Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g01019 ATGGGAGGAACTAGTTTAGGAAGCTTCGTAATGGTCTTTGTTCTTGTTTTGACATCGTTATTAGCGGTTGTTCCGATGTCCGAGGCACAACTCCGACAGAATTTCTATGCCGATGTTTGCCCTAACGTCGAGAGTATAGTTCGAACTGCAGTCACGAAGAAGTTTCGACAAACGTTTGTTACAGTTCCTGCTACTCTCCGTCTCTTCTTCCATGATTGTTTTGTTCAGGGATGTGACGCGTCAGTGATGATTGGTTCGAATGGAGGCAATCAAGTAGAAAAGGATCATCCAGATAATCTTTCACTAGCAGGAGATGGATTCGATACAGTAATAAAAGCAAAAGCAGCACTTGACGCTGTGCCGGAATGTAGAAACAAAGTCTCGTGTGCAGATATTCTTGTGATGGCGACTCGAGATGTCATTTCATTGGCTCGAGGACCTTCATATGCTGTGGAGCTAGGGAGGAAGGATGGGCTTGTTTCAAGGGCTTCAGATGTGGAGGGAAAATTGCCTCAGCCGAGCTTTAATCTCAATCAATTGAATGCCATGTTTGCTGCTCATGGCCTCTCTCAGGCTGACATGATTGCTCTGTCTGCTGCGCACACGGTAGGATTCTCCCACTGCACGAAGTTCTTGAACAGGATATACAATTTCAGCCGTACAAATCCAGTGGATCCGACGTTGAACGCGACATATGCAGCCAAGCTTCAAGGAATGTGTCCGAGAGACGTGGATCCAAGGATAGCAATAGACATGGATCCAAACACTCCCACTAGATTCGACAATATGTACTTCAAGAATCTCCAGCAAGGAATGGGCCTTTTCACTTCCGACCAAGTCCTCTTCACCGACGCAAGGTCCAGGCCCACTGTCAAGATTTGGGCCCATAGTGGACAAACCTTCTACAAGGCCTTCGTTGATGCCATGACTAAGTTGGGCCGGGTCGGAGTGAAGACCGGATCCAATGGCAATATTCGCACCGACTGTAGTGTTTTCAACTCTTGA 1005 47.06 MGGTSLGSFVMVFVLVLTSLLAVVPMSEAQLRQNFYADVCPNVESIVRTAVTKKFRQTFVTVPATLRLFFHDCFVQGCDASVMIGSNGGNQVEKDHPDNLSLAGDGFDTVIKAKAALDAVPECRNKVSCADILVMATRDVISLARGPSYAVELGRKDGLVSRASDVEGKLPQPSFNLNQLNAMFAAHGLSQADMIALSAAHTVGFSHCTKFLNRIYNFSRTNPVDPTLNATYAAKLQGMCPRDVDPRIAIDMDPNTPTRFDNMYFKNLQQGMGLFTSDQVLFTDARSRPTVKIWAHSGQTFYKAFVDAMTKLGRVGVKTGSNGNIRTDCSVFNS 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 6692431 6693729 + CmoCh20G010190.1 Cmo20g01019 405336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g01019 334 PANTHER PEROXIDASE 8 333 - -
Cmo20g01019 334 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Cmo20g01019 334 Gene3D - 34 333 - -
Cmo20g01019 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Cmo20g01019 334 ProSiteProfiles Plant heme peroxidase family profile. 30 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 Pfam Peroxidase 48 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 PANTHER - 8 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 CDD secretory_peroxidase 30 332 IPR033905 GO:0004601|GO:0042744
Cmo20g01019 334 Gene3D Peroxidase, domain 2 171 312 - -
Cmo20g01019 334 SUPERFAMILY Heme-dependent peroxidases 30 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo20g01019 334 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00964 Cmo20g01019 CCT
Cmo07g00671 Cmo20g01019 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01613 Cmo-Chr1:12314623 Cmo20g01019 Cmo-Chr20:6692431 4.42E-148 dispersed
Cmo15g00076 Cmo-Chr15:397875 Cmo20g01019 Cmo-Chr20:6692431 3.55E-147 dispersed
Cmo20g01019 Cmo-Chr20:6692431 Cmo04g02855 Cmo-Chr4:20358428 3.49E-99 dispersed
Cmo07g01136 Cmo-Chr7:6028779 Cmo20g01019 Cmo-Chr20:6692431 0 transposed
Cmo20g01019 Cmo-Chr20:6692431 Cmo07g00671 Cmo-Chr7:3025898 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g01019 K00430 - csv:101208254 590.497