Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu01g0176 | ATGGCTGGCTCCTGGAGAGCTCGAGGATCTCTGATCGTTCTAGCAATTGTTTTCTTTGGAGGACTGTTCGCAATTTCCATTGCGAAAGAGGAAGCAACAAAATTGGGGACTGTCATTGGGATAGATTTGGGAACAACTTATTCTTGTGTTGGAGTCTACAAGAACGGACATGTAGAAATTATAGCGAATGATCAAGGGAACCGTATCACCCCTTCTTGGGTCGCTTTCACTGATAGTGAGAGATTGATCGGTGAGGCTGCGAAGAATCAAGCAGCTGTCAACCCTGAAAGGACAATCTTTGATGTCAAGAGACTTATCGGTAGAAAGTTTGATGACAAAGAGGTTCAGAAAGACATGAAGCTTGTTCCTTACAAGATTGTGAATAAGGACGGAAAGCCTTACATTCAAGTAAAGATCAAGGATGGTGAGACCAAGGTTTTCAGCCCTGAGGAAATCAGTGCTATGATTCTAACTAAGATGAAGGAAACAGCCGAAGCATTCCTTGGCAAGAAAATCAAGGACGCCGTGGTCACTGTTCCAGCTTACTTCAATGATGCCCAAAGGCAAGCAACCAAGGATGCTGGTATTATTGCTGGCCTCAACGTTGCTAGGATCATCAATGAGCCCACTGCGGCTGCCATTGCGTATGGTTTGGACAAGAAAGGTGGCGAGAAGAATATTCTCGTATTTGACCTTGGTGGTGGTACTTTTGATGTCAGTATCTTGACCATTGACAATGGTGTTTTTGAGGTTCTCGCCACAAACGGAGACACTCACTTGGGAGGTGAGGACTTTGACCAGAGAATTATGGAATACTTCATCAAATTGATTAAGAAGAAGCACGGAAAGGACATCAGCAAGGACAACAGAGCTCTTGGAAAGCTTAGGAGGGAATGTGAGCGTGCCAAGAGGGCATTGAGTAGCCAGCACCAGGTCCGCGTTGAGATTGAATCCCTCTTTGATGGCACTGATTTCTCTGAGCCATTGACCAGAGCTCGTTTTGAGGAGTTGAACAATGACTTGTTCAGAAAGACCATGGGACCAGTGAAGAAAGCCATGGAAGATGCAGGTTTGGAGAAGAACCAAATTGATGAGATTGTTCTTGTTGGTGGTAGCACCAGGATTCCCAAAGTTCAACAGCTCCTCAAGGACTACTTTGAAGGCAAAGAACCTAACAAGGGTGTGAACCCTGATGAGGCCGTTGCTTATGGTGCTGCTGTTCAAGGAAGCATCTTGAGTGGAGAAGGCGGTGAAGAGACTAAAGATATCCTTCTTCTTGACGTTGCCCCTCTTACCCTTGGAATTGAAACTGTTGGTGGAGTAATGACCAAGTTGATCCCCAGAAACACTGTCATCCCAACAAAGAAATCTCAGGTCTTCACCACTTACCAAGATCAGCAGACCACCGTCTCCATTCAGGTCTTCGAAGGTGAGAGGAGTCTCACTAAAGACTGCAGGAACCTTGGAAAGTTCGATCTAACTGGAATTCCTCCAGCACCAAGGGGTACCCCACAAATTGAGGTCACCTTTGAGGTTGATGCCAATGGTATCCTGAATGTTAAGGCCGAAGACAAGGGCACCGGTAAATCCGAGAAGATCACCATCACCAATGACAAGGGTCGGTTGAGCCAGGAGGAGATTGACCGAATGGTTCGTGAAGCCGAGGAGTTCGCTGAGGAGGATAAGAAGGTAAAGGAGAGGATTGACGCCCGTAACAGCCTGGAAACGTACATCTACAACATGAAAAACCAGATCAATGACAAGGACAAGCTTGCTGACAAGCTTGAATCTGATGAGAAGGAGAAGATCGAGACCGCCGTTAAGGATGCTCTCGAATGGCTCGATGACAACCAAAGCGCTGAGAAGGAAGACTATGAGGAGAAGCTCAAGGAGGTTGAGGCCGTCTGCAACCCCATCATCACCGCAGTCTACCAGAGGTCCGGTGGTGCTCCTGGCGGCGAATCGGCAGAAGATGATGAGTCTCACGATGAGCTTTGA | 1998 | 47.05 | MAGSWRARGSLIVLAIVFFGGLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFDDKEVQKDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRRECERAKRALSSQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFEGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRNLGKFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNSLETYIYNMKNQINDKDKLADKLESDEKEKIETAVKDALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGGESAEDDESHDEL | 665 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1751677 | 1754917 | + | CmPI595203_01g001760.1 | Cmu01g0176 | 405682 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu01g0176 | 665 | FunFam | Luminal-binding protein 5 | 571 | 646 | - | - | |
Cmu01g0176 | 665 | FunFam | Heat shock 70 kDa | 417 | 571 | - | - | |
Cmu01g0176 | 665 | PANTHER | HSC70CB, ISOFORM G-RELATED | 36 | 647 | IPR050451 | GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0006457(PANTHER) | |
