Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu01g0255 | ATGTTTCCTCAGCTTCTCATCAGCATTTCGCAGTTGTCTTTAACATTAGCCAAACTGAAATTGGAGCTGGTGGAGTGGTTAAATTTTCTGCTCCCCGATATAAATTTGCCACTGGATGCTTCAGATGAGGAATTGAGAGCATGCTTGATCGATGGAACTGTACTATGCAGCATGTTGGATAAACTATGCCCTGGCGCAGTTCAGGGAGGCAATTCTAAGCCCATCGTTCCTAATATTGAGAGTTTTCTAATAACTCTGGATGAATTAGCACTTCCTGGATTTGAACCTTCTGCCTTAGAGCAGGGATCTATTGCACCGGTTTTGCACTGCTTGAGCACACTTCGAGCTTCTTTTGATTTGAGTGTTGGGGATGAGTACACTCAAAATTATTCACGAAAAAAATGGAACTTATATGAAGTAGACTCATTAGATGGAATCCATAATTTATCCGGGCAAAGATTTCAAGATTTTCAGAATGGTTCGGTTGTATCAGTGCCATCAAATGGTTTAAACAGTCATATTCAATACGAGGATCATGAAGGGCAAGAACAAACTCTTGATGTTTCTGGTTCTAACATCTTGGAGTTGATAAAATCAAAAAATCTTGAGAATGTCTCTACTCAATCACTTTTCAATATGATCAATCGAATTCTGGATGGCAGTGTTGAAACAAAAAATGGAGATGTGTCACATCAAGTAGCTTATATTCTGAGAAAAGTTGTACAAGTGCTTGAGCAGAGGATTTTAACTCATGCTGGAAACCTGAGACATCAAAGCAATCTTTTGAAAGCTCGGGAGGAGAAATTTCTCTCAAAATTAAGAGTCCTTGAAACCCTTGCAACAGGGACCACGGAAGAAAATGAGGTTGTCATGAACCAGCTTCAGCGTTTGAAGATTGAAATGTTCAAAGTAGAGGAGATGAAAAACTGTGGGGAGCAGGATAAGATGGCGTTGAAGGAGCAAAAGGCACTCTGTGATGTCGAGCTTTCAAATCTTAAAGATGAGCTAGACAAAGTTAAAAGGGAACATGAAAATCATTGCTTACAACTGGAAACAAATGCTAAGGAGGAGAAAGCTAAGTTTGAGGAGAAACTAAATGAACTTGAATACTTATTAGCTGATTCCAGGAAGAACGCGAAGGAACTTGAGACATTTTCTGAATCTAAATCACTGAGATGGAAAAAGAAAGAGTTCGTCTATCAAAATTTTGTTGATGATCTGCTTCGAGCTTTTCAGGAATTAAGGATTTCAGTGGAGTCCATCAAACGTGAGGTCTTGAATACAAAAGGAAACTATGCTGAGGATTTTAATTTCCTTGGATCGAAGTTCAAAGGATTAGCAGACGTGGCTCAGAATTACCATGCAGTTCTGAACGAAAATAGAAGATTGTATAATGAAGTTCAGGATTTAAAAGGCAACATTCGAGTGTATTGTCGGATACGGCCATTCCTTCCAGGACAAAGCAAGAAGCTAACTACAGTTGAGTACATTGGTGAAAATGGTGAATTGGTGATTATAAATCCCGCTAAACAAGGAAAAGACAATCGTAGACTATTCAAATTCAATAAAGTTTTTGGTCCGACATGTTCACAAGAGGATGTGTTTTTAGACACTCAACCATTAATTCGATCTGTCCTCGATGGATATAATGTTTGCATATTTGCTTATGGACAAACTGGTTCAGGAAAGACCTATACTATGAGTGGACCTGATGTATCATTGAGAGCAGAATGGGGTGTTAACTATCGAGCATTAAATGACCTCTTTGAAATTTCTCAAAGCAGGAAGGGCTCTATTTCCTATGAAATTGGTGTCCAAATGGTTGAGATATACAATGAGCAAGTCCGTGATCTGCTCTCAACTAGCGTACCTGATGCCGGTATGCATCCTGTTAGATCTACTAGCGATGTCCTGGATTTGATGAAGATTGGATTGACAAACAGGGCAGTTGGAGCCACCGCCTTGAATGAAAGAAGCAGCAGATCTCATAGTGTGCTGACAATTCATGTTCGTGGTGTGGACTTGGAGACAGATGCTATCTTACGTGGTAGTCTTCATTTAATAGATCTTGCTGGTAGTGAAAGGGTGGACCGTTCAGAGGCGACTGGAGATAGGCTGAAGGAGGCACAACACATTAACAAATCATTGTCGGCACTTGGGGATGTAATTTTTGCTCTTGCACAGAAGAATTCGCACATACCTTACAGAAATAGCAAACTAACCCAAGTCCTCCAAAGTTCTTTAGGTGGTCAAGCAAAGACGCTCATGTTTGTACAGATTAATCCCGATGTAGAGTCATACTCTGAAACAATTAGCACCCTGAAGTTTGCAGAAAGAGTTTCTGGTGTAGAGTTGGGTGCTGCCCGCAGCAATAAAGAGGGTAGATATGTTAGAGAACTCATGGATCAGGTGGCCGTTCTCAAGGATACCATTGCAAATAAAGACGAGGAGATTGAGCGTTTGCAGTTGCTTAAAACTAATGGCAATGGTGTAAAGCATGGCGCTGGTTCCCTAAGATATGAGTCATTTTCTCCTAGAAGGTACTCTAGCACAACTCCTCGGCAGAGCCAAAAGCCATCAGGAAGAAAAGGCTTAGGGTTGGCGAATAAAGCAGCATCCGACATGGACAATTTCTCAGATTATGACAGGCGTTCTGAAGCTGGATCACTTCAGTCTATGGATGACTTTAGACATCATAAGCGTTCTGGATCTGGGTCACATCTGTTTATAGAAGACTTTAGACATAAGCGTTCTGGATCTGGATCACATCTGTCTGTAGAGGACTTTAAACATCAGAAGGAATCTTCTTCACAGTCAAGGGCTTTAAGTCAGAATGTTACTGATGATGTTGACCTTTTAGGCTTTGGAAATGCTGATTCTGACGAGAGATTAAGTGACATATCAGATGGTGGGCTTTCGATGGGAACTGAAACCGATGGATCAATTTGCAGTGTTGTGGAATATACTCTTTTCCCTGAAGTTCTAAAACCATCAGATGTTCCGTTTGCCGATACCAAATACCCGGAGAGCACATTGGATGTAAACAGGCCAGCAGAGACTGCAACAACTGGGGGGAAGTCATTGGTTCCTATTCCAGAAAAAACCAATGTATCATTGAAGTCAGGCCCCAGGCCCCCACAAAAGCCCGTGCAAGCAAAACCGTCAAGAGTTTCATTGACGAAAAGCTCCTCAAAGGCTCCATCAGCATCAAGTGCCAAAAAAACGATTGTTGGTAGCTCCTCGTCGATGAAAAGCCGCAAAAGGACTGATGGCCAATCTTCTCCTCTGCTGCAGCCTGCATTGGGCTTGAATTGTTTGACAGTAACTCAGAAGATGTCTTTGTTAGAACCTTGTAAATATCATTCCACATCATCAGTTTGGAGTCTACTAAATGGTGGTAGTGACATGTCAGCTAAATCCTGGAAAGGACAAGGCCTTACTAGTGTACGAATCTCACACGATATGGGTAAGATATATGGATGGATGAACTGTGTAAGTCATAGTGAAGCAGGCTACCCTGTGAAAGTTGCTAATACTGGAAGCATGAAAGCCAATGCATTCAAGGCTAGAGATGGTCTTCATGAAGCAGGGGTCTGCATTTCAGGAGCTTCAAGTTTTCTTGTTCATGAGTTGATTAATGAAACTTCAAGGAATACTCCTATGTTCCAATCAATTAATGTATCATCTTTTTTCATCCGAAAGTTGGAAATAAAAATGTTAGAAAATGTTTATATGGCTTCTCGTATCCTTATGATTGTTCAAGATAATAAGGCAGATGGCAGTCTAGTAGAGAGCCCAAATCCAGATATTTTGGCAGCTCATTCAGTACCTTCCGTAGATGGTGCATTAGACAATTTAGACTACAGGCGGAAGACTAATAGTAGTAGTGAACAACATGAGAATAAAACCAAAAAGTTGGACAAGCTCATTGTTGAAAATGAGTACAACAGAGAGAATTCCTCGTTGACCCGTGAAAAATCTTGTTACACTATTGCTAAGCAAGAACATGCCTTTGCAGGGGCGTTGGCTGGTGTATTTGTCAGTCTTTGTCTACATCCTGTTGATACAATCAAAACAGTGGTTCAGTCTTATCATGCAGAACAGAAGTCTCTCAGTTACATTGGAAAATCAATTGTCTCCGATCGAGGTTTAAGTGGACTTTATCGTGGAATCTCCACCAACATTGCTTCTTCAGCTCCGATATCTGCTGTTTACACTTTCACATATGAATCAGTTAAAGGAGCTTTGCTTCCACTTCTCCGAGAGATTTTTTTGGGGTCTTTACTCTTGCTCTCTCCCTCTCCAAGTAGAAGTTTGGAGTACGCTGAAGAGGAGTATCGCTCTATTGTCCACTGTATGGCTGGTGGTTGTGCAAGTATTGCTACATCTTTTCTTTTTACCCCAAGTGAGCGTATAAAACAGCAGATGCAAGTTAGTGCACACTACCATAACTGCTGGAATGCCTTTGTTGGTGTTGTTGCAAAGGGTGGATTGCGTGGATTATATACTGGGTGGGGAGCTGTTCTTTGCAGAAATGTACCACACTCAATTATCAAGTTCTATACATATGAAAGTTTGAAAGGATTGATGAAATCTAATGCTCAACAAACTACTTCACAAACGTTAGTATGTGGAGGAGTAGCTGGATCTACTGCCGCTTTGTTTACCACTCCTTTTGATGTTGTAAAGACCAGATTACAAACGCAAATACCAGGATCTCTGAGCCCATATAAAAGTGTAATTCAAGCACTCTATGAAATAGGCAAGAAAGAAGGTCTGAAAGGCCTTTATAGGGGCCTGACTCCAAGACTGATTATGTACATGTCTCAAGGTGCAATCTTCTTCTCCTCTTATGAATTTTTGAAGAGACTTTTTTCTCTCGAGTTGCCGAACATGATACTGCAAGAGTGCAACACCGACAAATGA | 4926 | 40.93 | MFPQLLISISQLSLTLAKLKLELVEWLNFLLPDINLPLDASDEELRACLIDGTVLCSMLDKLCPGAVQGGNSKPIVPNIESFLITLDELALPGFEPSALEQGSIAPVLHCLSTLRASFDLSVGDEYTQNYSRKKWNLYEVDSLDGIHNLSGQRFQDFQNGSVVSVPSNGLNSHIQYEDHEGQEQTLDVSGSNILELIKSKNLENVSTQSLFNMINRILDGSVETKNGDVSHQVAYILRKVVQVLEQRILTHAGNLRHQSNLLKAREEKFLSKLRVLETLATGTTEENEVVMNQLQRLKIEMFKVEEMKNCGEQDKMALKEQKALCDVELSNLKDELDKVKREHENHCLQLETNAKEEKAKFEEKLNELEYLLADSRKNAKELETFSESKSLRWKKKEFVYQNFVDDLLRAFQELRISVESIKREVLNTKGNYAEDFNFLGSKFKGLADVAQNYHAVLNENRRLYNEVQDLKGNIRVYCRIRPFLPGQSKKLTTVEYIGENGELVIINPAKQGKDNRRLFKFNKVFGPTCSQEDVFLDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDVSLRAEWGVNYRALNDLFEISQSRKGSISYEIGVQMVEIYNEQVRDLLSTSVPDAGMHPVRSTSDVLDLMKIGLTNRAVGATALNERSSRSHSVLTIHVRGVDLETDAILRGSLHLIDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKNSHIPYRNSKLTQVLQSSLGGQAKTLMFVQINPDVESYSETISTLKFAERVSGVELGAARSNKEGRYVRELMDQVAVLKDTIANKDEEIERLQLLKTNGNGVKHGAGSLRYESFSPRRYSSTTPRQSQKPSGRKGLGLANKAASDMDNFSDYDRRSEAGSLQSMDDFRHHKRSGSGSHLFIEDFRHKRSGSGSHLSVEDFKHQKESSSQSRALSQNVTDDVDLLGFGNADSDERLSDISDGGLSMGTETDGSICSVVEYTLFPEVLKPSDVPFADTKYPESTLDVNRPAETATTGGKSLVPIPEKTNVSLKSGPRPPQKPVQAKPSRVSLTKSSSKAPSASSAKKTIVGSSSSMKSRKRTDGQSSPLLQPALGLNCLTVTQKMSLLEPCKYHSTSSVWSLLNGGSDMSAKSWKGQGLTSVRISHDMGKIYGWMNCVSHSEAGYPVKVANTGSMKANAFKARDGLHEAGVCISGASSFLVHELINETSRNTPMFQSINVSSFFIRKLEIKMLENVYMASRILMIVQDNKADGSLVESPNPDILAAHSVPSVDGALDNLDYRRKTNSSSEQHENKTKKLDKLIVENEYNRENSSLTREKSCYTIAKQEHAFAGALAGVFVSLCLHPVDTIKTVVQSYHAEQKSLSYIGKSIVSDRGLSGLYRGISTNIASSAPISAVYTFTYESVKGALLPLLREIFLGSLLLLSPSPSRSLEYAEEEYRSIVHCMAGGCASIATSFLFTPSERIKQQMQVSAHYHNCWNAFVGVVAKGGLRGLYTGWGAVLCRNVPHSIIKFYTYESLKGLMKSNAQQTTSQTLVCGGVAGSTAALFTTPFDVVKTRLQTQIPGSLSPYKSVIQALYEIGKKEGLKGLYRGLTPRLIMYMSQGAIFFSSYEFLKRLFSLELPNMILQECNTDK | 1641 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 2544963 | 2564135 | + | CmPI595203_01g002550.1 | Cmu01g0255 | 405761 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu01g0255 | 1641 | FunFam | p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain | 415 | 623 | - | - | |
