Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00986 ATGTTCTTAGATCTTATGTACAATGTTATTATGAGAATGGTGGCGGGGAATAAGCCTTACGAACACGATAAGGGACGATCGAGGGAATTTAGAGAGCTCGTGACAAAGATTATGGCGGTTGGTGGGACAACAAATCCAGGAGACTTCATACCAATATTGAATTGGATTGATCCCACAGGTTTAGAGAAGAAGATTATGAAGCTTGGACGGAAAATGGATGAACTTCTTCAAGAATTAGTTGATGGGATAAGATATCAAAAGGGTACAGGAAACACTATGATTGATCGCTTACTTCATTTGCAAAAAACTGACCCTCAAAATCATACCGACCAAATTATCAAAGGCCTAATACAAATCATATTAATAGCAGGGATTGACACAACAGCCGTAACCTTAGAATGGGCGCTCTCGCATCTACTCAACAATCCAGAGGTTTTGGAGAAAGCAAAAGCCGAGATAGACAGTTCCATTGGACAAGAGTGTCTAGTGAACGAAGCCGATTTGTCGAGTTTGAATTACCTGCAAGGAATAATTTCGGAGACTCTAAGGTTGACCCCAGCAGCTCCTTTGCTAGTGCCACATTGCGCTTCTAAAGACACTAAAATTGGAGGGTATGATGTACCACGTGACACGATTGTATTGATTAATGCTTGGGCTATTCATAGAGATCCAAGCCTTTGGGAAGATGCCACCCGTTTTAAGCCTGAAAGGCATGCAAACCCTATTGGAATTGACTCATATAAATTTCTACCATTTGGGTTGGGGAGGAGAGCCTGCCCTGGAATAGGAATAGCTCAACGAATGGCTACCTTAACTTTGGGAATGTTGATTCAATGCTTTGAGTGGGAAAGAGAGGGCAGTTCATTGGTTGATATGAGTGAAGGCCATCTCTATCTCCTAAAGCGTCCCGTCCATCAAACCCTTCAAAAGCTTTCTAACAAGTATGGCCATGTCTTCTCTCTCCGCTTAGGCTCTCAACTCGTTGTCGTTGTCTCGTCTCCTTCGGCGGTTAAAGAATGCTTCACAATGAATGATATCATTCTAGCAAATCGACCAAGCTCGAACATTATCAAGCACTTGACTTACAACAACACGATCTTTTCGGCGTCCTCATATGGCGATCATTGGCGCGAACTCCGCCGAATTAGCACCATAGAGATATTCTCAGCCAGTCGCCTTAATATGTTTTTGGAGACTAGGAAGGATGAAATCAAACGCGTACTTGGTAAATTGTGTCGCATTTCAAGTGATAGCTTTGCGAGAGTTGAGATGAGTTCCATGATTTCTGAGTTGTCCTCAAATATTGTGATGAGAATGGTGATGGGGAAGAGGTTTTATGGAGAGGGCGTGTTGGATTTGGAACAAGCAAGGAAATTTAGAGATATTGTGAAGCAAGTTATGCAAAAATGTGGGAGTTTTGATTCAAGAAGTTTTATTCCATTGTTGAATTGGATAGATATTACTCATTATGAGAAGAAGATAATAAAACTTGGACAAAGGAATGATGAATTCTTGCAAGGGTTGATTGATGAGCATAGGAATCAAAAGGAAGAAGGAAGAAATACTATGATTGATCATTTACTTTCTTTGCAACAATCCCAACTTGATTTCATGAGTGACCAAGTTATCAAAGGCCTTATAATGGTAATATTGCTTGCAGGCACGGACACAATAGCAGTGACAATAGAATGGGCACTATCTCATTTGCTTAACAATCCGAATGTCTTAAAGAAGGCTAGGATTGAATTGGACTCGATTATTGGACAAGAGCGATTGGTTGAGGAATCAGATATGTCGAAATTAAGTTATTTGCAAGGAGTAATATCCGAGACTCTACGATTAAACCCTGCAGCTCCTTTACTCGTGCCACATTATGCATCTGAAAATTGCTGGATAGCGGGCTACAAAATTCCCCGCGATACAATCATCTTGATTAATGCTTGGGCTATACATAGAGATCCAAATATTTGGGAAGATGCAAATACATTTAACCCTGAAAGATATAAAATTACCATGGTAGATGATTTGTATAAGCTAATTCCTTTCGGCTTGGGGAGGAGAGCTTGCCCTGGTGTGGGAATGGCCCATCGGGTGGTTGGTTTGTCTTTGGCATCATTGATTCAATGCTTTGAATGGAAGAGAGTGAGTAGTGAAGTGGTTGACATGACTGAGGGCGTAGGGCTCACCATCCCTAGAGCTCAACCATTGGAAGCCATGTAA 2220 41.31 MFLDLMYNVIMRMVAGNKPYEHDKGRSREFRELVTKIMAVGGTTNPGDFIPILNWIDPTGLEKKIMKLGRKMDELLQELVDGIRYQKGTGNTMIDRLLHLQKTDPQNHTDQIIKGLIQIILIAGIDTTAVTLEWALSHLLNNPEVLEKAKAEIDSSIGQECLVNEADLSSLNYLQGIISETLRLTPAAPLLVPHCASKDTKIGGYDVPRDTIVLINAWAIHRDPSLWEDATRFKPERHANPIGIDSYKFLPFGLGRRACPGIGIAQRMATLTLGMLIQCFEWEREGSSLVDMSEGHLYLLKRPVHQTLQKLSNKYGHVFSLRLGSQLVVVVSSPSAVKECFTMNDIILANRPSSNIIKHLTYNNTIFSASSYGDHWRELRRISTIEIFSASRLNMFLETRKDEIKRVLGKLCRISSDSFARVEMSSMISELSSNIVMRMVMGKRFYGEGVLDLEQARKFRDIVKQVMQKCGSFDSRSFIPLLNWIDITHYEKKIIKLGQRNDEFLQGLIDEHRNQKEEGRNTMIDHLLSLQQSQLDFMSDQVIKGLIMVILLAGTDTIAVTIEWALSHLLNNPNVLKKARIELDSIIGQERLVEESDMSKLSYLQGVISETLRLNPAAPLLVPHYASENCWIAGYKIPRDTIILINAWAIHRDPNIWEDANTFNPERYKITMVDDLYKLIPFGLGRRACPGVGMAHRVVGLSLASLIQCFEWKRVSSEVVDMTEGVGLTIPRAQPLEAM 739
