Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g01086 ATGTTTGGCAGGGTGGAGACGTTGAGGCTAAAGTCAATAGTAGGATTAGCAAAGGTTGGAGGAATAGTTTTTTGTATGGGCGGTGTGTTGGTTTTGGTTTTCTACAAAGGCCCTCAACTCACATTCTTTAACAATCACCACCTTTTTTCTATACACAAACATCAACAAAATCCACTTCATGTTGCTTCAACCCAAACTTGGATTAAGGGTTGCTTCCTAATGATGGCTTCAAATACCTTGTGGGCTTTATCACTTGTTCTTCAGGCGTTTGTACTGAAATGTTATCCTTCGACACTTCTATTCACTAGTCTTCAGTGCCTTGTTAGCTCATTTCAATCCTTCGTTATTGCCATTGCTTTGGAGAGAAACCTTGACGAATGGAAATTGTCTTGGAATCTTAGACTTCTTTCGGTCGCATATTGTGGAATAGTGGCAACTGGGGTTACATATTCTCTTCAAACATGGATTATTAAGAAGAAAGGACCAGTTTTTTTAGCCATGTCAACACCAATTATTCTCGTCATTACAACTATTTCTTCTGCCGTTCTTCTTGGCGAG 558 39.61 MFGRVETLRLKSIVGLAKVGGIVFCMGGVLVLVFYKGPQLTFFNNHHLFSIHKHQQNPLHVASTQTWIKGCFLMMASNTLWALSLVLQAFVLKCYPSTLLFTSLQCLVSSFQSFVIAIALERNLDEWKLSWNLRLLSVAYCGIVATGVTYSLQTWIIKKKGPVFLAMSTPIILVITTISSAVLLGE 186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 10308282 10309739 - CmoCh20G010860.1 Cmo20g01086 405403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g01086 186 Pfam EamA-like transporter family 69 186 IPR000620 GO:0016020|GO:0016021
Cmo20g01086 186 PANTHER WAT1-RELATED PROTEIN 4 186 IPR030184 GO:0016021|GO:0022857
Cmo20g01086 186 PANTHER WAT1-RELATED PROTEIN 4 186 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo20g01086 Cmo-Chr20:10308282 Cmo07g00804 Cmo-Chr7:3703448 5.34E-53 dispersed
Cmo20g01086 Cmo-Chr20:10308282 Cmo20g01088 Cmo-Chr20:10336094 1.48E-125 proximal
Cmo02g00591 Cmo-Chr2:3540127 Cmo20g01086 Cmo-Chr20:10308282 7.70E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g01086 - - cmax:111470325 356.681