Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g0492 ATGATGGAGAATATGAGATGTTCAATATTTAGAGGTATTGCAAGTGATTTCCGAGGAAGAGCTTCTTGTTATAAACAAGATTGGATTGGTGGCCTACGTTCAGGAATCGGGATTTTGGCGCCAACTACGTACATCTTTTTTGCTTCCGCGCTGCCCGTCATTGCTTTTGGCGAGCAATTGAGTAGGAACACAGATGGAAGCTTAAGCGCAGTTGAAACTTTGGCTTCTACAGCCATTTGTGGGATTCTTCACTCCATTTTTGGTGGCCAACCTCTTCTTATTGTAGGAGTTGCTGAACCCACCATTGTTATGTACACTTATTTGTTCAACTTTGCAAAAGATAGGAAAGATTTGGGAAGAGAACTCTTCCTTGCTTGGGTTGGATGGGTTTCCGTGTGGACGGCTATGTTATTGATGCTTTTGGCAATATTCAATGCTTGTAGTCTAATCAACAGATTTACAAGAATTGCAGGAGAACTTTTTGCCATTTTGATTTCTACTTTGTTCATTCAAGAAGCTATCAAGGGAGTTGTAAGTGAGTTTAAAATTCCCAAAGCAGAGAATCCAAATATGGAGAGATATGATTTTCATTGGCTTTACACAAATGGATTGCTTGGAATCATATTTACTTTTGGAGTTTCATATTCTTCTTTGAAGAGCAGAAAGGCAAGGTCATGGTTATATGCCACAGGGTGGTTGAGAAGCTTCATTGCAGACTATGGAGTTCCTCTCATGGTTGTAGTATGGACTGCATTATCATTCAGTGTCCCAACAAAAATTCCTTCTGGAGTTCCTAGAAGACTTGTAAGCCCTTTGCCATGGGAATCTGCTTCTTTGTACCATTGGACTGTGGTCAAGGATATGGGGAAAATCCCACCCTCATACATATTTGCAGCTCTTCTCCCTGATGTGATGATTGCAGGCCTTTACTTTTTTGATCATAGTGTTGCTTCTCAATTGGCACAACAAAAGGAGTTTAATCTTAAGAATCCTTCGGCGTATCACTATGACATCTTCTTGCTTGGTTTTATGACTTTACTTTGTGGATTACTTGGGCTTCCTCCCTCAAATGGGGTTTTACCACAGTCTCCAATGCATACTAAAAGCCTTGCAGTTCTTAAGAGGCAGTTGATAAGAAAAAAGATGGTTGAAAGTGCTAAGGAAAGCATAAAAAAGAAAGCTACAAACTCAGAAATCTATGTCCAAATGCAAGATGTGTTCATAGAAATGGATGGTAGCCCAGCTGTTAGTCCACTAGAGATGGATGTAGTGGTGAAAGAATTGGAAGATTTGAAGGAAGCAGTTATGAAAGAAAACAACAACAAAGAAAATGAAAATGAAGAAGAGAAATTTGGTCATCTTGAGAAGCACATTGATTCATATCTTCCAGTTAGAGTAAATGAGCAAAGAGTGAGTAATCTGCTACAGTCAGTCCTAGTGGCTTCATTAATTTTTGCAATACCATTGGTCAAGAAGATCCCAACATCTGTGCTTTGGGGATATTTTGCTTATATGGCCATTGATAGTCTTCCTGGAAACCAATTTTGGGAAAGGATTTTGCTCCTCTTCGTCATGCCTAGTCGACGTTACAAGGTGCTAGAAAATGCTCATGCTTCCTTTGTGGAGTTGGTGCCATTCAAATACATAACCATATTCACTCTCTTTCAACTTGTGTATCTTCTTCTTTGCTATGGAGTGACTTGGATCCCTATAGCTGGAGTCTTGTTTCCCTTACCTTTCTTCTTCCTCATTACCATAAGACAACACATTCTTCCCAAAGTACTCCGATCTCGATATTTGCGAGAGCTCGATGCAGCGGAATATGAAGAAATAAAGGGATCTCCGAAGACCTCGCTTAGTTTTTCTTTCAAGGGAAAGGATTCTACTCATATAGTTGAAGGTGGAGATGAGGTTGAAATGTGTGATGCTGAAATTCTAGATGTGTTGACAACCAATAGAGGGGAGTTGAAGATTAGAACAAGAAGCTTTAATGAAGATGGACATGGTCAGGTTTACCCTGAAATAGTTGAAATAGAATGA 2040 39.66 MMENMRCSIFRGIASDFRGRASCYKQDWIGGLRSGIGILAPTTYIFFASALPVIAFGEQLSRNTDGSLSAVETLASTAICGILHSIFGGQPLLIVGVAEPTIVMYTYLFNFAKDRKDLGRELFLAWVGWVSVWTAMLLMLLAIFNACSLINRFTRIAGELFAILISTLFIQEAIKGVVSEFKIPKAENPNMERYDFHWLYTNGLLGIIFTFGVSYSSLKSRKARSWLYATGWLRSFIADYGVPLMVVVWTALSFSVPTKIPSGVPRRLVSPLPWESASLYHWTVVKDMGKIPPSYIFAALLPDVMIAGLYFFDHSVASQLAQQKEFNLKNPSAYHYDIFLLGFMTLLCGLLGLPPSNGVLPQSPMHTKSLAVLKRQLIRKKMVESAKESIKKKATNSEIYVQMQDVFIEMDGSPAVSPLEMDVVVKELEDLKEAVMKENNNKENENEEEKFGHLEKHIDSYLPVRVNEQRVSNLLQSVLVASLIFAIPLVKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVMPSRRYKVLENAHASFVELVPFKYITIFTLFQLVYLLLCYGVTWIPIAGVLFPLPFFFLITIRQHILPKVLRSRYLRELDAAEYEEIKGSPKTSLSFSFKGKDSTHIVEGGDEVEMCDAEILDVLTTNRGELKIRTRSFNEDGHGQVYPEIVEIE 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5048089 5062451 - CmPI595203_01g004920.1 Cmu01g0492 405998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g0492 679 PANTHER ANION EXCHANGE PROTEIN 9 652 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Cmu01g0492 679 FunFam probable boron transporter 2 20 62 - -
Cmu01g0492 679 Coils Coil 421 448 - -
Cmu01g0492 679 Pfam HCO3- transporter integral membrane domain 204 376 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cmu01g0492 679 Pfam HCO3- transporter integral membrane domain 464 606 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cmu01g0492 679 Pfam HCO3- transporter integral membrane domain 9 186 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cmu01g0492 679 Gene3D Helical hairpin bin 20 62 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0492 Cmu-Chr1:5048089 Cmu08g1246 Cmu-Chr8:24825907 9.70E-261 dispersed
Cmu01g0492 Cmu-Chr1:5048089 Cmu07g1265 Cmu-Chr7:27922302 8.10E-300 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g0492 K24194 - csv:101210964 1005.36