Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00937 ATGGCGATGTGGTTCATCATTGTCATCTCCCTCTGCATCAGCTATGTTCTAAGCTCCATTTTAAGCCATTTTCGAAGCTCCACAAAGCTTCCACCAGGCCCTCCTTCAATCCCCATCATCTCCACTTTCCTATGGCTCCGCACATCCAATCTCCAATTGGAGTCTTACCTTCGCACCGCCGTCGCCAAATATGGCCCCATCGTCACCCTCCGCAGAGGCTCTCGCCTCTCCATCTTCATCGCCGACCACTCAATTGCCCACAAGATCCTCGTCCAAAACGGTGCTCTGTTTTCCGGCCGTCCACCGGCGCAACCTGTTAGCAAGCTCTTAACAAGTAACCAACACAGCATCAGCTCTGCCTCTTACGGCCCACTCTGGCGTCTTCTCCGCCGCAATCTCACTTCCCAAATCCTTCATGCTTCTCGGGTTAAGTCCTATAATCGAGCTCGCAAGTGGGCTTTGGATAATCTTCTTAATCGGCTTGTTTCTCATTCGAAATCTGAAACTCCCGTTACCGTCATCGATCATTTTCATTACGCCATGTTTTGTTTGTTGGTGTTGATGTGCTTTGGGGATAGGCTTGACGAACCCCATATTAGGGAAATCATGGACGTGGAGCGAGCGGTTGTATTGAGTTATGAGCGTTTCAATGTTCTCAATTTCTGGCCTAAATTCACCAAGATTTTGCTCCGAAAACGCTGGCAGACGCTTCTCCAACTAAGAAAGAACCAAGAGGACGTCATAATTCCATTGATTGAAGCTCGCCGGAAGGCCAATCAAAACAGAGGAAACAGAGGAAACAGAGAAAACAGAGTAAACAGAGCAAACAGAGCCGACACTGAAGAAGAAAAAGAAGAATTCGTGGTGTCATATGTGGATACCCTTCTCGATTTGGAGATTCCCGACGAGGACAATAGAAAGCTTACCAATGAGGAGATTGTGACCATATGCTCGGAATTCCTCAACGCCGGCACCGACACCACGTCGACGGCCCTGCAATGGATAATGGCGAATTTAGTGAAATACCCAGAAATCCAACACAAGCTTTTTGCAGAGATAAAAGGAGTAATGGGGGATAGAACAGGGGAGGAGGTGAAGGAAGAGGATTTGCGGAAGGTTCCATATCTGAAAGCGGTGGTTTTGGAAGGATTAAGAAGACACCCACCAGGGCATTTCGTGTTACCACACGCAGTGAAAGAAGAAACAGAGTTGGAAAATTACGTGATACCAAAGTATGGGACGGTAGATTTCATGGTGGCGGAGATGGGTTGGGATCCAAAAGTGTGGGAAGATCCGGCGGCGTTTATGCCGGAGCGGTTCTTGAAAGGAGGGAAAGAAGAAGAAGAAGAAGTGGCGGAGTTTGATATAACAGGGAGCAAGGAGATAAAGATGATGCCGTTCGGAGCAGGGAGGAGGATATGCCCAGGATTTGGTCTGGCGATTCTTCATTTGGAGTATTTCCTTGCCAATTTGGTTTGGCGGTCGGAATGGAAGGCCGTGGAGGGAGACGAAGTTGATCTGTCGGAGAAGTTAGAGCTTACGGTTGTCATGAAAAAGCCTCTGAAGGCAAGAATCTATTCCCGAGGATAA 1590 48.18 MAMWFIIVISLCISYVLSSILSHFRSSTKLPPGPPSIPIISTFLWLRTSNLQLESYLRTAVAKYGPIVTLRRGSRLSIFIADHSIAHKILVQNGALFSGRPPAQPVSKLLTSNQHSISSASYGPLWRLLRRNLTSQILHASRVKSYNRARKWALDNLLNRLVSHSKSETPVTVIDHFHYAMFCLLVLMCFGDRLDEPHIREIMDVERAVVLSYERFNVLNFWPKFTKILLRKRWQTLLQLRKNQEDVIIPLIEARRKANQNRGNRGNRENRVNRANRADTEEEKEEFVVSYVDTLLDLEIPDEDNRKLTNEEIVTICSEFLNAGTDTTSTALQWIMANLVKYPEIQHKLFAEIKGVMGDRTGEEVKEEDLRKVPYLKAVVLEGLRRHPPGHFVLPHAVKEETELENYVIPKYGTVDFMVAEMGWDPKVWEDPAAFMPERFLKGGKEEEEEVAEFDITGSKEIKMMPFGAGRRICPGFGLAILHLEYFLANLVWRSEWKAVEGDEVDLSEKLELTVVMKKPLKARIYSRG 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 4879104 4880693 - CmoCh20G009370.1 Cmo20g00937 405254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00937 529 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 525 - -
Cmo20g00937 529 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00937 529 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00937 529 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00937 529 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00937 529 Gene3D Cytochrome P450 24 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00937 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Cmo20g00937 529 PANTHER CYTOCHROME P450 4 525 - -
Cmo20g00937 529 SUPERFAMILY Cytochrome P450 31 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00937 529 MobiDBLite consensus disorder prediction 259 279 - -
Cmo20g00937 529 Pfam Cytochrome P450 31 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00937 529 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00937 529 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00937 529 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00937 529 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00937 529 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00937 529 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00937 529 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00937 529 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo20g00936 Cmo-Chr20:4868601 Cmo20g00937 Cmo-Chr20:4879104 0 tandem
Cmo20g00937 Cmo-Chr20:4879104 Cmo20g00938 Cmo-Chr20:4885103 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00937 K24184 - csv:101220777 750.74