Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g0450 ATGCTCAAACTAATTCTTCTCGTTGCTTCGGCCACCATTTTCCTCCTTCTCCTAATTTCCATCTTCATTTTTCGCCTTAAACTCTCTAAAAATCACCACATCCACAACCCTTCCCCCAATAAGAACAAGAAAACAGAGCACACGCCGCCGGAGCTCACCACTTTTGAGGGCGGCGAAGATTTGACGATCGACGAAATTCTAGAAGCTCCTGGGGAAGTGATCGGAAAATCCCATTATGGAACACTGTATAAGGCTACGTTACAGAGCACCCAAACCACCCGGCTACTCAGATTCCTCCGCCCGGCCGCTGGCGGAGGAGACCATAATGACGACGTCGTTCGGTTTCTGGGTTCGATTCGGCACCGGAATTTGGTCCCGTTGCTGGGATTCTACGCCGGCGGGAGGGGCGAGAAGCTTCTGATTCATCCGTTCTACGAGCAGGGGAATTTGGCGGAGTTCATTAGAGGTGAAACAGAATCAAAAAATTGGGAGGTCATTTACAAAATCTCCATCGGAATCGCAAAAGCCCTGCATCATCTTCACAACGGATTGCAAAAACCAATCCCTCACGGAAATCTCAACTCCAACAACATTCTTCTCGATCAAAATCTCCATCCGCACGTCTCCGATTTCGGCCTCCATCTCCTCCTCAACGCCGCCGCAACTCGAGAAATGCTCCACGTTTCAGCCGCCGCTGGCTACAAAGCGCCGGAACTTATCAAAATGACCGACGCTGATGAACGCACCGACGTCTACAGCTACGGCAAGATCTTACTCGAGTTGCTCTCTGCCAAAGAGCCCACGATTCGAAATCCGGTTGCTACCGACGATTCCGGCGTTTCTGAAAATCGGATTCTCCGATGCATTCTTCAGATCGGCGAGGTTTGTTGTCGTTCTTCGCCGAATCTTCGGCCGGATTTCAAACAAGTGATTGCTAAGATCGAAGAAATCGGAAGGATTGAGATGGATTAA 972 49.9 MLKLILLVASATIFLLLLISIFIFRLKLSKNHHIHNPSPNKNKKTEHTPPELTTFEGGEDLTIDEILEAPGEVIGKSHYGTLYKATLQSTQTTRLLRFLRPAAGGGDHNDDVVRFLGSIRHRNLVPLLGFYAGGRGEKLLIHPFYEQGNLAEFIRGETESKNWEVIYKISIGIAKALHHLHNGLQKPIPHGNLNSNNILLDQNLHPHVSDFGLHLLLNAAATREMLHVSAAAGYKAPELIKMTDADERTDVYSYGKILLELLSAKEPTIRNPVATDDSGVSENRILRCILQIGEVCCRSSPNLRPDFKQVIAKIEEIGRIEMD 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4674300 4677849 - CmPI595203_01g004500.1 Cmu01g0450 405956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g0450 323 SUPERFAMILY Protein kinase-like (PK-like) 71 315 IPR011009 -
Cmu01g0450 323 Gene3D Transferase(Phosphotransferase) domain 1 62 323 - -
Cmu01g0450 323 ProSiteProfiles Protein kinase domain profile. 68 317 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu01g0450 323 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 4 318 IPR052451 -
Cmu01g0450 323 Pfam Protein tyrosine and serine/threonine kinase 72 313 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0450 Cmu-Chr1:4674300 Cmu09g0886 Cmu-Chr9:8665146 8.40E-45 dispersed
Cmu01g0450 Cmu-Chr1:4674300 Cmu05g0251 Cmu-Chr5:2137975 4.30E-25 wgd
Cmu01g0450 Cmu-Chr1:4674300 Cmu07g1658 Cmu-Chr7:31905568 4.10E-84 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75189 PF07714 PK_Tyr_Ser-Thr 1.50E-26 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g0450 - - - 0.0