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 5621715 5628901 - CmoCh20G009860.1 Cmo20g00986 405303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00986 739 Gene3D Cytochrome P450 1 295 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 682 691 IPR017972 GO:0005506|GO:0016705
Cmo20g00986 739 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 1 295 - -
Cmo20g00986 739 PRINTS P450 superfamily signature 606 617 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 PRINTS P450 superfamily signature 680 689 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 PRINTS P450 superfamily signature 123 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 295 - -
Cmo20g00986 739 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 295 738 - -
Cmo20g00986 739 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 295 738 - -
Cmo20g00986 739 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 252 261 IPR017972 GO:0005506|GO:0016705
Cmo20g00986 739 Gene3D Cytochrome P450 296 738 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 PRINTS E-class P450 group I signature 689 712 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 PRINTS E-class P450 group I signature 336 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 PRINTS E-class P450 group I signature 646 670 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 PRINTS E-class P450 group I signature 542 559 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 PRINTS E-class P450 group I signature 312 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 PRINTS E-class P450 group I signature 562 588 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 PRINTS E-class P450 group I signature 431 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 PRINTS E-class P450 group I signature 679 689 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 PRINTS E-class P450 group I signature 605 623 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 Pfam Cytochrome P450 3 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 Pfam Cytochrome P450 297 731 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 SUPERFAMILY Cytochrome P450 2 296 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00986 739 SUPERFAMILY Cytochrome P450 295 736 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo20g00986 Cmo-Chr20:5621715 Cmo20g00988 Cmo-Chr20:5633295 4.55E-140 dispersed
Cmo20g00985 Cmo-Chr20:5600442 Cmo20g00986 Cmo-Chr20:5621715 2.98E-99 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00986 K13260 - mcha:111017884 582.793