Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g0022 ATGCCATCGGATCCGAACAATACGTTCCCTCTTCACCTTTTCTCAATCTTGATAAATGGCTTCGGATCCGAAGATTGCTGGCTTGTAATCTCTGGGAAGGTTTATGATGTAACTCCTTTCATGGAGGATCACCCCGGAGGTGATGAAGTATTATTGTCAGCAACTGGAAAAGATGCTACGAACGATTTCGAAGATGTTGGGCACAGCGATTCAGCAAGAGAAATGATGGACAAATATTACATTGGAGAAATTGATCCTTCAACAGTTCCTTTGAAGAAGATTTACATTCCATCACAACAAACGCAGTATAACCCAGATAAGACACCCGAGTTTGTGATTAAGATCTTGCAGTTTTTGGTTCCCATATTGATTTTGGGTTTGGCGTTTGCTGTTCGACACTACACCAAGAATGAATAA 417 41.01 MPSDPNNTFPLHLFSILINGFGSEDCWLVISGKVYDVTPFMEDHPGGDEVLLSATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLKKIYIPSQQTQYNPDKTPEFVIKILQFLVPILILGLAFAVRHYTKNE 138
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 180797 182736 - CmPI595203_01g000220.1 Cmu01g0022 405528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g0022 138 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 22 91 IPR036400 -
Cmu01g0022 138 SMART Cyt_b5_2 9 85 IPR001199 -
Cmu01g0022 138 Gene3D - 19 90 IPR036400 -
Cmu01g0022 138 Pfam Cytochrome b5-like Heme/Steroid binding domain 22 84 IPR001199 -
Cmu01g0022 138 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 24 85 IPR001199 -
Cmu01g0022 138 FunFam Cytochrome b5 type B 19 89 - -
Cmu01g0022 138 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 40 47 IPR018506 GO:0020037(InterPro)
Cmu01g0022 138 PRINTS Cytochrome B5 signature 44 58 IPR001199 -
Cmu01g0022 138 PRINTS Cytochrome B5 signature 34 44 IPR001199 -
Cmu01g0022 138 PRINTS Cytochrome B5 signature 72 84 IPR001199 -
Cmu01g0022 138 PRINTS Cytochrome B5 signature 59 66 IPR001199 -
Cmu01g0022 138 PANTHER CYTOCHROME B5 23 136 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0022 Cmu-Chr1:180797 Cmu05g0363 Cmu-Chr5:3084850 2.20E-47 dispersed
Cmu01g0022 Cmu-Chr1:180797 Cmu05g0058 Cmu-Chr5:650536 1.70E-31 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g0022 K23490 - csv:101207109 239.195