Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo20g00938 | ATGGAGATTTGGTTCATCATCCTCGTCTCCCTCTGCATCAGCTATGTTCTAAGCTCCATTTTAAGCCATTTCCGAAGCTCCACCAAGCTCCCACCAGGCCCTCCTTCAATCCCCATCATCTCCACTTTCCTATGGCTCCGCACATCGCCTCTCCAATTGGAGTCTTACCTCCGCACCGCCGTCGCCAAATACGGCCCCATCGTCACCCTCCGCATTGGCTCTCGCATCTCCATCTTCATAGCTGACCGCACCATTGCCCACAACGCCCTCCTCCAACATGGCGCTCTCTTCGCCGACCGCCCACCACCTCCTCCTTTGACCAAAATCCTCTTCAGCAACCAGCACAGCATCCACTCCGCCCCTTACGGTCCACTCTGGCGCCTCCTCCGCCGCAATCTCACTTCCCAAATCCTCCATCCTTCCCGTGTCAGGTCCTACGCTCCTGCTCGCAAGTGGGTTTTGGATATTCTTCTTAAACGCCTTCTCTCCCACTCTGAATCGGGAACTCCCGTCTGTGTTGCTGATCATTTTCAGTACGCCATGTTCTGTTTGCTGGTGCTAATGTGCTTTGGGGATAAACTCGACGAACCCAAAATCAAAGAAGTCGAGAATGTGCAGCGTACGATGCTGCTAAATCTTAGTCGATTTGGTCTCCTTAACTTATCGCCTAAATTGACAAAGATTTTCCTTCCAAAACGCTGGGAGGAGTTTCTCCAACTAAGAAAGAACCAAGAGAGGGTCATAATCCCTCTAATCGAAGCAAGAAGGAAGGCCAACCAAAACAGAGGAAACAGAGAAAACAGAGAAGGTAAAGAAGAAGAAGAAGAAGATGAAGATTTCGTGTTGTCGTATGTGGATACACTCCTCGAATTACGCCACCCCGAAGAGGAAAATAGGAAGATAACAGACGGCGAAATGGTCAGTCTATGCTCGGAATTCCTCGCCGGCGGCATCGATACCACTGCCACGACCATGCCGTGGATAATGGCGAATTTGGTGAAATACCCAGAAATCCAACACAAGCTTTTTGCAGAGATGAAAGGAGTAATGGGGGATAGAACATCAGAGGAGGTGAAGGAGGAGGATTTGGGGAAACTTCCATATCTGAAAGCAGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGGCTTTTCCTAGAAGCACGAGGGGTGAAAGAGGATATAGAATTCGAAAACTACCTGATACCCAAGACCGCGACTGTAAATTTCATGGCGACGGAGATGGGTCGGGGTGCAGATGTATGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTCATGGGAGGAGGAGCGGCGGCGTTTGATGTAACGGGGAGCAGAGAGATAAAGATGATGCCGTTCGGAGCAGGGAGGAGGATGTGTCCGGGATATGGTTTGGGGATTCTTCATTTGGAATATTACTTAGCGAATATGATATGGAGGTTTGAATGGAAGGCTGTGGATGGTGACGACGTTGATCTGTCGGAGAAGGTAGAGTTCACCGTTGTGATGAAAAACCCTCTGAAAGCCATCATAAGTCCCAGGTTTTGA | 1551 | 49.71 | MEIWFIILVSLCISYVLSSILSHFRSSTKLPPGPPSIPIISTFLWLRTSPLQLESYLRTAVAKYGPIVTLRIGSRISIFIADRTIAHNALLQHGALFADRPPPPPLTKILFSNQHSIHSAPYGPLWRLLRRNLTSQILHPSRVRSYAPARKWVLDILLKRLLSHSESGTPVCVADHFQYAMFCLLVLMCFGDKLDEPKIKEVENVQRTMLLNLSRFGLLNLSPKLTKIFLPKRWEEFLQLRKNQERVIIPLIEARRKANQNRGNRENREGKEEEEEDEDFVLSYVDTLLELRHPEEENRKITDGEMVSLCSEFLAGGIDTTATTMPWIMANLVKYPEIQHKLFAEMKGVMGDRTSEEVKEEDLGKLPYLKAVVLEGLRRHPPGLFLEARGVKEDIEFENYLIPKTATVNFMATEMGRGADVWEDPMAFKPERFMGGGAAAFDVTGSREIKMMPFGAGRRMCPGYGLGILHLEYYLANMIWRFEWKAVDGDDVDLSEKVEFTVVMKNPLKAIISPRF | 516 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 4885103 | 4886653 | - | CmoCh20G009380.1 | Cmo20g00938 | 405255 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo20g00938 | 516 | PANTHER | CYTOCHROME P450 | 4 | 514 | - | - | |
Cmo20g00938 | 516 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00938 | 516 | PRINTS | P450 superfamily signature | 461 | 472 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00938 | 516 | PRINTS | P450 superfamily signature | 371 | 382 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00938 | 516 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00938 | 516 | PRINTS | E-class P450 group I signature | 411 | 435 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00938 | 516 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00938 | 516 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00938 | 516 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00938 | 516 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00938 | 516 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00938 | 516 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00938 | 516 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506|GO:0016705 | |
Cmo20g00938 | 516 | Gene3D | Cytochrome P450 | 24 | 516 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00938 | 516 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 4 | 514 | - | - | |
Cmo20g00938 | 516 | SUPERFAMILY | Cytochrome P450 | 31 | 515 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo20g00938 | 516 | Pfam | Cytochrome P450 | 31 | 507 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo20g00935 | Cmo-Chr20:4859491 | Cmo20g00938 | Cmo-Chr20:4885103 | 0 | dispersed | |
Cmo20g00936 | Cmo-Chr20:4868601 | Cmo20g00938 | Cmo-Chr20:4885103 | 0 | dispersed | |
Cmo20g00937 | Cmo-Chr20:4879104 | Cmo20g00938 | Cmo-Chr20:4885103 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo20g00938 | K24184 | - | csv:105434706 | 800.816 |