Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo20g01090 | ATGGCGAAATCACCGGAAGATGAACATCCACACAAGGCTTTTGGTTGGGCTGCTCGAGATCCTTCCGGCTTACTCTCCCCTTTCCATTTCTCTCGAAGGGAAAATGGTGATGATGATGTCTCTATCAAAATCCTTTACTGTGGGGTTTGCCACTCTGATTTGCATATGCTCAAGAATGACTGGGGGGCAACAGATTATCCTATAGTCCCTGGGCATGAGATTGTTGGTGTTGTGACTTCTGTTGGTAAAAATGTGAAGAAATTCAAAGCAGGCGATGAAGTTGGGGTTGGTGTCATTGTTGGATCTTGTAGAAACTGTGAAAATTGTAAACAAGACTTGGAGAGTTACTGTCCCAAGATGGAATATACATACAATTCTCCTGCAATCGATGGATCGAAGAATTACGGTGGCTATTCCGACAAGATCGTTGTCGATCAACATTTTGTTGTTCGATTTCCTAAGAACTTAGCTCTTGATGCTGGGGCTCCTCTCCTATGTGCTGGAATTACTGTTTATAGTCCAATGAAATACTTTGGAATGACTGAACCTGGTAAGCATTTGGGTGTGGCTGGACTTGGCGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTTATTAGTACCTCTCCTAGGAAGAAGGAGGAAGCAATCGACAGGCTCGGGGCCGATGCTTTCGTTGTATCGAGTGATCCCGATCAATTGAAGGCTGCCATGGGAACTATGGATTACATTTTGGACACAATATCTGCTGTTCATGCTCTTGATCCATTGATTAGTCTGCTAAACCTCAACGGAAAGTTGGTCGCGGTCGGGTTACCTAACAAACCAGTTGAACTATCGCTCGGGTTTCTAGTCTCTGGAAGGAGATTGATTGCTGGAAGCAACTTTGGTGGACTGAAAGAGACACAAGAGATGTTGGATTTCTGTGGCAAACACAACATTACAGCTGATATTGAGCTCATTAAGATGGATGCCATTAACTCGGCTATCGAAAGGCTCGGGAAAGCTGATGTTAAATATCGGTTCGTGATCGACATCGAAAACTCGTTCAAATCGACGGTACAATAA | 1089 | 43.99 | MAKSPEDEHPHKAFGWAARDPSGLLSPFHFSRRENGDDDVSIKILYCGVCHSDLHMLKNDWGATDYPIVPGHEIVGVVTSVGKNVKKFKAGDEVGVGVIVGSCRNCENCKQDLESYCPKMEYTYNSPAIDGSKNYGGYSDKIVVDQHFVVRFPKNLALDAGAPLLCAGITVYSPMKYFGMTEPGKHLGVAGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFVVSSDPDQLKAAMGTMDYILDTISAVHALDPLISLLNLNGKLVAVGLPNKPVELSLGFLVSGRRLIAGSNFGGLKETQEMLDFCGKHNITADIELIKMDAINSAIERLGKADVKYRFVIDIENSFKSTVQ | 362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
20 | 10384192 | 10388488 | + | CmoCh20G010900.1 | Cmo20g01090 | 405407 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo20g01090 | 362 | PANTHER | ALDEHYDE REDUCTASE | 11 | 358 | - | - | |
Cmo20g01090 | 362 | PANTHER | CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED | 11 | 358 | - | - | |
Cmo20g01090 | 362 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 71 | 85 | IPR002328 | GO:0008270|GO:0016491 | |
Cmo20g01090 | 362 | Pfam | Zinc-binding dehydrogenase | 194 | 315 | IPR013149 | - | |
Cmo20g01090 | 362 | Pfam | Alcohol dehydrogenase GroES-like domain | 38 | 151 | IPR013154 | - | |
Cmo20g01090 | 362 | SMART | PKS_ER_names_mod | 23 | 351 | IPR020843 | GO:0016491 | |
Cmo20g01090 | 362 | Gene3D | - | 167 | 323 | - | - | |
Cmo20g01090 | 362 | CDD | CAD1 | 14 | 352 | - | - | |
Cmo20g01090 | 362 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 158 | 321 | IPR036291 | - | |
Cmo20g01090 | 362 | Gene3D | - | 16 | 353 | - | - | |
Cmo20g01090 | 362 | SUPERFAMILY | GroES-like | 19 | 185 | IPR011032 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g02044 | Cmo-Chr1:14317207 | Cmo20g01090 | Cmo-Chr20:10384192 | 1.21E-142 | dispersed | |
Cmo02g00593 | Cmo-Chr2:3594612 | Cmo20g01090 | Cmo-Chr20:10384192 | 2.45E-171 | dispersed | |
Cmo02g00969 | Cmo-Chr2:5943970 | Cmo20g01090 | Cmo-Chr20:10384192 | 1.76E-119 | dispersed | |
Cmo03g00890 | Cmo-Chr3:6905091 | Cmo20g01090 | Cmo-Chr20:10384192 | 2.37E-170 | dispersed | |
Cmo04g00501 | Cmo-Chr4:2509137 | Cmo20g01090 | Cmo-Chr20:10384192 | 4.39E-116 | dispersed | |
Cmo11g01393 | Cmo-Chr11:9761168 | Cmo20g01090 | Cmo-Chr20:10384192 | 4.76E-123 | dispersed | |
Cmo16g00363 | Cmo-Chr16:1669071 | Cmo20g01090 | Cmo-Chr20:10384192 | 3.64E-122 | dispersed | |
Cmo20g01090 | Cmo-Chr20:10384192 | Cmo16g00159 | Cmo-Chr16:719850 | 4.16E-19 | dispersed | |
Cmo20g01090 | Cmo-Chr20:10384192 | Cmo20g01091 | Cmo-Chr20:10389642 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo20g01090 | K00083 | - | csv:101205228 | 660.218 |