Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu01g0357 | ATGGAACAACCAACCTCCAATTCTCCTCTACTTCTCATAAATTCCCTCAATTCCTCAGTTGACCAATCTCCTTTCCTCTTCACCTTCGTCGCCGCTCTTCTAATAATTTTCCTCTATGTAAAACTCACGCGCCAGCGCGTGCCTCTTCCACCTGGTCCCTGGGGCGTTCCACTACTCGGAAACCTCCCATTTCTTGACCCCGATCTTCACACGTACTTTGCCGAATTAGGCCGAAAATATGGTCCAATAGTAAAGCTCCAACTCGGCAATAGAATTGGTATAATCGTAAATTCACCTTCGGTAGCACGTGAAGTGTTGAAAGACCACGATGTTACATTTGCAAATCGCGATGTTCCTCAAGCCGGGAGAGCTGCCTCGTACGGCGGTTCTGACATAGTTTGGACACCGTACGGACCCGAGTGGCGAATGTTGAGAAAAGTTTGTGTGTTAAAGATGCTGAGCAACGCCACTTTGGATAGCGTTTACGAGCTCCGCCGTAGAGAGGTGAGAAACACGGTGGCTCACTTGTACCGGCGATGTGGGTCAGCAGTGAACGTGGGAGAGCAGGGGTTTTTGACGGTTTTCAACGTGGTTACAAGCATGTTGTGGGGTGGTTCAGTGGAAGGAGAGCAGAGGGATGGTCTTGCAGCGGAGTTTAGAGAGACAATTTCGGAAATAACAGAGCTATTGGGAAAGCCTAATATTTCGGACTTTTTTCCAAGCTTGGCCCGTTTTGATCTCCAAGGGATTGAGAAGAAGATGCGTGAGATTGCTCCGAGATTTGATAACATTTTCGAAAAGATGATAGATGAACGATTGAAAATTGGTGGTGGAGATGACGACGGGAGTGTCAAGAAAAATGATTTCTTGCAGTTCTTACTTGAAGTTAAAGATGAAGGAGAATCCAAGACTCCTCTCACCATCACCCACCTTAAAGCCTTGCTCATGGATATGGTGGTCGGAGGGACAGACACATCGTCAAATACCATAGAATTTGCGTTGGCAGAAATGATAAAGAACCCAAAAACGCTAAAGAAAGCACAAGAAGAACTCACCGCTGTGGTCGGAGAAGACAACATCGTCGAAGAGTCCCACATTCACAGTTTCCCATATCTGAAGGCCGTAATGAAAGAAACTTTACGTTTACACCCAATTCTACCTCTGCTCGTGCCGCACTGTCCAAGCGAGACCACCATCGTCTCCAATTACGCAATTCCAAAGGGCTCTCGAGTGTTCATCAATGCTTGGGCCATTCAGCGAGACCCCAATCATTGGGAAAATCCATTGGTGTTTGATCCAGAGAGGTTTCTCAAGACCGAGAAGTGGGATTTTGGTGGGAGTGATTTTCGTTACTTCCCATTCGGGTCAGGCAGAAGAAACTGTGCAGGGATAGCCATGGCGGAAAGAATGGTAATGTATTTACTTGCTACGCTTTTGCATTCTTTTGACTGGAAATTGGAAGATGGTAAGAAGATGGAAGTTGAGGAGAAATTTGGGATTGTTTTGAAGATGAAGTCGCCTCTTGTTCTCATTCCAACGCCAAGGCTATCTAATCCAACTTTGTATCAATAA | 1572 | 46.12 | MEQPTSNSPLLLINSLNSSVDQSPFLFTFVAALLIIFLYVKLTRQRVPLPPGPWGVPLLGNLPFLDPDLHTYFAELGRKYGPIVKLQLGNRIGIIVNSPSVAREVLKDHDVTFANRDVPQAGRAASYGGSDIVWTPYGPEWRMLRKVCVLKMLSNATLDSVYELRRREVRNTVAHLYRRCGSAVNVGEQGFLTVFNVVTSMLWGGSVEGEQRDGLAAEFRETISEITELLGKPNISDFFPSLARFDLQGIEKKMREIAPRFDNIFEKMIDERLKIGGGDDDGSVKKNDFLQFLLEVKDEGESKTPLTITHLKALLMDMVVGGTDTSSNTIEFALAEMIKNPKTLKKAQEELTAVVGEDNIVEESHIHSFPYLKAVMKETLRLHPILPLLVPHCPSETTIVSNYAIPKGSRVFINAWAIQRDPNHWENPLVFDPERFLKTEKWDFGGSDFRYFPFGSGRRNCAGIAMAERMVMYLLATLLHSFDWKLEDGKKMEVEEKFGIVLKMKSPLVLIPTPRLSNPTLYQ | 523 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 3742656 | 3745696 | - | CmPI595203_01g003570.1 | Cmu01g0357 | 405863 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu01g0357 | 523 | PRINTS | E-class P450 group I signature | 101 | 122 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | PRINTS | E-class P450 group I signature | 414 | 438 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | PRINTS | E-class P450 group I signature | 330 | 356 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | PRINTS | E-class P450 group I signature | 373 | 391 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | PRINTS | E-class P450 group I signature | 77 | 96 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | PRINTS | E-class P450 group I signature | 193 | 211 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | PRINTS | E-class P450 group I signature | 310 | 327 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | Gene3D | Cytochrome P450 | 38 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | PRINTS | P450 superfamily signature | 461 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | PRINTS | P450 superfamily signature | 321 | 338 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | PRINTS | P450 superfamily signature | 374 | 385 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | SUPERFAMILY | Cytochrome P450 | 50 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cmu01g0357 | 523 | Pfam | Cytochrome P450 | 50 | 507 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu01g0357 | 523 | CDD | CYP76-like | 78 | 512 | - | - | |
| Cmu01g0357 | 523 | FunFam | Cytochrome P450 - like protein | 39 | 509 | - | - | |
| Cmu01g0357 | 523 | PANTHER | OS08G0547900 PROTEIN | 25 | 523 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu01g0357 | Cmu-Chr1:3742656 | Cmu01g0359 | Cmu-Chr1:3750694 | 3.30E-232 | dispersed | |
| Cmu01g0354 | Cmu-Chr1:3731904 | Cmu01g0357 | Cmu-Chr1:3742656 | 4.00E-11 | proximal | |
| Cmu01g0355 | Cmu-Chr1:3733650 | Cmu01g0357 | Cmu-Chr1:3742656 | 2.10E-46 | proximal | |
| Cmu01g0356 | Cmu-Chr1:3740152 | Cmu01g0357 | Cmu-Chr1:3742656 | 1.90E-43 | tandem | |
| Cmu01g0357 | Cmu-Chr1:3742656 | Cmu01g0358 | Cmu-Chr1:3748798 | 4.50E-88 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu01g0357 | - | - | - | 0.0 |