| Cmu01g0255 | 1641 | Coils | Coil | 404 | 424 | - | - | |
| Cmu01g0255 | 1641 | SUPERFAMILY | Mitochondrial carrier | 1335 | 1621 | IPR023395 | - | |
| Cmu01g0255 | 1641 | Gene3D | Kinesin motor domain | 416 | 785 | IPR036961 | - | |
| Cmu01g0255 | 1641 | Coils | Coil | 797 | 824 | - | - | |
| Cmu01g0255 | 1641 | Gene3D | Mitochondrial carrier domain | 1443 | 1635 | IPR023395 | - | |
| Cmu01g0255 | 1641 | Gene3D | Mitochondrial carrier domain | 1295 | 1435 | IPR023395 | - | |
| Cmu01g0255 | 1641 | MobiDBLite | consensus disorder prediction | 834 | 882 | - | - | |
| Cmu01g0255 | 1641 | ProSiteProfiles | Kinesin motor domain profile. | 473 | 783 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cmu01g0255 | 1641 | MobiDBLite | consensus disorder prediction | 953 | 972 | - | - | |
| Cmu01g0255 | 1641 | Pfam | Kinesin motor domain | 479 | 781 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cmu01g0255 | 1641 | SUPERFAMILY | Calponin-homology domain, CH-domain | 18 | 114 | IPR036872 | - | |
| Cmu01g0255 | 1641 | MobiDBLite | consensus disorder prediction | 920 | 945 | - | - | |
| Cmu01g0255 | 1641 | PRINTS | Kinesin heavy chain signature | 684 | 702 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cmu01g0255 | 1641 | PRINTS | Kinesin heavy chain signature | 548 | 569 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cmu01g0255 | 1641 | PRINTS | Kinesin heavy chain signature | 733 | 754 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cmu01g0255 | 1641 | PRINTS | Kinesin heavy chain signature | 653 | 670 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cmu01g0255 | 1641 | MobiDBLite | consensus disorder prediction | 920 | 935 | - | - | |
| Cmu01g0255 | 1641 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 1331 | 1415 | IPR018108 | - | |
| Cmu01g0255 | 1641 | Coils | Coil | 322 | 378 | - | - | |
| Cmu01g0255 | 1641 | Coils | Coil | 453 | 473 | - | - | |
| Cmu01g0255 | 1641 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 473 | 821 | IPR027417 | - | |
| Cmu01g0255 | 1641 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 1446 | 1529 | IPR018108 | - | |
| Cmu01g0255 | 1641 | ProSiteProfiles | Calponin homology (CH) domain profile. | 17 | 119 | IPR001715 | GO:0005515(InterPro) | |
| Cmu01g0255 | 1641 | MobiDBLite | consensus disorder prediction | 1007 | 1096 | - | - | |
