Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo20g01091 ATGGCGAAATCTCCGGAAGATGAACACCCAAACAAGGCTTTTGGATGGGCTGCCCGAGATACATCCGGATTACTCTCTCCATTTCATTTCTCTCGAAGAGATAATGGTGCTGATGATGTGAGTATCAAAATCCTTTACTGTGGGGTTTGCCATTCTGATCTGCACTTGCTCAAGAATGATTGGGGTATCACAAATTATCCATTAGTCCCAGGGCATGAGATTGTTGGTGTTGTGACCTCTGTTGGGAATAATGTGAAGAAATTCAAAGCGGGCGATCAAGTTGGGGTTGGTGTCATAGTTGGATCTTGCAAAAGTTGTGAGAATTGTGATCAGGACTTGGAGAGTTACTGCCCCAAGATGATATATACTTATAACTCGCATTCATATGATGGAGTGAAGAATTATGGTGGTTATTCTGATAAGATCGTCGTCGATCAGCATTTCGTGCTCCGATTTCCCGACAACTTACCTCTTGATGCTGGAGCTCCACTTCTTTGTGCTGGAATCACAGTTTATAGTCCTATGAAATACTATGGCATGACTGAATCTGGTAAGCATTTGGGGGTGGTTGGACTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTCATTAGTACCTCTCCAAGAAAGAAGGAGGAGGCCATCGACAGGCTCGGTGCTGATGCTTTTCTTGCTGCCATGGGGACGATGGATTATATTATCGACACTGTATCCGCTATCCATGCTCTTGCTCCGTTGCTCAGCCTGCTAAAGCTGAATGGAAAGTTGGTCACTGTGGGTTTGCCTAACAAGCCTCTAGAGCTGCCAGTTGTTTCTCTAGTTCTCGGCAGGAGGATGGTTGGTGGTAGCAACTTTGGAGGGCTGAAAGAGACACAAGAGATGTTGGATTTCTGTGCTAAGAACAACATCACTGCAGATATTGAACTCATTCAGATGGACGACATTAACTCGGCCATCGAAAGGCTTGCAAAAGCTGATGTTCGATATCGGTTTGTGATCGACATCGGAAACTCCTTGAAATAG 1050 44.86 MAKSPEDEHPNKAFGWAARDTSGLLSPFHFSRRDNGADDVSIKILYCGVCHSDLHLLKNDWGITNYPLVPGHEIVGVVTSVGNNVKKFKAGDQVGVGVIVGSCKSCENCDQDLESYCPKMIYTYNSHSYDGVKNYGGYSDKIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTESGKHLGVVGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFLAAMGTMDYIIDTVSAIHALAPLLSLLKLNGKLVTVGLPNKPLELPVVSLVLGRRMVGGSNFGGLKETQEMLDFCAKNNITADIELIQMDDINSAIERLAKADVRYRFVIDIGNSLK 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
20 10389642 10392473 + CmoCh20G010910.1 Cmo20g01091 405408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo20g01091 349 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Cmo20g01091 349 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Cmo20g01091 349 Gene3D - 16 344 - -
Cmo20g01091 349 SUPERFAMILY GroES-like 22 185 IPR011032 -
Cmo20g01091 349 Gene3D - 167 314 - -
Cmo20g01091 349 PANTHER ALDEHYDE REDUCTASE 10 348 - -
Cmo20g01091 349 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 10 348 - -
Cmo20g01091 349 Pfam Zinc-binding dehydrogenase 194 308 IPR013149 -
Cmo20g01091 349 SMART PKS_ER_names_mod 23 342 IPR020843 GO:0016491
Cmo20g01091 349 CDD CAD1 14 343 - -
Cmo20g01091 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 312 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo20g01091 Cmo-Chr20:10389642 Cmo02g00954 Cmo-Chr2:5842345 2.19E-17 dispersed
Cmo20g01090 Cmo-Chr20:10384192 Cmo20g01091 Cmo-Chr20:10389642 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo20g01091 K00083 - csv:101205228 571.237