Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g01057 ATGAATCATGCAACGGGGATCGTGCATGAACCTCCAAATGCCAAGTTTGAGTTCACTCCAACATGGATCGTCGCCGTTGTTTCCTCCATTATCGTTATCATTTCCTTCTCTCTTGAACGTGGCCTTCATCATCTTGGACAGTGGTTGAAACATAAAAAGCAGGATCAACTGAATCACGCCGTGCTGAAATTAAAGGAAGAGTTGATGATCTTAGGGTTTATTTCCCTATTATTGAATGTGTTTCAAGGGGCAATTGGACAGTTCTGTATGCCTAGAGATTTTGCATACCATATGCTTCCATGCAAGAGAACGGTATCTGTTGTTCATCATTTCTCATCTCCTACGTCCCTTGACGGTTATAATACTCACCGTCATCTCCTATCGACCAATACTAATTTTCAACATTGCTTACGAAAAGGAAAGGTTCCTCTATTGTCTTTGGAAGCTTTGCATCAACTCCATATATTCATATTTGTGTTGGCTGTTGTTCATGTCGTCTTTTGTGCTATAACCATGCTTCTAGCTGCTGCAAAGATACAACAGTGGAAAAGATGGGAAGATTCTATTCATCGAGGACTTGCACATTCTCAAAATGATAATGAGTTTAAAGAACGTGCGGAGGGATATTGGCTAAATGCTGCCGTCATAGCTTGGATGGTGGCATTTGTGAAGCAGTTTCATGGATCGATCACAAAGTCGGATTACATTTTTCTTCGACGAGGCTTTATTAAGAAACATTGTCCCGGAGAACCAAATTTTAATTTCTACGACCATATTACAAAGTCCTATCAACATGATTTCAAGAAAGTTGTGGGCATAAGTTGGTATCTTTGGGCCTTTGTAGTGCTCTTCTTGCTGCTTAATCTTGAAGGATGGCACACTTACTTTTGGTTGGCCTTTCTACCACTCATTATGCTACTTCTAGTGGGGGCAAAATTGGAATACATAATTACCCGAATGGCTCAAGAACTAAACTTGAGAACCGTGGACAGAGAAGCACAACAAGAAAATGACATCCATAGATTTCAAAGACGGCATAATGAGATCAAGAAACATGGTAGCCGTCATGAAGTGAATCCCTCAGATGATCATTTTTGGTTTGCTAGTCCTTCTCTTGTTCTCGTTTTGATTCACTTCATTCTCTTTCAAAACTCTTTCGAGATTGCCTTCTTCTTTTGGATTTGGACAACTTATGGGTTCAAGTCTTGCATTATGGAGAGACCGGCTTTTATCATCACCAGACTTGTCCTCGGTGGAATTGTCCAAGTTCTTTGCAGTTATAGCACATTGCCTTTGTACTCTCTAGTCACTCAGATGGGAAGCGAATATAAGAAGCCAACGGAAGAAGCTATTCAATCTCAATCAGTACAAAGATTAAAACAAAAAGCCCTTCAAAGCTATGGAAGAAAAAGGAAGTTGGAGGAAGATGTTAATACCTAA 1440 40.07 MNHATGIVHEPPNAKFEFTPTWIVAVVSSIIVIISFSLERGLHHLGQWLKHKKQDQLNHAVLKLKEELMILGFISLLLNVFQGAIGQFCMPRDFAYHMLPCKRTVSVVHHFSSPTSLDGYNTHRHLLSTNTNFQHCLRKGKVPLLSLEALHQLHIFIFVLAVVHVVFCAITMLLAAAKIQQWKRWEDSIHRGLAHSQNDNEFKERAEGYWLNAAVIAWMVAFVKQFHGSITKSDYIFLRRGFIKKHCPGEPNFNFYDHITKSYQHDFKKVVGISWYLWAFVVLFLLLNLEGWHTYFWLAFLPLIMLLLVGAKLEYIITRMAQELNLRTVDREAQQENDIHRFQRRHNEIKKHGSRHEVNPSDDHFWFASPSLVLVLIHFILFQNSFEIAFFFWIWTTYGFKSCIMERPAFIITRLVLGGIVQVLCSYSTLPLYSLVTQMGSEYKKPTEEAIQSQSVQRLKQKALQSYGRKRKLEEDVNT 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 9750121 9759009 - CmoCh20G010570.1 Cmo20g01057 405374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g01057 479 Pfam Mlo family 15 465 IPR004326 GO:0006952|GO:0016021
Cmo20g01057 479 PANTHER MLO-LIKE PROTEIN 13 15 463 - -
Cmo20g01057 479 PANTHER MLO-LIKE PROTEIN 1 15 463 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo20g01057 Cmo-Chr20:9750121 Cmo02g00883 Cmo-Chr2:5467485 3.45E-109 dispersed
Cmo20g01057 Cmo-Chr20:9750121 Cmo08g00962 Cmo-Chr8:6232734 2.33E-160 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g01057 K08472 K01179 csv:101216903 715.687