Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g0465 ATGGGTTTCGACAAAGCACTGGCGCCCTATATTCTCCTCGCCGCCATGATGATCCTCGTGGGGCCAACCACGGCGCAGTTGAGCCCGACGTTCTACGACACCACATGCCCTAACTTATCCTCCATTGTAGAAGATGTAGTTAGACAAGCTCTCCAAACCGATGCCCGAGCAGGCGCAAAACTCATTCGCTTTCATTTTCACGACTGTTTTGTCAATGGTTGTGATGGATCTGTCCTATTGGAAGATTCAGTTGAAGACAACATAGATAGTGAGCAAAACGCTCCGGGAAATGAAGGAATACAAGGCCAAAATATTGTTGCTGACATCAAGACTGCAGTTGAAAATGTTTGTCCAAACCTAGTCTCCTGTGCTGACATCTTAGCCATTGCATCTAATTCAGCTGTCGTCTTGGCCGGAGGTAGGGGTTGGGAGGTTCAACTAGGAAGAAGAGATAGTCTAATAGCAAATAGATCTGGAGCTGAAAGTAATCTTCCAAGTCCTTTTGAACCACTTGCAAATCTTACCGTCAAGTTTGCAAATGTTGGTCTTGATTCTACTGACCTTGTCGTTTTATCCGGAGCGCACACGTTCGGTCGTTCAAGATGCCAATTCTTCCAACGGCGATTGAACGACTTCAACGGAACAGGAATGCCTGATTCGAGTCTAGACCCAATATACAGAGACGTTCTTTTGGAGGCATGTCCTGAAGGCGGAGACAACAATCGGGTAAACTTGGATCCGACAACTCCAGACGCATTCGACAACAATTATTTCACCAATCTCCAAGGAAACCGTGGGCTTCTTACCAGCGACCAAGTGCTGTTCTCCCCTGCCGGCGCCGCCACCGCCGGCGATGTGGACCGGTTCGCCGCCAGCCAAGATGTGTTCTTTGATGCCTTTGGAGCCTCCATGATTAAGATGGGAAATATTAGGCCTTTGACTGCAAATGATGGGGAGATTCGTTTGACTTGTTCTAGGATTAATCCTTTGCCTACTCTTGCTGATATGTAA 1011 47.58 MGFDKALAPYILLAAMMILVGPTTAQLSPTFYDTTCPNLSSIVEDVVRQALQTDARAGAKLIRFHFHDCFVNGCDGSVLLEDSVEDNIDSEQNAPGNEGIQGQNIVADIKTAVENVCPNLVSCADILAIASNSAVVLAGGRGWEVQLGRRDSLIANRSGAESNLPSPFEPLANLTVKFANVGLDSTDLVVLSGAHTFGRSRCQFFQRRLNDFNGTGMPDSSLDPIYRDVLLEACPEGGDNNRVNLDPTTPDAFDNNYFTNLQGNRGLLTSDQVLFSPAGAATAGDVDRFAASQDVFFDAFGASMIKMGNIRPLTANDGEIRLTCSRINPLPTLADM 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4782827 4786254 + CmPI595203_01g004650.1 Cmu01g0465 405971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g0465 336 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 PANTHER PEROXIDASE 72-RELATED 16 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 Gene3D Peroxidase, domain 2 165 307 - -
Cmu01g0465 336 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 FunFam Peroxidase 30 173 - -
Cmu01g0465 336 Pfam Peroxidase 43 291 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Cmu01g0465 336 FunFam Peroxidase 165 307 - -
Cmu01g0465 336 SUPERFAMILY Heme-dependent peroxidases 26 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu01g0465 336 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g0465 336 Gene3D - 31 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0465 Cmu-Chr1:4782827 Cmu02g2351 Cmu-Chr2:37032128 6.80E-114 dispersed
Cmu01g0465 Cmu-Chr1:4782827 Cmu11g0585 Cmu-Chr11:6426450 3.00E-77 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g0465 K00430 - csv:101215530 585.104