Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g00991 ATGGATATTCTCTTGCTTTCTATTTCTCTCTTCCTATTTACTCTTCTCTTTGCCTTCAATTTTGTGCTGAAACCACATCGCTTGAACCTCCCACCAGGCCCTCTCTTATGTCTTCCACTAATTGGCCATCTCCATCTCCTCAACCATCCCATCCATCGAACACTCACCAACCTCTCTCAAAAATACGGCCATGTCTTCTCCCTCCGATTTGGTTCCCGTCTCGTTGTTGTTATCTCTTCTCCTTCTGCCGTACAAGAATGCTTCACAAAGAACGATATTGCTCTTGCAAATCGCCCGCTGTTGAACTCTGGGAAATACCTAGACTACAACCATACCGTCATGTCGGTCTCCCCTTACGGCGAACATTGGAGAAACCTCCGCCGGATCGGCTCCCTTGAGATCTTCTCAACAAATCGCCTCAATTTGTTCTTGGGAGTTCGGAAAGAGGAAATCAAATGTTTGCTATGTAAATTATGTGGGGATTCATTGGAAGATCGATTCAGGGTCGTGGAATTGGAGCCCATGTTGCTTGATCTTATGTTCAATATTGTTATGAAAATGGTGGCTGGGAAGAAGTCTTTTGAGGGACATTCTTACAAGTTTAAAGAAATGGTGACACAAATTATGGCTCATAGTGGAGCAACCAATCCAGCAGACTTCATACCCTTATGGGGTTTCATTGATCCAACCGGTTTTGGGAAGAGGGGAAAGAAGCTTGCAAAGACATCTGATGAACTCCTTCAAGAATTAGTTGATGAAATTCGAGATAAAGAAGATGGAGGGAACACTATGATTCACCGTTTACTTAGCTTGCAGAATACCGAGCCTGAATATTACAGCGATCAAATTATCAAAGGATTGATTCAAGATATATTATTAGCCGGGATTGACACGATAGCTGTGACTTTAGAGTGGGCAATGTCTCAATTGCTCAACAATCCAGAGGTGTTAGAGAAAGCAAGAGCTGAGATAGACAGTTCGATTGGGTACGAGCGTTTAGTTAACGAATCTGATCTGCCGAGTTTGAGTTATGTTCAAGGAATAATCTCTGAGACTTTGCGGCTTCACCCAGCTGCTCCTCTCCTTTTGCCGCATTGTGCATTTGAAGAATGCAAAATAGAAGGATATGATGTTCCTCGTGATACGATAATATTCATCAATGCTTGGGCCATGCATAGAGACCCGAATCTATGGGAAGATGCTACCAGCTTTAAACCTGAAAGACATGCAAATGGGATGAAGAATGGCGCAGAGTCATACAAACTGATACCATTTGGGTTGGGGAGGAGAGCTTGTCCTGGTTTGGGAATGGCGCAACGAGTGGCTGGCTTGACTTTAGCATCGTTGATACAAGGCTTTGAATGGGAAAGATTGAACAACTCTTTAGTTGACATGAGTGAAGGTAAAGGGATTACAATGCCCAAAGCTCAACCCTTGGTAGCCAAGTGTAAGCCACGCCCCATCATGAAACTCGTTTATGAATCTGGCAATTGA 1494 43.57 MDILLLSISLFLFTLLFAFNFVLKPHRLNLPPGPLLCLPLIGHLHLLNHPIHRTLTNLSQKYGHVFSLRFGSRLVVVISSPSAVQECFTKNDIALANRPLLNSGKYLDYNHTVMSVSPYGEHWRNLRRIGSLEIFSTNRLNLFLGVRKEEIKCLLCKLCGDSLEDRFRVVELEPMLLDLMFNIVMKMVAGKKSFEGHSYKFKEMVTQIMAHSGATNPADFIPLWGFIDPTGFGKRGKKLAKTSDELLQELVDEIRDKEDGGNTMIHRLLSLQNTEPEYYSDQIIKGLIQDILLAGIDTIAVTLEWAMSQLLNNPEVLEKARAEIDSSIGYERLVNESDLPSLSYVQGIISETLRLHPAAPLLLPHCAFEECKIEGYDVPRDTIIFINAWAMHRDPNLWEDATSFKPERHANGMKNGAESYKLIPFGLGRRACPGLGMAQRVAGLTLASLIQGFEWERLNNSLVDMSEGKGITMPKAQPLVAKCKPRPIMKLVYESGN 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 5661890 5664317 + CmoCh20G009910.1 Cmo20g00991 405308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g00991 497 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00991 497 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00991 497 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00991 497 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00991 497 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00991 497 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00991 497 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00991 497 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00991 497 Pfam Cytochrome P450 31 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00991 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Cmo20g00991 497 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 492 - -
Cmo20g00991 497 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00991 497 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00991 497 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00991 497 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 7 492 - -
Cmo20g00991 497 SUPERFAMILY Cytochrome P450 31 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo20g00991 497 Gene3D Cytochrome P450 15 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00516 Cmo-Chr2:2868811 Cmo20g00991 Cmo-Chr20:5661890 0 dispersed
Cmo20g00988 Cmo-Chr20:5633295 Cmo20g00991 Cmo-Chr20:5661890 0 dispersed
Cmo20g00991 Cmo-Chr20:5661890 Cmo20g00993 Cmo-Chr20:5699730 4.57E-115 proximal
Cmo20g00991 Cmo-Chr20:5661890 Cmo20g00994 Cmo-Chr20:5706537 7.14E-06 proximal
Cmo20g00990 Cmo-Chr20:5647937 Cmo20g00991 Cmo-Chr20:5661890 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g00991 K13260 - mcha:111017884 701.434