Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g0401 ATGATGATGGGAGGAATGGAAGATGCGGTGGTGATCGGAGGATTGATGGCGGTGCAGTTCATTTACGCCGGAAATTCGGTGTTGTTGAGTTATTTGATGTCGTTTGGGCTTAATCCGTTCACCATCGTCGTTTGTTTTGCCTCTACAACTTCTCTGTTTCTCTCTCCTCTCGCTGTTTATTTTGAAAGGAGCACATGGCCCAAAAAATTGAGTTTTAAGTTGACGCTTCAACTTGTCCTCATCTCCTTTGGCGGAGTAACTTTGTTCCAAACTCTGCTATTAGAAGGGATAAAGTTGACCTCCCCAGCCATGGCTACTGCCATGCCAAATCTGGCTCCTGGTCTCATCTTTATCACTGCTTGGTGTTGTAGATTAGAGAGAGTGAAACTTAGTTGTGTGTACAGCAAAGTAAAGATTTTGGGGACATTGCTTTGTGTAGTAGGTGCTCTAACAATGAGCATAATGCAAAGCACTATTACAATACCAGCAAAAGATCAACTAATTACAACATCTCAACCTACCATTGTACTCTTCAATAAGGAAAAGATTGTTGGTTGTTTGTACTTAATGCTGGCTGTCTTCATACTATCAACCAATGTTGTTTTGCAGGCAAAAGCCCTTGGTGAATTACCAGCTCCAATGTCATTGAGTGCTGTAACATCCTTCATTGGAGTGTTCACCACTGCAGCTGTAATGCTACTCCAAAATCACAACTTACAAACAGATTGGTCAATTCTCAACATCAAGGATTTACTTTCCTATTCTCTTTTTGGAGGAATAGTGAGTGGCATAAGCTTGAGCTTCAATGGATGGGCAATGAAGAAGAGAGGCCCAGTTTTGGTGTCAATTTTCAGTCCCATTGGAACTGTTTTCTCTCTCATTCTCTCTGTCTTCACCTTAGGAGACACTATTTCTATTGGAAGCCTTGCTGGTATGTTCTTGATGTTCTGTGGGCTCTACTTTGTGCTTTGGGCAAAAGGAAAAGAAGGTTATTGTGATGGAAGTGGCTATCAAAGTGATGACTTTGATCTTGAGAAACCTTTACTCTCTTGA 1053 41.5 MMMGGMEDAVVIGGLMAVQFIYAGNSVLLSYLMSFGLNPFTIVVCFASTTSLFLSPLAVYFERSTWPKKLSFKLTLQLVLISFGGVTLFQTLLLEGIKLTSPAMATAMPNLAPGLIFITAWCCRLERVKLSCVYSKVKILGTLLCVVGALTMSIMQSTITIPAKDQLITTSQPTIVLFNKEKIVGCLYLMLAVFILSTNVVLQAKALGELPAPMSLSAVTSFIGVFTTAAVMLLQNHNLQTDWSILNIKDLLSYSLFGGIVSGISLSFNGWAMKKRGPVLVSIFSPIGTVFSLILSVFTLGDTISIGSLAGMFLMFCGLYFVLWAKGKEGYCDGSGYQSDDFDLEKPLLS 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4201932 4208961 - CmPI595203_01g004010.1 Cmu01g0401 405907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g0401 350 PANTHER WAT1-RELATED PROTEIN 16 330 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cmu01g0401 350 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020(InterPro)
Cmu01g0401 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 327 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0401 Cmu-Chr1:4201932 Cmu02g1471 Cmu-Chr2:28480547 5.50E-34 dispersed
Cmu01g0401 Cmu-Chr1:4201932 Cmu10g1098 Cmu-Chr10:3277934 3.10E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g0401 - - - 0.0