Cmu01g0176 | 665 | Gene3D | - | 39 | 410 | - | - | |
Cmu01g0176 | 665 | SUPERFAMILY | Actin-like ATPase domain | 223 | 414 | IPR043129 | - | |
Cmu01g0176 | 665 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 417 | 570 | IPR029047 | - | |
Cmu01g0176 | 665 | MobiDBLite | consensus disorder prediction | 644 | 665 | - | - | |
Cmu01g0176 | 665 | Coils | Coil | 615 | 635 | - | - | |
Cmu01g0176 | 665 | Gene3D | - | 571 | 665 | IPR029048 | - | |
Cmu01g0176 | 665 | FunFam | Heat shock protein 70 | 39 | 226 | - | - | |
Cmu01g0176 | 665 | SUPERFAMILY | Actin-like ATPase domain | 36 | 220 | IPR043129 | - | |
Cmu01g0176 | 665 | CDD | HSPA5-like_NBD | 36 | 410 | IPR042050 | - | |
Cmu01g0176 | 665 | Gene3D | Actin; Chain A, domain 4 | 261 | 344 | - | - | |
Cmu01g0176 | 665 | Pfam | Hsp70 protein | 38 | 645 | IPR013126 | GO:0005524(InterPro)|GO:0140662(InterPro) | |
Cmu01g0176 | 665 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 569 | 652 | IPR029048 | - | |
Cmu01g0176 | 665 | Coils | Coil | 581 | 601 | - | - | |
Cmu01g0176 | 665 | FunFam | Endoplasmic reticulum chaperone BiP | 261 | 344 | - | - | |
Cmu01g0176 | 665 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 366 | 380 | IPR018181 | - | |
Cmu01g0176 | 665 | PRINTS | 70kDa heat shock protein signature | 65 | 77 | - | - | |
Cmu01g0176 | 665 | PRINTS | 70kDa heat shock protein signature | 503 | 519 | - | - | |
Cmu01g0176 | 665 | PRINTS | 70kDa heat shock protein signature | 175 | 195 | - | - | |
Cmu01g0176 | 665 | PRINTS | 70kDa heat shock protein signature | 363 | 379 | - | - | |
Cmu01g0176 | 665 | PRINTS | 70kDa heat shock protein signature | 395 | 415 | - | - | |
Cmu01g0176 | 665 | PRINTS | 70kDa heat shock protein signature | 235 | 245 | - | - | |
Cmu01g0176 | 665 | PRINTS | 70kDa heat shock protein signature | 37 | 50 | - | - | |
Cmu01g0176 | 665 | PRINTS | 70kDa heat shock protein signature | 422 | 441 | - | - | |
Cmu01g0176 | 665 | PRINTS | 70kDa heat shock protein signature | 87 | 95 | - | - | |
Cmu01g0176 | 665 | Coils | Coil | 285 | 305 | - | - | |
Cmu01g0176 | 665 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 41 | 48 | IPR018181 | - | |
Cmu01g0176 | 665 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 229 | 242 | IPR018181 | - | |
Cmu01g0176 | 665 | Coils | Coil | 547 | 567 | - | - | |
Cmu01g0176 | 665 | FunFam | Heat shock protein ssb1 | 100 | 155 | - | - | |
Cmu01g0176 | 665 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 418 | 575 | IPR029047 | - | |
Cmu01g0176 | 665 | Gene3D | - | 221 | 395 | - | - | |
Cmu01g0176 | 665 | FunFam | Chaperone protein HscA homolog | 227 | 275 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g0176 | Cmu-Chr1:1751677 | Cmu09g1908 | Cmu-Chr9:35153369 | 6.00E-231 | dispersed | |
Cmu01g0176 | Cmu-Chr1:1751677 | Cmu09g1914 | Cmu-Chr9:35190628 | 2.50E-229 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu01g0176 | K09490 | - | csv:101207505 | 1293.1 |