Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00935 ATGGCGATGTGGTTCATCATCCTCATCTCCCTCTGCATCTGCTATGTTCTAAGCTCCATTTTTAGCCATTTCCGGAGCTCCACCAAGCTTCCACCAGGCCCTCCTTCAATCCCCATCATCTCCACTTTCCTATGGCTCCGCACATCGCCTCTCCAAATGGAATCTTACCTCCGCACCGCCGTCGCCAAATACGGCCCCATCGTCACCCTCCGCATTGGCTCTCGCATCTCCATCTTCATAGCCGACCGCACCATTGCCCACAACGCTCTCCTCCAACACGGCGCTCTCTTCGCCGACCGCCCTCCAGTTCCTCCTTTGGTCAAAATCCTCTCCAGCAACCAGCACAGCATCAACTCCGCCCCTTACGGCCCACTCTGGCGCCTCTTCCGCCGCAATCTCACTTCCCAAATCCTCCATCCTTCCCGTGTCAGATCCTACGCTCCTGCTCGCAAATGGGTTTTGGATATTCTTCTTAAACGCCTTCTCCCGCACTCTGAATCGGGAACTCCCGTCTGTGTTGTGCATCATTTTCAGTATGCCATGTTCTGTTTGTTGGTGCTAATGTGCTTTGGGGATAAACTCGACGAACCCAAAATCAAAGAAGTCGAGAATGTGCAGCGTACGATGCTGCTAAATCTTAGGCGTTTTGGTCTCCTTAATTTATCGCCTAAATTGACAAAGATTTTCCTTCCAAAACGCTGGGAGGAGTTTCTCCAACTAAGAAGGAACCAAGAGAGAGTCATAATCCCTCTAATCGAAGCAAGGAGGAAGGACAAGCAAAACAGAGGAAACAGAGAAGAAAACAGAGAAGGTAAAGAAGAAGAAGAAGAAGAAGAAGATGAAGATTTCGTGTTGTCGTATGTGGACACACTCCTCGAATTACACCTCCCCGAAGAGGGCAATAGAAAGGTAACAGACGGCGAAATGGTCGGTCTATGCTCGGAATTCCTCACCGGCGGCACCGATACCACCTCCACGACCATGCAGTGGATAATGGCGAATTTAGTGAAACACCCAGAAATCCAACATAAGCTCTTCGAAGAGATCAAGGGAGTAATGGGAGATGGAACAGGGGAGGAGGTTCAGGAAGAGGATTTGGGGAAACTTCCATATCTGAAAGCAGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGGCTTTTCCTACAAGCACGAGGAGTGAAAGAGGATATAGAATTCTTAAACTACGTTCTACCCAAGAACGCGTCTGTAAATTTCATGGCAGCGGAGATGGGTCGGGGTGCAGACGTATGGGAAGATCCGATGGCGTTTAAGCCTGAGAGGTTCATGGGAGGAGGAGCGGCGGGGTTTGATGTAACGGGTAGCAAAGAGATAAAGATGATGCCGTTCGGAGCAGGGAGGAGGATTTGCCCAGGATATGGCTTGGGGATCCTTCATTTGGAGTATTTCTTAGCGAATTTGGTATGGAAATTTGAATGGAAGGGTGTGGATGGGGACGATGTTGATCTGTCGGAGAAGGTAGAGTTCACCGTTGTGATGAAAAACCCTCTGAAAGCCAACATAAGTCCCAGGTTTTAA 1560 49.36 MAMWFIILISLCICYVLSSIFSHFRSSTKLPPGPPSIPIISTFLWLRTSPLQMESYLRTAVAKYGPIVTLRIGSRISIFIADRTIAHNALLQHGALFADRPPVPPLVKILSSNQHSINSAPYGPLWRLFRRNLTSQILHPSRVRSYAPARKWVLDILLKRLLPHSESGTPVCVVHHFQYAMFCLLVLMCFGDKLDEPKIKEVENVQRTMLLNLRRFGLLNLSPKLTKIFLPKRWEEFLQLRRNQERVIIPLIEARRKDKQNRGNREENREGKEEEEEEEDEDFVLSYVDTLLELHLPEEGNRKVTDGEMVGLCSEFLTGGTDTTSTTMQWIMANLVKHPEIQHKLFEEIKGVMGDGTGEEVQEEDLGKLPYLKAVVLEGLRRHPPGLFLQARGVKEDIEFLNYVLPKNASVNFMAAEMGRGADVWEDPMAFKPERFMGGGAAGFDVTGSKEIKMMPFGAGRRICPGYGLGILHLEYFLANLVWKFEWKGVDGDDVDLSEKVEFTVVMKNPLKANISPRF 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4859491 4861050 + CmoCh20G009350.1 Cmo20g00935 405252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00935 519 Gene3D Cytochrome P450 24 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00935 519 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00935 519 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00935 519 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00935 519 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00935 519 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00935 519 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00935 519 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00935 519 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 517 - -
Cmo20g00935 519 SUPERFAMILY Cytochrome P450 31 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00935 519 Pfam Cytochrome P450 31 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00935 519 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00935 519 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00935 519 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00935 519 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00935 519 MobiDBLite consensus disorder prediction 259 281 - -
Cmo20g00935 519 PANTHER CYTOCHROME P450 4 517 - -
Cmo20g00935 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo20g00935 Cmo-Chr20:4859491 Cmo20g00938 Cmo-Chr20:4885103 0 dispersed
Cmo20g00934 Cmo-Chr20:4851581 Cmo20g00935 Cmo-Chr20:4859491 0 tandem
Cmo20g00935 Cmo-Chr20:4859491 Cmo20g00936 Cmo-Chr20:4868601 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00935 K24184 - csv:105434706 810.446