Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g0687 ATGAATGGAGATGTAGCTCCGGCCGCCGCTCCGGCGGGCTCAGCCGAGTCCCAGTACGTCAGGGCTAAGACTTCTGTATGGTGGGACATCGAGAACTGTCAGGTCCCTAAGGGCTGCGATCCTCACGCCATCGCACAAAACATCAGTTCCGCCCTCGTTAAGATCAACTATTGCGGCCCTGTTTCCATTTCCGCTTATGGAGACACTAATCGCATTCCCAATTCTATTCAGCAAGCTCTTTCCAGTACTGGCATCGCCTTGAATCATGTCCCTGCCGGTGTTAAAGATGCAAGTGACAAGAAGATTCTAGTCGATATGTTGTTTTGGGCAGTTGATAACCCTGCTCCTGCAAATTATTTGCTAATTTCCGGTGATAGGGATTTTTCTAACGCACTTCATCAATTAAGAATGAGAAGATATAATATTCTTCTTGCACAGCCACAAAAGGCTTCTGCACCACTAGTTGCAGCAGCAAAGAGTATTTGGCTTTGGATGAGTCTTGTAGCTGGAGGACCCCCAATGTCCAGTGCTGAATCATCTCAACTTGTGAATGGTATCCTTACTTCTGACCCGCAAATATCACAGGGCTCTGGATTTGATCACAATCAGCAGACAGGACAAGCTATAGTATATAAATCTGAAAATGTCTCTTTGGGAAACCAAAGATCGTATTCTACTGAGAGGATGGGCGACAACAAGCATAAAGGTAAATATATACAGAAAAGCTCCAACCAACCAGTCCTATCCAGAGCTTTAAGCTCACCTGTTTCTATGCAAGAGAAAAACCCTAATTTTTTAAACCAACCGAATCATATGCAAGCAAAGCAGTTTAAGAAAGCACCCCATGAATTCTTTGGTAATAGCAATCCTATAGCCTCTTCTAGTCAGTCTACTCCAACCCCGTTTATTGAAAATTCCAGTCATGCTAGGACTGATGGCAATGTTCCAATGGGTAGTTCCTCGAGTTACCAACCTCCTCACATGGGTCTTGCTAGGACTGATGGCAATATGTCAATGGGTAGTTCTTCAAGTTACCAACCTCCCCACATGAGGCAAAACAACATGCAGCTCCATCCTCCTTTTCGTCCAGATAATGTTTTTCCTCCTAACTCCCTTAATCATAATTCTTTTCCAGTCCCTGGTCAACCTGATCTCTCTGCACCCAATATTAGTAAGCTACATATCTCTGATTATCCCAATTATGCTATAAATCCACAAAATTTCCATCATCAAGCTGGTGAATTTAGACCACATACCAAGTCTCAAAATCCAAACTTTAATTCACCAGACAAAGGCCGTAGTCAGCATGGTGGCCATTCATTCCATCATGATGCATTGAATAAAAGACATGCTCGTGATGTAGTAGAGTATACACCTCATTCATCTTCTACCACTGTTACTAGAAGTTTATCTTATAATGATGCCTGGGGATCTCAGGGGCAACCCCCACCTTCGGAGTACATTCAAGGCCTTATTGGAGTTATTCTTCTTGCATTAAACACCCTGAAAACAGAAAAAATTATGCCAACTGAGGCAAATATAGCTGACTGCATCCGATATGGAGATTTGAGAAACAGCAATACTGATGTAAAAATGGCACTAGATAGTGCGATAGAGCATAATATGGTAGTGAAGCAGAATTTAGGAGCAGTGCAATTGTATGTTGGTAAAACAGAAAAACTGTGGAAGTGTGTGAACCCTCTAGGTGGGCATCCTAATCAATACCAAAAAGCTATATGGGATAAGATTCATAATTGTTTAGCTTCTCCAGCTGGTCGATCTGCAATAATGGCCTCTCGTTGCAGATATGAAGCAGCATTGATTCTGAAGAAAGAATGCTTAACAGATTTTGCCTTGGGCGATGTGCTTCAGATTTTGAATATGATAACCTCAATGAAGAAATGGATTACTCATCACATTTCAGGATGGCAGCCAATTAATATTATGCTAACAGAAGTTAACACAGATGCAAGTTCAAGAACTGAACTTGATTGA 1995 42.06 MNGDVAPAAAPAGSAESQYVRAKTSVWWDIENCQVPKGCDPHAIAQNISSALVKINYCGPVSISAYGDTNRIPNSIQQALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSIWLWMSLVAGGPPMSSAESSQLVNGILTSDPQISQGSGFDHNQQTGQAIVYKSENVSLGNQRSYSTERMGDNKHKGKYIQKSSNQPVLSRALSSPVSMQEKNPNFLNQPNHMQAKQFKKAPHEFFGNSNPIASSSQSTPTPFIENSSHARTDGNVPMGSSSSYQPPHMGLARTDGNMSMGSSSSYQPPHMRQNNMQLHPPFRPDNVFPPNSLNHNSFPVPGQPDLSAPNISKLHISDYPNYAINPQNFHHQAGEFRPHTKSQNPNFNSPDKGRSQHGGHSFHHDALNKRHARDVVEYTPHSSSTTVTRSLSYNDAWGSQGQPPPSEYIQGLIGVILLALNTLKTEKIMPTEANIADCIRYGDLRNSNTDVKMALDSAIEHNMVVKQNLGAVQLYVGKTEKLWKCVNPLGGHPNQYQKAIWDKIHNCLASPAGRSAIMASRCRYEAALILKKECLTDFALGDVLQILNMITSMKKWITHHISGWQPINIMLTEVNTDASSRTELD 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7771125 7774156 + CmPI595203_01g006870.1 Cmu01g0687 406193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g0687 664 Pfam OST-HTH Associated domain 599 655 IPR025677 -
Cmu01g0687 664 MobiDBLite consensus disorder prediction 222 247 - -
Cmu01g0687 664 MobiDBLite consensus disorder prediction 292 375 - -
Cmu01g0687 664 MobiDBLite consensus disorder prediction 292 327 - -
Cmu01g0687 664 Pfam NYN domain 23 159 IPR021139 GO:0004540(InterPro)
Cmu01g0687 664 CDD PIN_limkain_b1_N_like 23 147 - -
Cmu01g0687 664 MobiDBLite consensus disorder prediction 413 442 - -
Cmu01g0687 664 PANTHER LIMKAIN B LKAP 14 561 IPR024768 GO:0005777(InterPro)|GO:0010468(InterPro)
Cmu01g0687 664 Gene3D - 16 165 - -
Cmu01g0687 664 MobiDBLite consensus disorder prediction 335 353 - -
Cmu01g0687 664 MobiDBLite consensus disorder prediction 417 434 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0687 Cmu-Chr1:7771125 Cmu02g0077 Cmu-Chr2:813920 6.60E-36 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g0687 - - - 0.0