Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g0495 ATGACTAATGTTCGAAATGATCCAATTTTAAAAATGGAAACAACATGTGGAACACTTCTACACGAACTTCAGATCATTTGGGATGAAGTAGGGGAATCTGAGGCCACAAGGGACAAAATGTTGCTTGAGGTTGAACAAGAGTGCTTAGAAGTTTACAGAAGAAAGGTAGATCAAGCAAACCGCTTTAGAGCTCAGCTAAGGCAGGCAATTGCCGATTCTGAAGCAGAATTGGCTGCCATCTGCTCTGCAATGGGAGAGAGACCAGTACATACGAGGCAGGCTGATCAAAAGACTGGAACCTTGAGAGAAGAGATGGCCCGTGTTCTTCCACAAGTGGATGAAATGCGGAAAAGAAAAGTAGACAGAAGAAATCAAATTTTAGAAGTCCTAGAACAAATACAGAAGATATCCTATGAGATTTATGGATCAAAATTTTCACATTCCAGTGTAGCTATTGATGAAAATGATTTATCATTGAGGAAGCTAGAAGAATTGCAAGGACAGTTACATACGCTACAGAAGGAGAAGAGTGACAGGCAGATGGTTGTTCAGGAGCACCTTCAGACTCTAAACTTGCTTTGTTCAGTGCTTGGGATGGATTTCAAGCAAACAGTGAATGGATTTCATCCTAATTTGGGTGACCCAGATGGAACTTTTAACATAACTAGTGAATCAATTGAAACCCTGGCTGCTGCAATAATTAATTTGCGCGAGGTCAAATTACGAAGAATGCAGCGGCTCCAAGATCTTGCTACAACTTTGTTGGAGCTTTGGAATCTAATGGATACACCAATGGAAGAACAACAGTTGTTCCAAAACGTGACATGTAATATAGCTGCTTCAGAAGATGAAGTAAACGAACCCAATAGTCTCTCTGTGGACTCAATTAATTCTGTTGAAGCAGAAGTGTCTCGGTTAGAAGAGTTAAAATCAAGCAAGATGAAAGAACTTGTTTTGAAGAAGAGGTCAGAGCTGGATGAGATTTGTAGAAAAACGCATTTAGTCCTGGAAGAAGATACAATAGTGGAATATGCAATTGAAACTATCGACTCTGGAGATGTTGACTCTGCCATTATTCTTGAGCAAATTGAGCTTCAGATTGCCAGGATTAAAGAGGAAGCATTTGTCAGGAAAGAAATTCTTGAAAAAGTTGAGAAATGGTTGACTGCCTGTGATGAGGAGTGTTGGCTGGAGGAGTATAATAGGGATGAAAATAGATATAATGCTGGTAGAGGGGCACATCTCATTCTCAAACGCGCAGAGAAGGCCCGAGCTTTGGTTAATAAGCTTCCAGGAATGGTGGATGCATTAACTTCAAAAACAATGGCATGGGAGAAGGAAAGAGGGATTGAGTTTACATACGATGGAGTCAGTCTGCTCAGTATGCTTGAAGAGTATTCTGTATTAAGGCAAGAGAAAGAGCAGGAGCGTCGCAGGCTGCGGGACCAGAAGAAACTCCAGGGACAGTTAATAGCAGAACAGGAGGCTCTTTATGGATCGAAGCCAAGCCCCTCAAAACCCCAGAGTGTTAAAAAAGCTTCCAGAGCTTCAGCTGCAGGTGCAAATAGTAAAAGGCTTTCTCTTGGAGGGACGTTGCACCAAACGCCCAAGCCTGATCCAATTCACAAGGCAACACCTCAGTCACGTCCGTCTAGGAAAGGTGACCACCTGAATGATCAAAACTATGATGAAGGATTTGGAGCTCTTCCAATTGCTGGCCGAAGAGAACTTGATTTTTCTGGTCAACCTCCGAGCCACAATAACTCGCTTGCCAATGCTCGTGAACAACCTGAGTTGGGGATTCGGAAACCTTTTGCACCAATTGCTACCACAGTCCAACCAAAGACGAACACAACGAACTCAATCAATGATGCAAACACAGCATCTAGTGAACCGTTGCAAAAAACAAGCCCAACTAGCAATGTGCCATTTACACCTTTGAAAAAGATCTCAGTTGCTACTGATGAAGACCAAAACATGACTCCAAAGGCAATGTCAATTCCAGTACCATCTACCCCTTCAACTCTATCAGTTGCAATGCAGACCACTACAACTCCGGCAGTTGCCCTGCCTCCTCCCGCTTTCAAAGCTGAGGAAATTCCTGAAGACAACGTTGAATATTCGTTCGAGGAAAGAAGAGCCGGGTTCTGGATTTCGTCTCATTTTAATTGGCTCTGTTTTTGTGTTCTTGTTTCATTGTCTTCTTCATTGAGAGCTTCTTCTTGTTGTTGTGGTTTGTTAAGTATCGTCTGTAGAGTGAATAATGGAGGTTTAGGGTTTAAGGTGTCGGTTTACCGTTTATGTACTTTTGCTTTAGAACACATCTTTTTCTTTTCTGTCACTGTAAAAATGGAAGAGAAAGAGGGAGGAGTGGATTTCGGGTTTGCAGTAAAAGTGAGCCAAGCTCCAGAGAGCTTCGGGATGATGGATTCGAGACCTGAAAATTCAAGCACAGATGGTGACACGCCGCCGCCGCAGCCGCCGGCGAGTGTTCCGACGGCGGGGGCTACAGATGGAAAGAAGAGAAGAGGGAGACCGAGAAAGTACGGTCCCGATGGGACTGTAGCTCCAACATTGTCACCAATGCCGATTTCGTCATCGATTCCACTGACCGGAGAATTTCCGGGTTGGAAACGGGGAAGAGGGCGGTCAGTAGAGTCGATTAAGAAGTCGCGGAAGTTCGAGTATGAGATTCCAGGTAACAAGGTTGCCTTCTTTGCTGGAGCAGATTTCACACCTCACGTGATCACTGTTAATATTGGTGAGGATGTTAACTTGAAAGTTATGTCATTTTCTCAACAAGGATCTCGGGCGATTTGTATACTCTCTGCTAATGGTATGGTTTCAAATGTTACACTTCGGCAGTCAACATCTTCTGGGGGTACTTTGACATATGAGGGTCGATTTGAGATACTTTCATTGTCTGGATCATATATGCCTTCTGAGATTGGTGGAACAAAGAGCCGATCTGGAGGGATGAGTGTCTCTTTGGCTGGCCCAGATGGCCGGGTGATGGGTGGTGGACTTGCCGGCATGCTGATAGCAGCTGGTCCAGTGCAGGTGGTGGTGGGTAGTTTCCTGCCACCAGGTCACCAGCAGGAAAACAAACCAAAGAAGAATAGGATGGAGCCTACATCGAACACAAATTTGCCTCCAGCCAATGTTCTTTCTGGCGAAGGGACAAAGGAAGTACTTGGAGGAGTGAAGCCCGTAGTTGCATCGACTCTAATTGGAGATAAAGCAGCTTCTTTAGACCAAACTTCAGCTTTTAAGACTTCACAAGTCAACGACAAATCACCTTTTCTACAAGAATCAAGAGGTGTCCTCAACCATTCAAACCATGAGGTCCTTGAATCAAACAGTAGAAAATTTCATCTTTGTGAAACTGTTCTAATTGAATCTACTTCATTCTTATGCTTCTATATTTATCTTCTTCAAAATTCTGATATTCATACATTGGGTAACGTACATGTTTCCGAAAGAGATACAGAGCTCAACCCCCAGATAAAAGTGATGGAGGGTCTTGTTTAG 3531 43.59 MTNVRNDPILKMETTCGTLLHELQIIWDEVGESEATRDKMLLEVEQECLEVYRRKVDQANRFRAQLRQAIADSEAELAAICSAMGERPVHTRQADQKTGTLREEMARVLPQVDEMRKRKVDRRNQILEVLEQIQKISYEIYGSKFSHSSVAIDENDLSLRKLEELQGQLHTLQKEKSDRQMVVQEHLQTLNLLCSVLGMDFKQTVNGFHPNLGDPDGTFNITSESIETLAAAIINLREVKLRRMQRLQDLATTLLELWNLMDTPMEEQQLFQNVTCNIAASEDEVNEPNSLSVDSINSVEAEVSRLEELKSSKMKELVLKKRSELDEICRKTHLVLEEDTIVEYAIETIDSGDVDSAIILEQIELQIARIKEEAFVRKEILEKVEKWLTACDEECWLEEYNRDENRYNAGRGAHLILKRAEKARALVNKLPGMVDALTSKTMAWEKERGIEFTYDGVSLLSMLEEYSVLRQEKEQERRRLRDQKKLQGQLIAEQEALYGSKPSPSKPQSVKKASRASAAGANSKRLSLGGTLHQTPKPDPIHKATPQSRPSRKGDHLNDQNYDEGFGALPIAGRRELDFSGQPPSHNNSLANAREQPELGIRKPFAPIATTVQPKTNTTNSINDANTASSEPLQKTSPTSNVPFTPLKKISVATDEDQNMTPKAMSIPVPSTPSTLSVAMQTTTTPAVALPPPAFKAEEIPEDNVEYSFEERRAGFWISSHFNWLCFCVLVSLSSSLRASSCCCGLLSIVCRVNNGGLGFKVSVYRLCTFALEHIFFFSVTVKMEEKEGGVDFGFAVKVSQAPESFGMMDSRPENSSTDGDTPPPQPPASVPTAGATDGKKRRGRPRKYGPDGTVAPTLSPMPISSSIPLTGEFPGWKRGRGRSVESIKKSRKFEYEIPGNKVAFFAGADFTPHVITVNIGEDVNLKVMSFSQQGSRAICILSANGMVSNVTLRQSTSSGGTLTYEGRFEILSLSGSYMPSEIGGTKSRSGGMSVSLAGPDGRVMGGGLAGMLIAAGPVQVVVGSFLPPGHQQENKPKKNRMEPTSNTNLPPANVLSGEGTKEVLGGVKPVVASTLIGDKAASLDQTSAFKTSQVNDKSPFLQESRGVLNHSNHEVLESNSRKFHLCETVLIESTSFLCFYIYLLQNSDIHTLGNVHVSERDTELNPQIKVMEGLV 