516 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00934 | 516 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00934 | 516 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00934 | 516 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00934 | 516 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00934 | 516 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00934 | 516 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00934 | 516 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00934 | 516 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00934 | 516 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00934 | 516 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00934 | 516 | PRINTS | P450 superfamily signature | 461 | 472 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00934 | 516 | PANTHER | CYTOCHROME P450 | 4 | 513 | - | - | |
Cmo20g00934 | 516 | Pfam | Cytochrome P450 | 31 | 506 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo20g00934 | Cmo-Chr20:4851581 | Cmo20g00936 | Cmo-Chr20:4868601 | 0 | dispersed | |
Cmo20g00933 | Cmo-Chr20:4837066 | Cmo20g00934 | Cmo-Chr20:4851581 | 0 | tandem | |
Cmo20g00934 | Cmo-Chr20:4851581 | Cmo20g00935 | Cmo-Chr20:4859491 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo20g00934 | K24184 | - | csv:101204559 | 797.734 |