| Cmu01g0255 | 1641 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 1536 | 1624 | IPR018108 | - | |
| Cmu01g0255 | 1641 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 22 | 1048 | IPR027640 | GO:0003777(InterPro)|GO:0007017(PANTHER)|GO:0007018(InterPro)|GO:0008017(PANTHER)|GO:0015630(PANTHER) | |
| Cmu01g0255 | 1641 | SMART | kinesin_4 | 471 | 791 | IPR001752 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro) | |
| Cmu01g0255 | 1641 | Gene3D | - | 14 | 119 | IPR036872 | - | |
| Cmu01g0255 | 1641 | FunFam | Kinesin-related protein3 | 624 | 825 | - | - | |
| Cmu01g0255 | 1641 | Pfam | Mitochondrial carrier protein | 1536 | 1626 | IPR018108 | - | |
| Cmu01g0255 | 1641 | Pfam | Mitochondrial carrier protein | 1447 | 1532 | IPR018108 | - | |
| Cmu01g0255 | 1641 | Pfam | Mitochondrial carrier protein | 1335 | 1416 | IPR018108 | - | |
| Cmu01g0255 | 1641 | ProSitePatterns | Kinesin motor domain signature. | 683 | 694 | IPR019821 | GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro) | |
| Cmu01g0255 | 1641 | MobiDBLite | consensus disorder prediction | 1053 | 1096 | - | - | |
| Cmu01g0255 | 1641 | MobiDBLite | consensus disorder prediction | 843 | 859 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu01g0255 | K27887 | - | - | csv:101218386 | 1885.15 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu01g0255 | Cmu-Chr1:2544963 | Cmu10g2404 | Cmu-Chr10:30515261 | 8.00E-192 | dispersed | |
| Cmu10g2930 | Cmu-Chr10:35637679 | Cmu01g0255 | Cmu-Chr1:2544963 | 4.40E-06 | dispersed | |
| Cmu01g0255 | Cmu-Chr1:2544963 | Cmu03g1116 | Cmu-Chr3:5552428 | 1.80E-79 | transposed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi2g321 | . | . | . | . | . | . | . | . | . | . | Cma02g01450 | . | Car02g01217 | . | . | . | Cpe05g00338 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cone8ag0303 | . | . | . | . | Csa05g00280 | Chy09g01229 | . | . | . | . | . | Bpe08g01484 | . | . | . | . | Cmo02g01486 | . | . | . | . | . | . | . | Bhi12g00262 | . | . | . | . | . | . | Cla01g00261 | Cam01g0267 | Cec01g0259 | Cco01g0274 | Clacu01g0266 | Cmu01g0255 | Cre09g2252 | Lsi09g00256 | . | . | Cme09g01764 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0002869 | 5 | 3 | 4 | 3 | 3 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 3 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 5 | 1 | 2 | 54 |