Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00936 ATGGAGATTTGGTTCGTCGCCATCGTCTCCCTCTGCGTCTGCTCTCTTCTAACCTCCATTTTTACCCATTTCCGAAGCTCCACCAATCTCCCACCAGGCCCTCCTTCAGTACCCATCATCACAACTTTCCTGTGGCTCCGCCAATCGCCTCTCCAAATTGAATCTCTCCTCCGCAGTTTCGCCGCCAAATATGGCCCCGTCGTCACCCTCCGCATCGCCAACCGCCCCACCATCTTTATCTCCGACCGCTCTATTGCTCACAAAGCCCTCCTCCAAAACGGTGCTCTCTTCGCCGACCGTCCACCGGCTCCACCCATGAGCAAGATCATCTCCAGCAACCAACACAACATCAGCTCCGCCTCTTACGGCCCACTCTGGCGCCTCCTCCGTCGCAATCTCACTTTCCAAATCCTTCATCCTTCTCGGGTTAAGTCCTATAATCGAGCTCGCAAGTGGGTTTTGGATATTCTTCTTAATCGACTTGTTTCTCATTCGAAATCTGAAACTCCCGTTACTGTCATCGATCATTTTCATTACGCTATGTTCTGTTTGTTGGTGTTGATGTGCTTTGGGGATAAGCTTGAGGAACCCCAGATTCATGAAATTGAAAACGTACACCGAGCTATGCTGTTGAGTTTTCGCCGTTTCAACGTCCTTAATTTCTGGCCGAAATTGACGAAGATTTTGCTCCGTAAGCGCTGGGAGGCGTTCTTGGAAATCAGAAGAAATCAGGAGAAAGTCATCATTCCTTTGATTGAAGCAAGAAGGAAGGCCAACCAAAACAGAGCAAACAGAGAAAACAGAGCCGAAACCGAAGAAGCTTTCGTGGTGTCATATGTGGACACACTCCTCGATTTGGAGCTTCCCGACGAGGACAATAGAAAGCTTACAGATGAGGAGATTGTGACCATATGCTCGGAATTCCTCAACGCCGGCACCGACACGACGTCGACGGCCTTGCAGTGGATAATGGCGAATATAGTGAAATACCCAGAAATCCAACACAAGCTTTTTGCAGAGATGAAAGGAGTAATGGGGGATGGAACAGGGGAGGAGGTGAAGGAAGAGGATTTGGGGAAGCTTCCATATCTGAGAGCTGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGGCATTTCGTGTTACCACACGCAGTGAAAGAGGACACGATGTTGGAGAATTACGTGATACCAAAGAATGGGAGTGTAAATTTCATGGTGGCGGAGATGGGTTGGGATCCGGAGGTGTGGGAAGATCCGATGGCGTTCAAGCCGGAGAGGTTCATGAAGGGCGGGGAAGAAGAAGAAGTGGCGGGGTTTGATATAACAGGGAGCAAGGAGATAAAGATGATGCCGTTCGGCGCAGGGAGGAGGATGTGCCCAGGATTCGGTCTGGCAATTCTTCATTTGGAGTATTTCATAGCCAATCTGGTTTGGAGGTTTGAATGGAAGGCGGTGGAGGGCGACGGCGTCGATCTGTCGGAGAAGGTGGAGTTCACGGTGGTGATGGATAAGCCTCTCAAAGCCAACATTCATCCCAGGTGA 1545 50.03 MEIWFVAIVSLCVCSLLTSIFTHFRSSTNLPPGPPSVPIITTFLWLRQSPLQIESLLRSFAAKYGPVVTLRIANRPTIFISDRSIAHKALLQNGALFADRPPAPPMSKIISSNQHNISSASYGPLWRLLRRNLTFQILHPSRVKSYNRARKWVLDILLNRLVSHSKSETPVTVIDHFHYAMFCLLVLMCFGDKLEEPQIHEIENVHRAMLLSFRRFNVLNFWPKLTKILLRKRWEAFLEIRRNQEKVIIPLIEARRKANQNRANRENRAETEEAFVVSYVDTLLDLELPDEDNRKLTDEEIVTICSEFLNAGTDTTSTALQWIMANIVKYPEIQHKLFAEMKGVMGDGTGEEVKEEDLGKLPYLRAVVLEGLRRHPPGHFVLPHAVKEDTMLENYVIPKNGSVNFMVAEMGWDPEVWEDPMAFKPERFMKGGEEEEVAGFDITGSKEIKMMPFGAGRRMCPGFGLAILHLEYFIANLVWRFEWKAVEGDGVDLSEKVEFTVVMDKPLKANIHPR 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4868601 4870145 + CmoCh20G009360.1 Cmo20g00936 405253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00936 514 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00936 514 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00936 514 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00936 514 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00936 514 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00936 514 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00936 514 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00936 514 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00936 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Cmo20g00936 514 Pfam Cytochrome P450 31 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00936 514 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00936 514 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00936 514 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00936 514 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00936 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 512 - -
Cmo20g00936 514 SUPERFAMILY Cytochrome P450 31 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00936 514 Gene3D Cytochrome P450 24 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00936 514 PANTHER CYTOCHROME P450 4 512 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00481 Cmo-Chr2:2642406 Cmo20g00936 Cmo-Chr20:4868601 6.83E-152 dispersed
Cmo04g02650 Cmo-Chr4:19269559 Cmo20g00936 Cmo-Chr20:4868601 1.32E-113 dispersed
Cmo15g00488 Cmo-Chr15:2228428 Cmo20g00936 Cmo-Chr20:4868601 2.34E-117 dispersed
Cmo15g01107 Cmo-Chr15:7436843 Cmo20g00936 Cmo-Chr20:4868601 0 dispersed
Cmo15g01108 Cmo-Chr15:7441035 Cmo20g00936 Cmo-Chr20:4868601 0 dispersed
Cmo17g01339 Cmo-Chr17:10477015 Cmo20g00936 Cmo-Chr20:4868601 0 dispersed
Cmo20g00933 Cmo-Chr20:4837066 Cmo20g00936 Cmo-Chr20:4868601 0 dispersed
Cmo20g00934 Cmo-Chr20:4851581 Cmo20g00936 Cmo-Chr20:4868601 0 dispersed
Cmo20g00936 Cmo-Chr20:4868601 Cmo20g00938 Cmo-Chr20:4885103 0 dispersed
Cmo20g00957 Cmo-Chr20:5202891 Cmo20g00936 Cmo-Chr20:4868601 4.15E-150 dispersed
Cmo20g00935 Cmo-Chr20:4859491 Cmo20g00936 Cmo-Chr20:4868601 0 tandem
Cmo20g00936 Cmo-Chr20:4868601 Cmo20g00937 Cmo-Chr20:4879104 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00936 K24184 - csv:101204559 808.135