Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00990 ATGGATATTCTCTTGCTTTCTATTTCTCTCTTTATATTTCCTCTTCTCTTTGCCTTCAATTTTGTGTTGAAACCACGTCGCTTGAAACTCCCACCAGGCCCTCTCTTTAGTCTTCCACTACTTGGCCATCTCCATCTCCTAAACCATCCCATCCATCGAACACTCACCAACCTTTCTCAAAAATACGGTCATGTCTTCTCCCTCCGATTTGGTTCTCGTCTCGTTGTTGTTATCTCTTCTCCTTCGGCCGTCCAAGAATGCTTCACAAAAAACGATATTGTTCTTGCAAACCGCCCATTTTTGAACTCTACAAAGTACCTAAACTACAACCATACCGTCATGTCGGTCTCCCCTTACGGCGAACATTGGAGAAACCTCCGCCGGATAAGCTCCCTTGAGATCTTCTCAACAAATCGCCTCAATTTGTTCTTGGGAATTCGGGAAGAGGAAATCAAATGTTTGCTATGTAAATTATGTGGGGATTCATTGGAAGATCGATTCAGGGTCGTGGAATTGGAGCCCATGTTGCTTGATCTTATGTTCAATATTGTTACGAGAATGGTGGCTGGGAAGAGGTTTTATGAGCGACATGACAAGTTTAGAGAGATGGTGACACAAATTATGGCTCACAGTGGAGCAACCAATCCAGGAGATTTCATACCCTTATGGAGATTCATTGATCCAAGTGGTTTTGAGAAGAGGGTAAAGAAGCTTGGGAAGACATCTGATGAACTCCTTCAAGAATTAGTGGATGAAATTCGAGATAAAAATGATGGAGGGAACACTATGATTCACCGTTTACTTAGCTTGCAGAATACCGAGCCTGAATATTACAGCGATCAAATTATCAAAGGATTGATTCAATGGACAGTATCACAATTGCTCAACCATCCAGAGGTGTTAGAGAAAGCAAGAGCTGAGATAGACAGTTCGATTGGGTACGAGCGTTTAGTTAACGAATCTGATCTGCCGAGTTTGAGTTATGTTCAAGGAATAATCTCTGAGACTTTGCGGCTTCACCCAGCTGCTCCTCTTCTTTTGCCGCATTGTGCATTTGAAGAATGCAAAATAGAAGGATATGATGTTCCTCGTGATACGATAATATTCATCAATGCTTGGGCCATGCATAGAGACCCGAATCTATGGGAAGATGCTACCAGCTTTAAACCTGAAAGACATGCAAATGGGATGAAGAATGGCGCAGAGTCATACAAACTGATACCATTTGGGTTGGGGAGGAGAGCTTGTCCTGGTTTGGGAATGGCGCAACGAGTGGCTGGCTTGACTTTAGCATCGTTGATACAAGGCTTTGAATGGGAAAGATTGAACAACTCTTTAGTTGACATGAGTGAAGGTAAAGGGATTACAATGCCCAAAGCTCAACCCTTGGTAGCCAAGTGTAAGCCACGCCCCATCATGAAACTCGTTTATGCATGTACCAATTGA 1446 43.02 MDILLLSISLFIFPLLFAFNFVLKPRRLKLPPGPLFSLPLLGHLHLLNHPIHRTLTNLSQKYGHVFSLRFGSRLVVVISSPSAVQECFTKNDIVLANRPFLNSTKYLNYNHTVMSVSPYGEHWRNLRRISSLEIFSTNRLNLFLGIREEEIKCLLCKLCGDSLEDRFRVVELEPMLLDLMFNIVTRMVAGKRFYERHDKFREMVTQIMAHSGATNPGDFIPLWRFIDPSGFEKRVKKLGKTSDELLQELVDEIRDKNDGGNTMIHRLLSLQNTEPEYYSDQIIKGLIQWTVSQLLNHPEVLEKARAEIDSSIGYERLVNESDLPSLSYVQGIISETLRLHPAAPLLLPHCAFEECKIEGYDVPRDTIIFINAWAMHRDPNLWEDATSFKPERHANGMKNGAESYKLIPFGLGRRACPGLGMAQRVAGLTLASLIQGFEWERLNNSLVDMSEGKGITMPKAQPLVAKCKPRPIMKLVYACTN 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 5647937 5650206 - CmoCh20G009900.1 Cmo20g00990 405307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00990 481 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00990 481 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00990 481 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00990 481 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00990 481 PRINTS E-class P450 group I signature 287 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00990 481 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00990 481 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00990 481 Gene3D Cytochrome P450 22 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00990 481 Pfam Cytochrome P450 31 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00990 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Cmo20g00990 481 SUPERFAMILY Cytochrome P450 31 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00990 481 PRINTS P450 superfamily signature 296 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00990 481 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00990 481 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00990 481 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 8 476 - -
Cmo20g00990 481 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 476 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00973 Cmo20g00990 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo20g00990 Cmo-Chr20:5647937 Cmo03g00974 Cmo-Chr3:7335718 6.07E-46 dispersed
Cmo20g00993 Cmo-Chr20:5699730 Cmo20g00990 Cmo-Chr20:5647937 1.09E-128 dispersed
Cmo20g00994 Cmo-Chr20:5706537 Cmo20g00990 Cmo-Chr20:5647937 5.00E-21 dispersed
Cmo20g00990 Cmo-Chr20:5647937 Cmo20g00991 Cmo-Chr20:5661890 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00990 K13260 - mcha:111017884 668.307