1176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5108335 5122339 + CmPI595203_01g004950.1 Cmu01g0495 406001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g0495 1176 MobiDBLite consensus disorder prediction 1027 1057 - -
Cmu01g0495 1176 MobiDBLite consensus disorder prediction 546 560 - -
Cmu01g0495 1176 Coils Coil 459 486 - -
Cmu01g0495 1176 CDD DUF296 912 1026 IPR005175 -
Cmu01g0495 1176 FunFam AT-hook motif nuclear-localized protein 1-like 913 1044 - -
Cmu01g0495 1176 Pfam Plants and Prokaryotes Conserved (PCC) domain 913 1026 IPR005175 -
Cmu01g0495 1176 Coils Coil 296 316 - -
Cmu01g0495 1176 Coils Coil 49 76 - -
Cmu01g0495 1176 Coils Coil 155 175 - -
Cmu01g0495 1176 ProSiteProfiles PPC domain profile profile. 908 1047 IPR005175 -
Cmu01g0495 1176 FunFam 65-kDa microtubule-associated protein 6 367 500 - -
Cmu01g0495 1176 MobiDBLite consensus disorder prediction 613 645 - -
Cmu01g0495 1176 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 508 - -
Cmu01g0495 1176 MobiDBLite consensus disorder prediction 501 516 - -
Cmu01g0495 1176 SUPERFAMILY AF0104/ALDC/Ptd012-like 910 1042 - -
Cmu01g0495 1176 Gene3D - 366 500 - -
Cmu01g0495 1176 MobiDBLite consensus disorder prediction 806 882 - -
Cmu01g0495 1176 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 6 608 IPR007145 GO:0000226(InterPro)|GO:0000226(PANTHER)|GO:0005737(PANTHER)|GO:0005819(PANTHER)|GO:0008017(InterPro)|GO:0008017(PANTHER)
Cmu01g0495 1176 Gene3D - 913 1043 - -
Cmu01g0495 1176 MobiDBLite consensus disorder prediction 493 566 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0495 Cmu-Chr1:5108335 Cmu05g0837 Cmu-Chr5:7562881 1.20E-88 dispersed
Cmu01g0656 Cmu-Chr1:7407964 Cmu01g0495 Cmu-Chr1:5108335 2.60E-130 transposed
Cmu05g0839 Cmu-Chr5:7568446 Cmu01g0495 Cmu-Chr1:5108335 1.50E-243 transposed
Cmu08g0951 Cmu-Chr8:21820691 Cmu01g0495 Cmu-Chr1:5108335 3.90E-120 transposed
Cmu10g1308 Cmu-Chr10:5986423 Cmu01g0495 Cmu-Chr1:5108335 4.70E-131 transposed
Cmu11g1323 Cmu-Chr11:25431456 Cmu01g0495 Cmu-Chr1:5108335 1.50E-118 transposed
Cmu01g0495 Cmu-Chr1:5108335 Cmu05g0282 Cmu-Chr5:2403443 1.50E-19 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g0495 K16732 - csv:101215212 1238.79